WERAM Information
Tag | Content | ||||||||||||
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WERAM ID | WERAM-Hos-0133 | ||||||||||||
Ensembl Protein ID | ENSP00000264808.3 | ||||||||||||
Uniprot Accession | Q9NQX1; PRDM5_HUMAN; Q0VAI9; Q0VAJ0; Q6NXQ7 | ||||||||||||
Genbank Protein ID | NP_001287752.1; NP_001287753.1; NP_061169.2 | ||||||||||||
Protein Name | PR domain zinc finger protein 5 | ||||||||||||
Genbank Nucleotide ID | NM_001300823.1; NM_001300824.1; NM_018699.3 | ||||||||||||
Gene Name | PRDM5;BCS2;PFM2 | ||||||||||||
Ensembl Information |
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Details |
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Status | Reviewed | ||||||||||||
Classification |
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Organism | Homo sapiens | ||||||||||||
NCBI Taxa ID | 9606 | ||||||||||||
Functional Description (View) |
Sequence-specific DNA-binding transcription factor. Represses transcription at least in part by recruitment of the histone methyltransferase EHMT2/G9A and histone deacetylases such as HDAC1. Regulates hematopoiesis-associated protein-coding and microRNA (miRNA) genes. May regulate the expression of proteins involved in extracellular matrix development and maintenance, including fibrillar collagens, such as COL4A1 and COL11A1, connective tissue components, such as HAPLN1, and molecules regulating cell migration and adhesion, including EDIL3 and TGFB2. May caused G2/M arrest and apoptosis in cancer cells. | ||||||||||||
Domain Profile | HMT RIZ RIZ.txt 2 evelaessipkeglgvyakkkiekgekfGPfvGekkileeveenanekliweisedkgevkyivDasdeeksnWlryvnvArskeeqNLaal 93 |
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Protein Sequence (Fasta) | MLGMYVPDRF SLKSSRVQDG MGLYTARRVR KGEKFGPFAG EKRMPEDLDE NMDYRLMWEV 60 RGSKGEVLYI LDATNPRHSN WLRFVHEAPS QEQKNLAAIQ EGENIFYLAV EDIETDTELL 120 IGYLDSDMEA EEEEQQIMTV IKEGEVENSR RQSTAGRKDR LGCKEDYACP QCESSFTSED 180 ILAEHLQTLH QKPTEEKEFK CKNCGKKFPV KQALQRHVLQ CTAKSSLKES SRSFQCSVCN 240 SSFSSASSFE QHQETCRGDA RFVCKADSCG KRLKSKDALK RHQENVHTGD PKKKLICSVC 300 NKKCSSASSL QEHRKIHEIF DCQECMKKFI SANQLKRHMI THSEKRPYNC EICNKSFKRL 360 DQVGAHKVIH SEDKPYKCKL CGKGFAHRNV YKNHKKTHSE ERPFQCEECK ALFRTPFSLQ 420 RHLLIHNSER TFKCHHCDAT FKRKDTLNVH VQVVHERHKK YRCELCNKAF VTPSVLRSHK 480 KTHTGEKEKI CPYCGQKFAS SGTLRVHIRS HTGERPYQCP YCEKGFSKND GLKMHIRTHT 540 REKPYKCSEC SKAFSQKRGL DEHKRTHTGE KPFQCDVCDL AFSLKKMLIR HKMTHNPNRP 600 LAECQFCHKK FTRNDYLKVH MDNIHGVADS |
