WERAM Information

Tag Content
WERAM ID WERAM-Gaa-0013
Ensembl Protein ID ENSGACP00000001573.1
Gene Name prdm2b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGACG00000001208.1 ENSGACT00000001574.1 ENSGACP00000001573.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT RIZ 1.50e-40 138.4 30 140
Organism Gasterosteus aculeatus
Domain Profile
  HMT RIZ
               RIZ.txt   3 velaessipkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLa 91 
                           ++l +s+i++ ++gv+a+++i+kg++fGPfvGekk++++v  n    ++we++      +++vDa+d+ k+nWlryvn+Ars eeqNL+
  ENSGACP00000001573.1  30 LKLGPSAINQSRVGVWATQSIPKGQRFGPFVGEKKKRSQVTSNV---YMWEVY-FPARGWMCVDATDPAKGNWLRYVNWARSGEEQNLF 114
                           57889**********************************99998...******.9999******************************* PP
               RIZ.txt  92 alqineqifYktikdIepdeELLvwy 117
                           +l+in++i+Y+++++I p+eELLvwy
  ENSGACP00000001573.1 115 PLEINKAIYYNVLRPIGPGEELLVWY 140
                           ************************** PP
Protein Sequence
(Fasta)		VLQNMAIIGG KVENLEEIPS HVWKSLPDCL KLGPSAINQS RVGVWATQSI PKGQRFGPFV 60
GEKKKRSQVT SNVYMWEVYF PARGWMCVDA TDPAKGNWLR YVNWARSGEE QNLFPLEINK 120
AIYYNVLRPI GPGEELLVWY TVEDNPEITA ALEEERASSL SRKTPPGAKR ENNAQMHNYN 180
ILNMLQQLKG SVTKSTFNEM WDGEEGPKEE DERPSAVGPS QQLQQTLPIR STERSSLEDM 240
SIVMTQGGNG KEEDAEDLEA ALQQQAAQRL PAADSVQSKQ PGSSLTFPEE SHKEPRGQVE 300
SSSLAGQEPR VDPDPDLDPD PDGDLEGDPH GESYPCQHCE RHFSTRQGLE RHIHIHAITS 360
QQTQLFKCRY CSKSFGSQVG RRRHERRHES GLKKRPGSLA GTASLLSPVM LTDASSPDCT 420
SPTSQCTAIG SQFTGGPSLH KSEMQNENGE SKELHPCKYC NKAFGTHTNM RRHQRRIHER 480
HLLPKGVRRK GMLLQEASVP KKQQQPDESP STSPPPVYVP SADTEDEVDR DDYAVDISKN 540
ISENLSFYID GKIVSTSSVS SCEVIEVDSR SAALFGLDRV IIGPNQISQA LKADGRTSAA 600
KQISSLGQPA AKRRTSTPPF VPSLKVETES ASLAASSSSS SSSTSSSSNL LVAFQREKTV 660
YLSPKLKQLL QTQDIQKSTI ALITESHRLA SPLSVTQLPG ASGRFKRRTS SPPSSPQLSP 720
ACKTESCKSE AAGSFALKVP KLESLTALPR GSLPEKEDED SPNPSDNNTH GQTSSNSGGN 780
SCNQQPLDLS NSVSRCQDSS VKVLGDSALD LSFHRKSNVE PESKGGPAPQ PLVKKRKPNT 840
SMLEKVLMND YLGLPPPGEE GSSALANLSC YNSRSPSIAT ESAHPSPPSL TPVTMNPSSP 900
GNCSVTSPTP PPPLLPTILS PPAMPGSPLS QPSDSTSQRP LPILSPKMSP SPPAPAAEDL 960
