WERAM Information

Tag Content
WERAM ID WERAM-Bro-0071
Ensembl Protein ID Bo4g086660.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo4g086660 Bo4g086660.1 Bo4g086660.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.50e-10 42.5 270 335
Organism Brassica oleracea
Domain Profile
  Ac_Reader Bromodomain
     BROMO.txt   3 hevsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenks 69 
                   +e++ +Fr++ d  ++   Y+++++++mdL+tik+r++ +  ss++e+  D+ l+ nNa  +++ ++
  Bo4g086660.1 270 NECALVFRRRLDS-QKRARYKKLVRRHMDLDTIKSRINGRLISSAKELFMDILLVANNAAIFYSTNT 335
                   57899********.8************************************************9875 PP
Protein Sequence
(Fasta)		MVMMTTKMAS DWGTWEELLL GGAVLRHGTG DWTVVSEELR SHSLSDIFTP EICKAKYKNL 60
RERYLGCKAW FEELKKKRVA ELKAALLRSE DSIGSLESKL QSLKSESNEE CHQNNYYDSS 120
RTLSLEPPSP KSEGGGECTS KDTSKDMSSV GSFTQQELTT TNWSPQAKSE AAKEQDKKMN 180
LLHRDIFESM YGIGVRGQVL PSMRKKRGKR KRKDCSAGKD VTEESDMLDS STVDIAKEGA 240
STSSTSIQSR GHGLALPEEL MKIYNTIIHN ECALVFRRRL DSQKRARYKK LVRRHMDLDT 300
IKSRINGRLI SSAKELFMDI LLVANNAAIF YSTNTREHKS AVCLRDIVTK SLRHYLTEDH 360
HPPPPHRSSS ITTSTKVPVP PSTSKSPAVR TSVGVKKPRT GAHPLKKAEQ DIVKTASSSG 420
KKMIVPVAGK KVTAVERRRG RDGNKQVDRG LDSPALTGRK RTRVR 465
Nucleotide Sequence
(Fasta)		ATGGTTATGA TGACGACAAA GATGGCGAGT GATTGGGGAA CATGGGAAGA GCTTCTACTC 60
GGCGGTGCCG TTCTACGTCA CGGAACCGGC GACTGGACCG TCGTCTCCGA AGAACTCCGT 120
TCTCATTCTC TCTCCGATAT TTTTACACCT GAGATATGTA AAGCCAAGTA CAAGAACTTG 180
CGAGAACGTT ATTTGGGATG CAAAGCTTGG TTTGAAGAGC TTAAAAAGAA ACGAGTAGCT 240
GAGCTTAAGG CTGCTTTACT TAGATCCGAA GACTCCATTG GGTCGTTGGA ATCAAAGCTT 300
CAAAGTCTGA AATCAGAAAG CAATGAAGAA TGTCATCAAA ACAATTATTA TGATTCAAGC 360
CGAACGTTAT CACTCGAACC ACCCTCTCCA AAATCCGAAG GCGGAGGAGA ATGCACAAGC 420
AAAGATACAT CCAAAGACAT GTCATCAGTT GGTAGTTTCA CACAGCAAGA GCTCACTACA 480
ACAAACTGGT CACCACAAGC CAAGTCAGAA GCAGCAAAAG AGCAAGATAA GAAGATGAAT 540
CTGTTACACC GAGACATTTT TGAGTCCATG TATGGTATAG GAGTAAGAGG ACAAGTGCTT 600
CCGAGTATGA GGAAGAAACG AGGCAAGCGA AAACGAAAAG ATTGCAGCGC CGGTAAAGAT 660
GTTACGGAAG AAAGCGATAT GTTGGATTCT TCTACCGTTG ATATTGCTAA GGAAGGTGCT 720
TCTACTAGCA GCACCAGCAT TCAAAGCCGA GGCCATGGTT TGGCTTTACC TGAAGAGCTT 780
ATGAAGATAT ACAACACTAT CATACATAAC GAATGTGCTC TTGTCTTCCG GAGACGGCTT 840
GATAGTCAGA AAAGGGCAAG ATATAAGAAA CTGGTACGGA GGCATATGGA TTTAGACACT 900
ATAAAGTCAA GAATCAACGG TCGTTTGATA TCTTCAGCTA AAGAGCTGTT TATGGACATT 960
CTTTTGGTGG CGAACAATGC AGCCATTTTT TACTCTACGA ACACTCGTGA GCACAAATCT 1020
GCAGTATGTC TTAGAGACAT TGTCACAAAG TCTCTCAGAC ACTATTTGAC CGAAGACCAT 1080
CATCCTCCCC CTCCTCATCG CAGCAGCAGC ATTACTACAA GCACAAAGGT TCCAGTTCCC 1140
CCTTCGACAT CTAAATCTCC TGCTGTCCGA ACGAGCGTGG GAGTTAAAAA ACCAAGAACA 1200
GGGGCGCACC CTCTTAAAAA GGCTGAGCAG GATATAGTGA AGACGGCTTC AAGCAGTGGT 1260
AAAAAAATGA TTGTACCGGT GGCTGGTAAG AAAGTTACAG CGGTAGAGAG AAGAAGAGGA 1320
AGAGATGGTA ATAAACAAGT GGATCGTGGA CTCGATTCTC CTGCATTGAC GGGGAGAAAG 1380
CGGACTAGGG TGAGATGA 1399
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0154 Bra031444.1-P Brassica rapa 80 6e-178 621
WERAM-Arl-0120 scaffold_200471.1 Arabidopsis lyrata 75 1e-172 603
WERAM-Art-0022 AT1G61215.1 Arabidopsis thaliana 76 9e-168 587
WERAM-Thc-0079 EOY28363 Theobroma cacao 51 3e-76 283
WERAM-Glm-0167 GLYMA13G31800.1 Glycine max 47 6e-66 249
WERAM-Prp-0058 EMJ13280 Prunus persica 46 2e-60 230
WERAM-Sot-0030 PGSC0003DMT400028077 Solanum tuberosum 44 5e-59 226
WERAM-Sol-0123 Solyc10g009160.2.1 Solanum lycopersicum 44 8e-59 225
WERAM-Pot-0044 POPTR_0004s03710.1 Populus trichocarpa 48 6e-52 202
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 35 9e-41 165
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 35 9e-41 165
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 35 9e-41 165
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 35 3e-40 163
WERAM-Brd-0012 BRADI1G24580.1 Brachypodium distachyon 34 3e-38 156
WERAM-Met-0107 AES90380 Medicago truncatula 56 8e-38 155
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 47 4e-26 117
WERAM-Amt-0004 ERN03421 Amborella trichopoda 65 1e-25 115
WERAM-Aet-0053 EMT30824 Aegilops tauschii 47 6e-25 112
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 46 9e-25 112
WERAM-Sob-0035 Sb02g036530.1 Sorghum bicolor 49 1e-24 111
WERAM-Zem-0131 GRMZM2G402804_P01 Zea mays 48 3e-24 110
WERAM-Sei-0112 Si029233m Setaria italica 45 5e-23 106
WERAM-Tru-0068 TRIUR3_26205-P1 Triticum urartu 45 5e-22 103
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 35 1e-15 82.0
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 36 4e-14 76.6
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 34 6e-13 73.2
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 34 7e-13 72.8
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 35 8e-13 72.4
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 31 2e-12 71.2
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 40 1e-10 65.5
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 37 7e-10 62.8
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 36 8e-10 62.8
WERAM-Drm-0075 FBpp0084763 Drosophila melanogaster 34 1e-08 58.5
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 29 5e-07 53.5
Created Date 25-Jun-2016