WERAM Information

Tag Content
WERAM ID WERAM-Arl-0120
Ensembl Protein ID scaffold_200471.1
Gene Name BRD4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_200471.1 scaffold_200471.1 scaffold_200471.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.30e-11 44.3 279 345
Organism Arabidopsis lyrata
Domain Profile
  Ac_Reader Bromodomain
          BROMO.txt   3 hevsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkss 70 
                        +e++ +Fr++ d  ++   Y+++++++mdL+ti++r++    ss++e+ +D+ l+ nNa  ++++++ 
  scaffold_200471.1 279 NECALVFRRRLDS-QKRGRYKKLVQRHMDLDTIQSRINGCSISSAKELFRDFLLVANNAAIFYSKNTR 345
                        68999********.8*************************************************9875 PP
Protein Sequence
(Fasta)		MVMVMITTTM ESDWGTWEEL LLGGAVLRHG TGDWTVVADE LRSHSLPEIF TPEICKAKYK 60
DLRKRYLGCK AWFEELKKKR VAELKAALLK SDDSIGSLES KLQSLKSESN DECHQNNYDS 120
SRTLSLEPSP KSEGGGECTS KDTSKDLSSV GSFTQQEQTT TNWSPEAKSE APVVIEQEKT 180
KNLLHSDIFE SVYGGGGQVL LSMRKKRGKR KRKDCSVSVG KEVMEVSAVE ESDLLDTSAD 240
IASISRSKEA ASTSSSQSRG HGLAIPKELM KIYNTIVQNE CALVFRRRLD SQKRGRYKKL 300
VQRHMDLDTI QSRINGCSIS SAKELFRDFL LVANNAAIFY SKNTREYKSA VSLRDIVTKS 360
LRHYLTEDHH PHRSSITAST KVVVLPQKST SPSVRTSLAA KKPRTGAHPL KTVVHDMAKT 420
SSRGNKRSVT DLPVAAVKSS AAGKKGTAVE RRKDGRQANR GLESPALMGR KRNRVR 476
Nucleotide Sequence
(Fasta)		CACGCGTGAT TTATTTTTTG ATGGTTATGG TGATGATAAC GACGACGATG GAGAGTGATT 60
GGGGAACATG GGAGGAGCTT CTTCTCGGCG GCGCTGTTCT CCGTCATGGA ACCGGTGATT 120
GGACCGTCGT TGCCGACGAA CTCCGTTCTC ATTCTCTACC TGAGATTTTC ACACCTGAGA 180
TATGCAAGGC CAAGTACAAG GACTTGCGAA AACGTTATTT GGGATGCAAA GCTTGGTTTG 240
AAGAGCTTAA GAAGAAACGA GTAGCTGAGC TTAAGGCAGC TTTACTTAAA TCCGATGACT 300
CGATTGGGTC TTTGGAATCA AAGCTTCAGA GTCTGAAGTC AGAAAGTAAC GATGAATGTC 360
ATCAAAACAA TTATGATTCT AGCCGAACGT TATCACTTGA ACCCTCCCCG AAATCCGAGG 420
GCGGAGGAGA ATGCACGAGC AAAGATACAT CCAAAGACTT GTCATCAGTT GGTAGTTTCA 480
CACAGCAAGA GCAGACCACA ACAAACTGGT CACCGGAAGC TAAGTCAGAA GCTCCAGTAG 540
TAATAGAGCA AGAGAAGACG AAAAACCTAT TACACAGCGA CATTTTTGAG TCAGTGTATG 600
GGGGTGGAGG ACAAGTGCTT CTGAGTATGA GGAAGAAACG AGGCAAGAGA AAACGGAAAG 660
ATTGCAGTGT CAGTGTTGGT AAAGAAGTGA TGGAAGTTAG CGCTGTGGAA GAAAGCGATT 720
TGTTGGATAC TTCTGCGGAT ATTGCTAGCA TTTCTAGGAG TAAAGAAGCT GCTTCTACTA 780
GCAGCAGTCA AAGCCGAGGT CATGGTTTGG CTATACCAAA GGAGCTTATG AAGATATACA 840
ACACTATCGT ACAGAACGAA TGTGCACTCG TCTTCCGTAG ACGGCTTGAT AGCCAGAAAA 900
GGGGGAGATA CAAGAAATTG GTACAGAGGC ATATGGATTT AGACACTATA CAATCAAGAA 960
TCAACGGTTG TTCGATATCT TCAGCGAAAG AGCTTTTTAG GGACTTTCTT TTGGTGGCGA 1020