AAAEDNVSLA ASSVTLANGK MNQNDDSVTE ESPSALTPQP ESSSSSSPTP ASHEPSPSLP 1020
SRSFPPIKIK EEPQPGAAPR EQPSDKTSEA EGGDSTYCKT FVCNVCEEPF DSIKELSGHI 1080
AEHAADWPFK CEFCVQLFGD APALLAHRTA LHGVGRIFVC SVCSKEFAFL CNLEQHQKDS 1140
HPAETCSHTA VESGKLRPQN YTDPSRAKEE SSPSTPEEPG VNGDHAEEGA EDPNEELYTT 1200
IKIMASEGGK PKPPDVRLGI NQHYPSYKPP PFPYHSRSHA GSVASATNFT THNIPQTFST 1260
AIRCTKCGNS FDNMPELHKH ILACASASDK KRYTPKKNPI TLKEIVKSPN GVAAPAAAAA 1320
GHSPFRRMGQ PKRLNFNQDT NGKTKMSALS KKKNQLVQKA ISQKNKAATT AKKTPVKEEE 1380
QASNACPHCS REFTYPASLS KHMAFSCPMK PVVKRGKKGL AEVKKEGASA GDKNLKLRKK 1440
ASDCDAAQTE AEPKQLGKTR ARSSGAAEPE PPQASRGKAA GAPGRLKRPA SFPASVSASK 1500
KTKKGQFQSL PPTPSAPDTP GDGAQHRPAM RMQRLGKEAP PKRSAEAKSP PPPPQQQLKK 1560
EERFSLRMRE RVGGPVTRSL QMVTAAPSVD VKTEE 1595
Nucleotide Sequence
(Fasta)		GTATTGCAGA ACATGGCGAT CATCGGAGGG AAAGTGGAAA ATCTGGAGGA AATTCCAAGT 60
CATGTGTGGA AGAGTTTACC CGACTGTTTG AAACTTGGAC CTTCTGCTAT AAATCAAAGC 120
CGCGTGGGCG TCTGGGCCAC TCAGTCCATC CCAAAAGGCC AGAGGTTTGG TCCATTTGTT 180
GGGGAGAAGA AAAAAAGGTC CCAGGTGACC AGCAACGTGT ACATGTGGGA GGTTTACTTC 240
CCAGCAAGGG GCTGGATGTG TGTTGACGCC ACAGACCCCG CCAAGGGGAA CTGGCTGCGA 300
TACGTGAACT GGGCACGCTC TGGTGAAGAG CAGAATCTTT TCCCCCTGGA GATCAACAAA 360
GCCATTTACT ACAATGTTTT ACGGCCTATC GGGCCGGGCG AGGAGCTGCT GGTGTGGTAC 420
ACTGTCGAAG ACAACCCTGA GATAACAGCT GCACTGGAGG AAGAAAGAGC CAGCAGCCTG 480
AGCAGGAAAA CTCCACCCGG GGCGAAGCGA GAAAATAATG CTCAGATGCA CAATTACAAT 540
ATTCTTAACA TGTTACAACA ATTGAAAGGA AGCGTAACCA AATCTACTTT CAACGAGATG 600
TGGGATGGAG AAGAAGGTCC GAAAGAGGAG GACGAGAGGC CGTCAGCCGT AGGACCCTCA 660
CAGCAACTCC AGCAAACCCT TCCCATTAGA AGCACTGAAC GTAGCAGTTT AGAGGACATG 720
TCAATAGTGA TGACTCAAGG GGGAAATGGG AAAGAGGAGG ATGCTGAGGA TTTGGAGGCT 780
GCCTTACAAC AGCAAGCCGC TCAGCGTTTA CCTGCGGCTG ATTCCGTGCA AAGCAAACAG 840
CCGGGCTCGT CGCTGACGTT CCCCGAAGAA AGCCATAAGG AGCCACGGGG GCAGGTTGAG 900
TCGTCCTCGC TCGCGGGACA GGAACCACGG GTTGATCCCG ATCCCGATCT CGACCCGGAC 960
CCGGATGGTG ACCTCGAGGG CGACCCCCAC GGAGAGTCGT ATCCCTGCCA ACACTGCGAG 1020
CGCCACTTCT CCACCAGGCA GGGTCTGGAG CGTCACATAC ACATCCACGC CATCACCAGC 1080
CAGCAAACGC AACTGTTCAA GTGCCGTTAC TGCAGTAAAT CCTTTGGCTC GCAGGTGGGG 1140