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Nucleotide Sequence (Fasta) | GCGCCCCCGC AGCAGGAATG GCAGGAACGG ATCCGGGCCG AGCCCGACCC GGGACGAGGA 60 GGGGCTGAGC CGCGGGGGAT CCTGGAATCG GCAGGGAGGT GGGGATTCTG GGAGGAAAAC 120 TCCATTTCCT CCTTCCCTGC CGGTTTCTCC CCTCTACCCT GGCACCCCAA ATTTCGATGT 180 GCCGCCTGCC GGGCGCTAAG CGCCGGTGTT GAGAGAGGCG GCGGCCGCCG CGCCCGGGAA 240 AATGCTGGGC ATGTACGTGC CGGACAGGTT CTCCCTGAAG TCCTCCCGGG TTCAGGACGG 300 CATGGGGCTC TACACGGCCC GCAGAGTGCG AAAGGGTGAA AAGTTCGGAC CCTTTGCTGG 360 AGAGAAGAGA ATGCCTGAAG ACTTGGATGA AAATATGGAT TACAGGTTGA TGTGGGAGGT 420 TCGTGGGAGT AAGGGAGAAG TTTTGTACAT TTTGGATGCT ACCAACCCAC GGCACTCCAA 480 CTGGCTTCGC TTCGTTCATG AGGCACCATC TCAGGAGCAG AAGAACTTGG CTGCCATTCA 540 AGAAGGAGAA AACATTTTCT ATTTGGCAGT TGAAGATATA GAAACAGACA CGGAGCTTCT 600 GATTGGCTAC CTGGATAGTG ACATGGAGGC TGAGGAGGAA GAACAGCAAA TTATGACAGT 660 CATCAAAGAA GGGGAAGTTG AAAATTCTAG AAGACAATCA ACAGCGGGCA GAAAAGATCG 720 CCTTGGCTGT AAAGAGGACT ATGCTTGTCC TCAATGTGAA TCGAGTTTTA CCAGTGAGGA 780 TATTCTTGCT GAGCATCTCC AGACATTGCA CCAGAAACCC ACAGAGGAGA AAGAATTTAA 840 GTGCAAGAAC TGTGGGAAGA AATTCCCAGT TAAGCAGGCT TTGCAAAGAC ATGTTCTTCA 900 GTGCACAGCG AAAAGCAGTC TAAAGGAGTC TTCGCGAAGT TTTCAGTGCT CTGTTTGCAA 960 TTCTTCCTTC AGTTCAGCAT CGAGTTTTGA GCAGCACCAG GAGACTTGCC GGGGGGATGC 1020 CAGGTTTGTG TGCAAGGCTG ACAGCTGTGG AAAGAGGCTG AAGAGCAAGG ATGCCCTGAA 1080 AAGACACCAG GAAAATGTCC ACACTGGAGA TCCTAAGAAA AAGCTTATAT GTTCAGTGTG 1140 CAATAAAAAG TGTTCTTCAG CATCAAGCCT ACAGGAACAT AGAAAGATTC ATGAGATATT 1200 TGATTGTCAA GAATGTATGA AGAAATTTAT TTCAGCTAAT CAGCTAAAAC GTCATATGAT 1260 CACCCACTCA GAAAAACGAC CCTATAATTG CGAGATTTGT AATAAGTCTT TCAAGAGGCT 1320 TGATCAAGTG GGTGCTCACA AAGTAATACA CAGCGAAGAC AAACCTTACA AATGCAAACT 1380 TTGTGGAAAG GGATTTGCCC ACAGAAATGT TTACAAGAAT CATAAGAAGA CCCACTCTGA 1440 GGAGAGACCG TTCCAATGTG AAGAATGTAA AGCTTTGTTC CGGACCCCAT TTTCTTTACA 1500 GAGACACCTG CTAATACATA ACAGTGAGAG GACTTTCAAG TGCCATCACT GCGATGCTAC 1560 CTTTAAGAGG AAGGATACAT TAAATGTTCA TGTCCAGGTG GTTCATGAAA GACACAAGAA 1620 GTATAGGTGT GAGCTATGTA ATAAGGCCTT TGTTACACCT TCAGTGCTTA GAAGTCATAA 1680 GAAAACACAT ACAGGAGAAA AGGAGAAAAT CTGTCCATAT TGTGGCCAGA AATTTGCCAG 1740 CAGTGGTACA CTCAGAGTTC ATATCCGGAG CCACACAGGT GAGCGTCCCT ATCAATGTCC 1800 TTACTGTGAA AAAGGATTCA GTAAAAATGA TGGACTGAAG