ACAATGCAGC TATTTTTTAC TCTAAGAACA CTCGTGAATA CAAATCCGCG GTGAGCCTTA 1080
GAGACATTGT TACAAAGTCT CTAAGACACT ATTTGACAGA AGATCATCAT CCTCATCGCA 1140
GCAGCATTAC TGCAAGCACA AAGGTTGTGG TTCTTCCTCA GAAATCTACA TCTCCTTCTG 1200
TCAGAACGAG TCTGGCAGCT AAAAAACCAA GAACCGGGGC GCACCCTCTC AAAACGGTTG 1260
TGCATGATAT GGCAAAGACT TCAAGCAGGG GTAACAAAAG GTCTGTTACG GATTTACCAG 1320
TTGCTGCTGT GAAATCCTCA GCAGCGGGTA AGAAGGGAAC AGCGGTAGAG AGAAGAAAGG 1380
ACGGTAGACA AGCAAATCGT GGACTCGAAT CTCCTGCATT GATGGGGAGA AAGCGGAACC 1440
GGGTTAGATG ATTTTTATGA AGGGTTTGTT T 1472
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0022 AT1G61215.1 Arabidopsis thaliana 96 0.0 791
WERAM-Bro-0071 Bo4g086660.1 Brassica oleracea 75 1e-176 617
WERAM-Brr-0154 Bra031444.1-P Brassica rapa 77 3e-169 592
WERAM-Thc-0079 EOY28363 Theobroma cacao 49 1e-84 311
WERAM-Glm-0191 GLYMA15G07500.1 Glycine max 49 3e-69 259
WERAM-Prp-0058 EMJ13280 Prunus persica 43 1e-66 251
WERAM-Sot-0030 PGSC0003DMT400028077 Solanum tuberosum 42 2e-65 247
WERAM-Sol-0123 Solyc10g009160.2.1 Solanum lycopersicum 42 7e-64 242
WERAM-Pot-0044 POPTR_0004s03710.1 Populus trichocarpa 46 5e-55 212
WERAM-Met-0107 AES90380 Medicago truncatula 61 8e-40 162
WERAM-Amt-0004 ERN03421 Amborella trichopoda 36 2e-37 154
WERAM-Sob-0035 Sb02g036530.1 Sorghum bicolor 52 2e-28 124
WERAM-Zem-0131 GRMZM2G402804_P01 Zea mays 51 3e-28 123
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 43 2e-27 121
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 47 1e-26 118
WERAM-Sei-0112 Si029233m Setaria italica 49 2e-26 117
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 28 3e-26 117
WERAM-Aet-0053 EMT30824 Aegilops tauschii 47 3e-26 117
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 46 4e-26 117
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 46 4e-26 117
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 46 4e-26 117
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 46 4e-26 116
WERAM-Brd-0012 BRADI1G24580.1 Brachypodium distachyon 44 3e-25 114
WERAM-Tru-0068 TRIUR3_26205-P1 Triticum urartu 46 3e-23 107
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 35 4e-14 77.0
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 35 7e-14 75.9
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 32 2e-13 74.7
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 33 2e-13 74.3
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 31 2e-12 71.6
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 39 3e-12 70.5