CGGAGGCGGC ACGAGAGGCG GCATGAGAGC GGGCTAAAGA AAAGGCCCGG CTCTCTGGCG 1200
GGCACCGCCA GTCTGCTCAG TCCGGTGATG CTGACCGATG CTTCAAGTCC CGACTGCACC 1260
AGCCCGACGA GTCAGTGCAC AGCCATAGGT TCCCAGTTTA CTGGAGGACC ATCTCTGCAT 1320
AAGTCTGAGA TGCAGAATGA AAACGGGGAG TCAAAGGAAC TCCATCCTTG CAAGTATTGT 1380
AATAAAGCGT TTGGCACACA CACAAACATG CGTCGACACC AACGTAGAAT ACATGAACGG 1440
CACTTATTAC CAAAGGGAGT TCGCAGGAAA GGCATGCTGC TCCAGGAGGC CTCAGTGCCG 1500
AAAAAGCAGC AGCAGCCAGA CGAGTCACCT AGCACCAGCC CGCCGCCAGT CTATGTGCCC 1560
AGCGCGGACA CCGAAGACGA GGTGGACAGG GATGATTACG CAGTCGACAT ATCCAAAAAC 1620
ATCTCTGAGA ATTTGAGCTT CTACATTGAC GGCAAGATTG TGTCCACCAG TTCAGTGAGC 1680
AGCTGCGAGG TGATAGAAGT GGACTCCAGG TCTGCGGCTC TGTTCGGCCT GGACAGGGTC 1740
ATCATCGGTC CAAACCAGAT CAGTCAGGCG CTGAAGGCGG ACGGACGGAC CAGTGCGGCG 1800
AAGCAAATCT CCAGCCTCGG GCAGCCGGCT GCAAAAAGAA GAACATCCAC CCCCCCATTT 1860
GTCCCCAGCC TCAAAGTCGA GACTGAGTCG GCGTCGCTCG CCGCCTCTTC GTCGTCTTCA 1920
TCATCCTCTA CATCTTCCTC ATCCAACCTG TTAGTTGCGT TTCAACGAGA GAAAACGGTT 1980
TATCTCTCAC CAAAGCTCAA ACAGCTCCTT CAGACACAAG ACATTCAGAA GTCAACCATC 2040
GCCCTGATAA CAGAAAGCCA TAGATTGGCC TCGCCGCTGT CCGTCACGCA GCTTCCAGGG 2100
GCTTCGGGCA GGTTCAAAAG AAGAACGTCC TCGCCCCCTT CATCTCCGCA ACTCAGTCCT 2160
GCATGTAAAA CGGAGAGCTG TAAATCCGAG GCGGCGGGCT CATTCGCCCT AAAGGTGCCA 2220
AAGCTGGAAA GCCTCACTGC GTTGCCTCGT GGGAGCCTCC CGGAGAAAGA AGATGAAGAC 2280
AGCCCGAACC CGTCTGACAA CAATACGCAC GGCCAAACCT CATCGAACAG CGGTGGAAAC 2340
TCGTGCAATC AGCAGCCGTT GGATCTGTCC AACTCTGTCA GCAGGTGCCA GGACAGCTCG 2400
GTCAAGGTGC TTGGAGACTC GGCCCTTGAT TTGAGCTTCC ATCGGAAGAG CAACGTCGAG 2460
CCTGAATCGA AGGGAGGTCC GGCGCCGCAG CCACTGGTAA AAAAGAGAAA GCCAAACACG 2520
AGCATGCTCG AGAAGGTGCT TATGAATGAT TATCTAGGTC TGCCGCCTCC AGGAGAGGAG 2580
GGCTCCTCGG CCTTAGCAAA TCTGAGTTGT TACAATTCGC GCTCCCCGAG CATCGCCACG 2640
GAGTCCGCCC ACCCCTCTCC CCCCTCCCTG ACCCCCGTCA CCATGAACCC CTCTTCGCCC 2700
GGTAACTGCA GCGTAACGTC CCCGACGCCG CCACCGCCTC TACTACCTAC CATACTGTCT 2760
CCTCCGGCTA TGCCCGGCTC CCCTCTTTCT CAGCCTTCAG ACTCGACGTC CCAGAGACCT 2820
CTGCCCATCC TCTCGCCGAA AATGTCTCCC AGCCCCCCTG CGCCGGCAGC GGAAGATCTG 2880
GCCGCCGCGG AAGACAACGT TTCTCTCGCC GCTAGTTCCG TCACGTTGGC AAACGGCAAA 2940