ATGCACATTC GTACTCACAC 1860 CAGGGAGAAG CCGTACAAGT GCTCAGAGTG CAGCAAGGCC TTCAGCCAGA AGCGAGGCCT 1920 GGATGAGCAC AAGAGGACGC ACACTGGAGA AAAGCCTTTT CAGTGTGATG TTTGTGATTT 1980 GGCTTTTAGC CTGAAGAAAA TGCTGATTCG ACACAAGATG ACTCATAATC CCAATCGTCC 2040 CCTGGCAGAA TGCCAGTTTT GCCATAAGAA GTTTACAAGG AATGACTACC TCAAAGTGCA 2100 CATGGACAAT ATCCATGGTG TAGCTGACAG CTAATAGGGG CTGTAAAGGA ATTAAACTAT 2160 TCAGAAGGGC TCCTAATATG AATCCCAGAT TTTTATCACC TGATCAGCAT AACAGAAGTA 2220 GCCAAAAGTG ACTTACTGGT CTCATAGTTC TTATTTGCCT ACATTTAGAG TCTGTAGATG 2280 CATATGCAAC CAAAAAAAAG TCTTACTTTT AACAAGAAAT GGTATAAATG GAAAAAAAAT 2340 ACAACTCCAT AGCCTTGCAA AATGCAACTT GTGCTCTGTC TTATAAAAAT GGAGAAAGGA 2400 GTCATGGCTC TCTTTCTTGG CCATCCCTCT GTAATGAAGT TTATAATATA CTTCCCTAAT 2460 AGGCCTTTTT ATTTTATTGT TATTCTTTGT GTGTCTGTGT GTCTGTGTGT CTGTATGTGT 2520 CTGTGTGTGT GCACTCACTT GCAAATGCCA GTTGTTGCAG CTGGTTTTAC CAATTTAAAT 2580 AGAAATAAAT CAAGATATCC AACTATTTCT TTGCAGATGA GGATAAGAAT AAGTTATCAA 2640 AGTCTCAAGT TTGATAGGAA AATAAATAGT TGCTATTTTA TAAGACAAAC CAAGAGCTGA 2700 GCTTATCTAA TAGCTCTGTG CAACAAATGA GTTTAAAATA GATATTTGAT AACTAAAACA 2760 TCTATTAAAA TATTGCTCAT TTTAGAGGAT TCTTAGGAAA CATTATTTAT TCTCATCATT 2820 CAGATGCAGA CATTCATGGT CTGGAATACT TTTATAAGTT CTACACAAAA ATGACCATCA 2880 CATTTAAATA TTCAGCAGGC TACCCCTCTT GAATTTAGAC CATTTAGCTT TAGAAATTAA 2940 CAGTATACCA ATATATATAA TTAAAAATAG AAACCAAATA GATTCTCTGT ATTTGGCAAC 3000 AGAGTGGCAG AACAATAGTG GCATCTCCAC ATTTGTTAGG ATGAACATAG CCCTTTCCCC 3060 TCTCCTTCCA TAAAAGTGCA CAGAACATGT TAGTGCAGAT ACAGTCCTCA GAACATTAAC 3120 ATTCCATTTT GCAAAAGACA TTTTCCAGAA TCTTGGCAGT AGGTAATTCT GAAACACTTT 3180 TGAATTACCT TCAATCATCC CATATAATTA GGAATCCAGA ATACAAAGTA CAAACTTGGC 3240 AATTGTTATG ATTGAAACTG TCACTGATGC TTAAGGGAAA TTGAAGCAAG AAGCATAATT 3300 TCTTCCTTTA GGTTATATTT CAGCAAAATA CTTGACAGCA ACATACAATG AACAGCTTGT 3360 TTGGAGAGAT GATATGATAC AATGTAATAG TGATGTCAAA ATAACCTGGA GGAATATCCA 3420 AAAACCAGAA AAACGTTAAA ATGAAGCCCA ACTCATGAAC CTCTCTAACT GAAGCCCAGT 3480 CAAAAGAAAG GAAGTATAGT TTTAAGGAAG TTATTTGGTT CTAATGAGTT AAGGAGAAAG 3540 GTTATCTGAG ACACAGTTCT TTGACTTCAG GAATCTCATT TTAGAATTAT ATTCATGCCC 3600 AGTTCCAGTT TTAAAAAGAA ACATAAAGAT TCAATGTAGA CATTTGAATG TTGTAAAATA 3660 CTAAATTTGA AACTCAGAAG AGATAACTTT TAAAAACATA AATCCTAAAA TTATAGTTTA 3720 GAAGATATTT AAGTATAGTT ATATGTAGTA TTTTGAATCT GAAATTATAG ACTGTATTTT 3780 ATAAAAATAA ATTTTGGTCT TGTTTCTCAC TATATCATTT GTTTCAACAA