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 39 3e-11 67.4
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 36 1e-09 62.0
WERAM-Mum-0011 ENSMUSP00000003876.3 Mus musculus 29 3e-07 54.3
WERAM-Caf-0015 ENSCAFP00000001706.3 Canis familiaris 29 3e-07 54.3
WERAM-Chs-0161 ENSCSAP00000009402.1 Chlorocebus sabaeus 29 3e-07 53.9
WERAM-Fec-0020 ENSFCAP00000001583.3 Felis catus 29 3e-07 53.9
WERAM-Poa-0140 ENSPPYP00000017690.2 Pongo abelii 29 3e-07 53.9
WERAM-Ran-0134 ENSRNOP00000050917.2 Rattus norvegicus 29 3e-07 53.9
WERAM-Caj-0070 ENSCJAP00000011760.1 Callithrix jacchus 29 3e-07 53.9
WERAM-Sus-0107 ENSSSCP00000015240.2 Sus scrofa 29 3e-07 53.9
WERAM-Mup-0107 ENSMPUP00000009600.1 Mustela putorius furo 29 3e-07 53.9
WERAM-Ict-0073 ENSSTOP00000006543.2 Ictidomys tridecemlineatus 29 3e-07 53.9
WERAM-Ova-0169 ENSOARP00000017010.1 Ovis aries 29 3e-07 53.9
WERAM-Myl-0221 ENSMLUP00000020502.1 Myotis lucifugus 29 3e-07 53.9
WERAM-Drm-0075 FBpp0084763 Drosophila melanogaster 33 3e-07 53.9
WERAM-Paa-0017 ENSPANP00000003219.1 Papio anubis 29 3e-07 53.9
WERAM-Gog-0084 ENSGGOP00000006949.2 Gorilla gorilla 29 3e-07 53.9
WERAM-Aim-0185 ENSAMEP00000017355.1 Ailuropoda melanoleuca 29 3e-07 53.9
WERAM-Nol-0091 ENSNLEP00000010657.2 Nomascus leucogenys 29 4e-07 53.9
WERAM-Pat-0140 ENSPTRP00000029549.3 Pan troglodytes 29 4e-07 53.9
WERAM-Hos-0085 ENSP00000254900.5 Homo sapiens 29 4e-07 53.5
WERAM-Bot-0083 ENSBTAP00000011535.5 Bos taurus 29 4e-07 53.5
WERAM-Loa-0081 ENSLAFP00000006424.3 Loxodonta africana 29 4e-07 53.5
WERAM-Ptv-0114 ENSPVAP00000010231.1 Pteropus vampyrus 29 4e-07 53.5
WERAM-Ect-0145 ENSETEP00000016342.1 Echinops telfairi 29 4e-07 53.5
WERAM-Tut-0065 ENSTTRP00000005049.1 Tursiops truncatus 29 4e-07 53.5
WERAM-Dan-0025 ENSDNOP00000002486.3 Dasypus novemcinctus 29 4e-07 53.5
WERAM-Orc-0079 ENSOCUP00000007231.3 Oryctolagus cuniculus 29 4e-07 53.5
WERAM-Vip-0063 ENSVPAP00000005865.1 Vicugna pacos 29 4e-07 53.5
WERAM-Eqc-0188 ENSECAP00000020214.1 Equus caballus 29 5e-07 53.5
WERAM-Soa-0033 ENSSARP00000003157.1 Sorex araneus 29 5e-07 53.1
WERAM-Prc-0064 ENSPCAP00000006095.1 Procavia capensis 29 6e-07 53.1
WERAM-Mam-0009 ENSMMUP00000002006.2 Macaca mulatta 29 6e-07 53.1
WERAM-Ocp-0030 ENSOPRP00000002594.1 Ochotona princeps 29 7e-07 53.1
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 32 7e-07 52.8
WERAM-Otg-0045 ENSOGAP00000003028.2 Otolemur garnettii 29 1e-06 52.0
WERAM-Ten-0033 ENSTNIP00000006076.1 Tetraodon nigroviridis 27 2e-06 51.6
Created Date 25-Jun-2016