ATGAACCAAA ACGATGACTC GGTAACAGAG GAATCTCCTT CTGCCCTCAC GCCGCAGCCA 3000
GAGTCCTCCT CCTCCTCTTC TCCTACACCC GCGTCTCATG AACCGTCCCC GTCACTGCCT 3060
TCACGGTCCT TCCCTCCGAT CAAGATAAAA GAGGAGCCTC AGCCCGGCGC AGCGCCTCGG 3120
GAGCAACCGT CTGATAAAAC CTCTGAAGCA GAGGGAGGCG ACTCGACGTA CTGCAAGACC 3180
TTTGTGTGCA ACGTCTGCGA GGAGCCGTTC GACTCCATCA AAGAGCTCAG CGGACACATC 3240
GCGGAGCACG CTGCCGATTG GCCCTTCAAA TGTGAGTTCT GCGTGCAGCT GTTTGGTGAC 3300
GCTCCGGCCC TGCTGGCTCA CCGGACGGCG CTGCACGGAG TGGGCAGGAT TTTCGTGTGC 3360
TCAGTTTGTT CAAAGGAGTT TGCCTTCCTC TGTAACCTGG AGCAGCACCA GAAGGATTCG 3420
CATCCCGCCG AGACGTGTTC ACACACCGCT GTGGAAAGTG GCAAGCTCAG GCCACAGAAC 3480
TACACGGATC CGTCCAGAGC CAAAGAGGAG AGCAGTCCGT CAACACCGGA GGAGCCCGGC 3540
GTTAACGGTG ACCACGCGGA GGAGGGGGCG GAGGATCCCA ACGAGGAGCT GTACACTACA 3600
ATAAAGATAA TGGCCTCGGA AGGGGGGAAG CCCAAACCCC CGGACGTTCG CCTGGGCATC 3660
AACCAACACT ACCCCAGCTA CAAACCGCCG CCGTTTCCTT ACCACAGCCG CTCCCACGCC 3720
GGCTCGGTGG CCTCGGCTAC CAACTTCACC ACCCACAACA TCCCGCAGAC CTTCAGCACC 3780
GCCATACGCT GCACCAAGTG CGGCAACAGC TTTGACAACA TGCCCGAACT GCACAAGCAC 3840
ATTTTGGCCT GTGCCAGTGC CAGCGACAAG AAGCGCTACA CGCCCAAGAA AAACCCCATC 3900
ACCCTCAAGG AGATAGTGAA GAGTCCAAAC GGTGTCGCGG CCCCCGCGGC GGCTGCCGCA 3960
GGCCACAGTC CTTTCCGAAG AATGGGGCAG CCGAAGAGGC TTAACTTTAA CCAAGACACC 4020
AACGGGAAAA CAAAAATGAG CGCCCTTAGT AAGAAGAAAA ATCAGCTTGT CCAGAAGGCA 4080
ATTTCACAAA AAAATAAAGC CGCCACCACT GCAAAGAAGA CTCCGGTTAA AGAGGAAGAG 4140
CAGGCCTCTA ACGCTTGCCC CCACTGCAGT CGCGAGTTCA CCTACCCTGC AAGCCTCAGC 4200
AAACACATGG CCTTCAGCTG TCCCATGAAA CCTGTGGTTA AACGGGGCAA GAAAGGCCTG 4260
GCGGAGGTGA AAAAAGAGGG GGCGTCGGCG GGGGACAAAA ACCTCAAGCT CAGAAAGAAA 4320
GCCTCGGACT GTGACGCGGC GCAGACAGAG GCGGAGCCCA AACAGCTCGG AAAGACCAGG 4380
GCTCGTAGCT CCGGTGCGGC GGAGCCCGAA CCCCCCCAGG CGAGCAGAGG AAAAGCCGCC 4440
GGCGCGCCGG GCAGACTGAA GAGGCCCGCC TCGTTCCCGG CATCCGTTTC TGCCAGCAAA 4500
AAAACAAAGA AGGGCCAATT TCAGTCACTA CCTCCCACCC CGTCGGCCCC CGACACTCCC 4560
GGTGACGGCG CACAACACCG GCCGGCCATG AGAATGCAGC GTTTGGGCAA AGAGGCCCCT 4620
CCTAAGAGAT CGGCCGAGGC CAAATCGCCG CCGCCGCCTC CACAACAACA GCTGAAGAAG 4680
GAGGAGCGGT TCTCCCTTCG AATGAGGGAG AGAGTAGGTG GTCCAGTCAC CAGGAGCTTA 4740
CAAATGGTCA CCGCCGCTCC TTCTGTCGAC GTGAAGACAG AAGAG 4786