TATATTTTTA 3840 GATCTAAAGT GTTTTCATTT TAATATGATA GTGTGTTTAA TATCATTTGA ATATAAAAAG 3900 ACAGCTGTAA AATTTGATAG TGTGTATTAT TTAAGCACAT CCTGTATATT TCTTTGAATG 3960 CTGCTTTCTC TATATGGGAT GCTTTATATC CCGATTATGT GATGAATGTA AAACTTGAAA 4020 GGAGTCCAAA TTCCAATTTT GTGTAATCTC AGTGAGTCAC AGTTCACATG GCTGCTGGGG 4080 AAATTACCCT GAAAACTGTG GTGTCGCTAT GCTGTGGAGT AAACAGACAG GCAAGAGGTG 4140 CTGGGCTTTA TCCTGCTGAA GGTTTATAGA CATGGAAATC TTTAGAAAAT GGTGTAGAAG 4200 GACCTACACC AGAGAGTGGT ACACCACTCT CTCCTTTCAG AGGACTGAAA CCAAAACAAG 4260 TCCTTAGTAG ACTATTTGTA TGCTGTAAAT TTTTATCCAA AAGACAAGTA TTCATGGGTA 4320 GTTTCAGATA TATTAGCATT TGCTTGCTAA AACTTTTAAA TTACTTAGTA ATAACCAAAA 4380 AAAGACACTA TTTTAGGCAT GATTGATCAA TTGAAAGCAT AGATAATCAT AAGGAAAAGT 4440 CTTACAGACA AGCTGAAGTA CAGGTACCTA CTTTGAAATG TCTTCTGTTT CCTGCTGTGA 4500 AAGATTTTGG CTGGGGTATT TTCTTGAGAA AAGACCAGAC CCTTAGGTGC CTATAAAGTC 4560 TAAGTAATTG AGACTTAGAA ATTGGCTAAG TAAATTTAAG AGACGTTCAA TAATGTAGGT 4620 GGGTTCAGAT ACCCTTTTAT AATAACTGTC TTCTTAGTAT ATTAACACTC AAGATGTTTG 4680 TGTATCTTTA ATTTGCCTTT GTTTCACAAT AACTGGCTTT TGTTTTCCTT TTCATGGTGT 4740 GTTGTTGGCT ATATAGAGGC ATTTATTGGT AAATTATAAT CAGCAGTTGC ACCATGGAAG 4800 TATTCTTGGT GATAAATTCT TGGGGTTACA TAGTATAGTT AACATGTTAT TTTCAAGAAA 4860 CATGAGTGTG TGTGTCTGTG TGTGTGTGTC TGAAGAGTAT CACTTATATG CAGTGCATAT 4920 ACATGTAAGT GCATTACTTT GCTCAAATAT CTTCTGACCT ATTACAGTCA ACTCATGCAT 4980 GAGTGTGAAC ATGTATTACA GAAGGTCTTA CAGCCTTAGT TTCTGTTTTA GATTTTATGT 5040 GCTGCTTCCT TTCTCAAACA AAAGCATGAA AGGAAAGAGG ATAAGTACTA GAAATATTCA 5100 TTTTTTTCCT TCACAAATCT AAATGTTGCT TATGAAAACT CATCTTAGAG TAATGAATAT 5160 GTGGAAGTGG GTAGGTAGGA GGAAATGTGC CTCTTTAAAA TCCTAAAATT TTACCATTGA 5220 TATTGACATT TGTTTGCGTG TATATAAATG GAGCATGTGT AAATATAGAA TTCCAATAGC 5280 ATTTTTTATT TTATTATAAA TCTATAATAA ATATATATAA ATCACTACCA 5331 |
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Sequence Source | Ensembl | ||||||||||||
Keyword | KW-0010--Activator |
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Interpro | IPR001214--SET_dom |
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PROSITE | PS50280--SET |
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Pfam | PF00096--zf-C2H2 |
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Gene Ontology | GO:0005634--C:nucleus |
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Orthology | |||||||||||||
Created Date | 25-Jun-2016 |