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0043 ENSONIP00000004947.1 Oreochromis niloticus 69 0.0 1845
WERAM-Tar-0175 ENSTRUP00000037071.1 Takifugu rubripes 67 0.0 1737
WERAM-Xim-0213 ENSXMAP00000017089.1 Xiphophorus maculatus 68 0.0 1296
WERAM-Ten-0181 ENSTNIP00000017818.1 Tetraodon nigroviridis 71 0.0 732
WERAM-Dar-0174 ENSDARP00000098393.2 Danio rerio 52 0.0 731
WERAM-Orla-0041 ENSORLP00000004978.1 Oryzias latipes 72 0.0 728
WERAM-Pof-0174 ENSPFOP00000024474.1 Poecilia formosa 71 0.0 712
WERAM-Lac-0030 ENSLACP00000005070.2 Latimeria chalumnae 43 2e-157 555
WERAM-Fia-0122 ENSFALP00000010367.1 Ficedula albicollis 50 2e-134 478
WERAM-Anp-0137 ENSAPLP00000014610.1 Anas platyrhynchos 49 1e-133 475
WERAM-Cap-0158 ENSCPOP00000013075.2 Cavia porcellus 51 2e-130 465
WERAM-Dio-0121 ENSDORP00000011807.1 Dipodomys ordii 49 2e-130 465
WERAM-Tut-0059 ENSTTRP00000004738.1 Tursiops truncatus 52 3e-129 461
WERAM-Gaga-0044 ENSGALP00000006497.4 Gallus gallus 48 5e-129 460
WERAM-Meg-0061 ENSMGAP00000005838.2 Meleagris gallopavo 47 6e-129 460
WERAM-Ect-0043 ENSETEP00000004327.1 Echinops telfairi 48 3e-128 457
WERAM-Loa-0113 ENSLAFP00000010222.3 Loxodonta africana 51 4e-127 454
WERAM-Myl-0079 ENSMLUP00000006376.2 Myotis lucifugus 51 1e-126 452
WERAM-Soa-0065 ENSSARP00000006475.1 Sorex araneus 56 4e-126 451
WERAM-Dan-0095 ENSDNOP00000010065.3 Dasypus novemcinctus 57 2e-125 449
WERAM-Mod-0102 ENSMODP00000035055.3 Monodelphis domestica 55 3e-125 448
WERAM-Sah-0163 ENSSHAP00000017120.1 Sarcophilus harrisii 53 4e-125 447
WERAM-Ptv-0104 ENSPVAP00000009366.1 Pteropus vampyrus 50 7e-125 446
WERAM-Chs-0010 ENSCSAP00000017181.1 Chlorocebus sabaeus 58 4e-124 444
WERAM-Poa-0014 ENSPPYP00000002150.2 Pongo abelii 58 1e-123 442
WERAM-Ran-0182 ENSRNOP00000046011.3 Rattus norvegicus 57 1e-123 442
WERAM-Hos-0094 ENSP00000312352.5 Homo sapiens 57 1e-123 442
WERAM-Gog-0062 ENSGGOP00000005565.2 Gorilla gorilla 57 2e-123 442
WERAM-Eqc-0052 ENSECAP00000006928.1 Equus caballus 57 3e-123 441
WERAM-Mum-0203 ENSMUSP00000101404.1 Mus musculus 57 6e-123 440
WERAM-Prc-0128 ENSPCAP00000011552.1 Procavia capensis 59 8e-123 439
WERAM-Ocp-0072 ENSOPRP00000006314.1 Ochotona princeps 50 2e-122 438
WERAM-Xet-0166 ENSXETP00000029499.3 Xenopus tropicalis 46 2e-121 435
WERAM-Ova-0117 ENSOARP00000011454.1 Ovis aries 57 4e-121 434
WERAM-Mae-0058 ENSMEUP00000005635.1 Macropus eugenii 54 1e-118 426
WERAM-Mim-0159 ENSMICP00000016213.1 Microcebus murinus 65 9e-105 380
WERAM-Bot-0175 ENSBTAP00000027387.5 Bos taurus 44 3e-77 288
WERAM-Mam-0159 ENSMMUP00000025737.2 Macaca mulatta 63 9e-66 250
WERAM-Fec-0210 ENSFCAP00000022446.1 Felis catus 69 2e-64 246
WERAM-Caj-0142 ENSCJAP00000025355.2 Callithrix jacchus 64 4e-54 211
WERAM-Paa-0092 ENSPANP00000006501.1 Papio anubis 42 6e-22 105
WERAM-Pes-0005 ENSPSIP00000002371.1 Pelodiscus sinensis 40 2e-21 103
WERAM-Pem-0083 ENSPMAP00000008984.1 Petromyzon marinus 42 3e-21 102
WERAM-Orc-0206 ENSOCUP00000023211.2 Oryctolagus cuniculus 40 2e-20 100
WERAM-Otg-0200 ENSOGAP00000015635.1 Otolemur garnettii 34 4e-20 99.0
WERAM-Ora-0057 ENSOANP00000008625.2 Ornithorhynchus anatinus 36 4e-20 99.0
WERAM-Sus-0183 ENSSSCP00000023246.1 Sus scrofa 37 2e-19 96.7
WERAM-Mup-0073 ENSMPUP00000006803.1 Mustela putorius furo 37 3e-19 96.3
WERAM-Chh-0045 ENSCHOP00000005073.1 Choloepus hoffmanni 40 6e-19 94.7
WERAM-Caf-0042 ENSCAFP00000005506.3 Canis familiaris 40 7e-19 94.7
WERAM-Anc-0054 ENSACAP00000005392.3 Anolis carolinensis 40 1e-18 94.0
WERAM-Aim-0022 ENSAMEP00000001535.1 Ailuropoda melanoleuca 37 2e-18 92.8
WERAM-Leo-0172 ENSLOCP00000020417.1 Lepisosteus oculatus 39 6e-18 91.7
WERAM-Asm-0040 ENSAMXP00000005078.1 Astyanax mexicanus 40 8e-18 91.3
WERAM-Gam-0040 ENSGMOP00000004090.1 Gadus morhua 37 1e-17 90.9
WERAM-Vip-0114 ENSVPAP00000010581.1 Vicugna pacos 39 2e-17 90.1
WERAM-Nol-0147 ENSNLEP00000016062.1 Nomascus leucogenys 38 3e-17 89.4
WERAM-Ict-0141 ENSSTOP00000014774.2 Ictidomys tridecemlineatus 38 3e-17 89.4
WERAM-Pat-0154 ENSPTRP00000031523.3 Pan troglodytes 38 3e-17 89.4
WERAM-Tub-0028 ENSTBEP00000003557.1 Tupaia belangeri 38 3e-17 89.0
WERAM-Tas-0102 ENSTSYP00000010720.1 Tarsius syrichta 39 2e-16 86.3
WERAM-Tag-0147 ENSTGUP00000012569.1 Taeniopygia guttata 37 5e-16 85.1
WERAM-Ere-0093 ENSEEUP00000009413.1 Erinaceus europaeus 35 6e-14 78.6
Created Date 25-Jun-2016