WERAM Information

Tag Content
WERAM ID WERAM-Sol-0123
Ensembl Protein ID Solyc10g009160.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc10g009160.2 Solyc10g009160.2.1 Solyc10g009160.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 5.00e-10 40 287 351
Organism Solanum lycopersicum
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt   3 hevsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenk 68 
                         +e + +Fr++ d  ++  +Y+++ik++md++t+++rl +   +sp e+ +D+ l+ +Na  ++++ 
  Solyc10g009160.2.1 287 NEAAMVFRHRRDS-QKRAKYKEMIKQHMDIETVRSRLVSCSIKSPGELFRDLLLLATNAIVFYSKR 351
                         5678899999999.7************************************************986 PP
Protein Sequence
(Fasta)		METVENRTRM REEVGPRQKM WGTWEELILG GAILRHGIQD WNVVALELRS RNFYFTPQAC 60
KAKYEDLQKR YAGCNAWFEE LRKRRVEELK RELEKSESSI GSLITKIESL KAEKERSSQI 120
NYGSCIHTES PARVKSECME SIGKDGICAG NFMLDSTRTN FSPELESPAV ASANEIDSKL 180
ECSESCEPDE ILNISNQAET TNGNGRGALS KRKGKRKRKE VVSDVKRSIQ ESDNVCSISG 240
ISPSNGKDTS TSCDPSIKPT ATEDDKEGLS RLMNEDLMAI FNSITQNEAA MVFRHRRDSQ 300
KRAKYKEMIK QHMDIETVRS RLVSCSIKSP GELFRDLLLL ATNAIVFYSK RTTEHKSAVA 360
LRDVVTKVYH DHYKSSYHTT TSSQLTFSTT GNLPVKPRSA RPRPSKFKLQ SNS 413
Nucleotide Sequence
(Fasta)		TTCATCGGAG TAGCGCCGAC GTGATCGTAT CGGTGATTAA CGCTAACTTG CACGCGGTTC 60
AAAATATTCT AAACCCGGTC AGTTTCTCCG GTGCCGGTGG TGGTTGAAGC TAACGTGCGC 120
ATGGTACAAA ATTGTTAAAC TTCGATTCCT TTAAAATCAT CTGAGCCGTC CACGTGGATG 180
GAGACTGTTG AGAACCGTAC ACGTATGAGG GAAGAAGTGG GGCCCAGACA GAAGATGTGG 240
GGTACGTGGG AGGAATTAAT CCTAGGTGGC GCTATTCTCC GGCATGGGAT ACAAGACTGG 300
AACGTCGTCG CTTTGGAGCT TCGTTCTCGT AACTTTTACT TCACCCCTCA GGCCTGCAAA 360
GCCAAGTATG AGGATTTACA AAAGCGTTAC GCGGGCTGCA ATGCTTGGTT TGAAGAGCTA 420
AGAAAGAGAC GAGTTGAAGA ACTGAAGCGA GAATTGGAGA AATCGGAAAG CTCAATTGGG 480
TCTCTCATCA CAAAGATTGA AAGCTTGAAG GCTGAGAAAG AACGGTCTTC TCAGATTAAT 540
TATGGTTCCT GTATTCACAC TGAATCTCCC GCTCGTGTAA AGTCAGAATG CATGGAATCT 600
ATTGGCAAAG ATGGCATATG CGCTGGCAAC TTCATGCTAG ACAGTACTAG GACTAACTTT 660
TCGCCTGAGC TTGAGAGTCC TGCAGTAGCT TCGGCTAATG AGATAGACTC AAAGCTAGAA 720
TGCTCGGAGT CTTGTGAGCC AGATGAAATA CTAAACATAA GCAATCAAGC AGAGACTACC 780
AATGGAAATG GAAGAGGGGC TTTGAGTAAG AGAAAAGGTA AGAGAAAAAG GAAAGAAGTC 840
GTTTCAGATG TCAAAAGGAG TATTCAGGAG AGCGACAATG TGTGCTCAAT CAGTGGCATC 900
TCCCCTTCCA ACGGTAAGGA CACATCAACC AGTTGCGACC CAAGTATTAA GCCTACTGCA 960
ACGGAGGATG ATAAAGAAGG ATTATCTAGG TTGATGAATG AGGATTTGAT GGCAATTTTC 1020
AATTCCATCA CACAGAATGA AGCGGCTATG GTCTTTAGGC ATCGTCGTGA TAGTCAGAAA 1080
AGAGCTAAAT ACAAGGAAAT GATCAAGCAG CATATGGATA TTGAAACTGT AAGATCAAGA 1140
CTAGTCAGCT GTTCCATCAA ATCACCAGGT GAACTCTTTA GGGATTTACT TTTACTAGCA 1200
ACCAACGCCA TTGTATTTTA TTCGAAGAGG ACGACAGAAC ACAAGTCAGC TGTGGCTCTC 1260
AGAGACGTCG TCACTAAAGT ATATCATGAC CATTATAAAA GCTCTTACCA CACAACTACT 1320
TCTTCTCAAC TCACATTCTC AACAACAGGT AATCTGCCCG TGAAGCCAAG AAGTGCTCGC 1380
CCTCGTCCCT CCAAATTCAA ACTTCAATCC AATTCTTGAA ACAATGTAAA TAGCATTGCA 1440
GGAATCATTC GATGAGATGA TCATAAACAA AGTGATGCTG ATTCCGAGGC TCGATTGTAG 1500
TCATTGTTAG GTGACTCACA GCCTCCCTCT CGCCCAAATA AATGAAATGG GATGAATCAA 1560
ATCAATAAGC TTTTTGATTG ATTCAGGGCG CAGCGAAGCC AGCTGCTAAG AAAGGGTACA 1620
ACAGACATGG CAAGCCCGTG TGGGGATCGG TTGATGGATC TGTTAATCCA AGATACACGA 1680
CTTAAAACTC CGTTTGAGGA GGAACATTGA TCTGAGGTGA TTTGCAGGTT GCTTAGTCCT 1740
CTTGTTCATG TACAAATTTT C 1762
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0030 PGSC0003DMT400028077 Solanum tuberosum 89 2e-180 629
WERAM-Thc-0079 EOY28363 Theobroma cacao 47 5e-71 265
WERAM-Glm-0167 GLYMA13G31800.1 Glycine max 47 4e-69 259
WERAM-Art-0022 AT1G61215.1 Arabidopsis thaliana 44 1e-59 228
WERAM-Arl-0120 scaffold_200471.1 Arabidopsis lyrata 44 1e-59 228
WERAM-Prp-0058 EMJ13280 Prunus persica 46 2e-57 220
WERAM-Bro-0071 Bo4g086660.1 Brassica oleracea 44 6e-56 215
WERAM-Pot-0044 POPTR_0004s03710.1 Populus trichocarpa 47 6e-50 195
WERAM-Brd-0012 BRADI1G24580.1 Brachypodium distachyon 36 1e-37 154
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 34 1e-36 151
WERAM-Tru-0068 TRIUR3_26205-P1 Triticum urartu 36 3e-34 143
WERAM-Met-0038 AES63730 Medicago truncatula 41 2e-33 140
WERAM-Tra-0055 Traes_2AS_CF37C58E7.1 Triticum aestivum 35 5e-33 139
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 33 5e-31 132
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 33 5e-31 132
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 33 5e-31 132
WERAM-Amt-0004 ERN03421 Amborella trichopoda 38 1e-30 131
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 33 2e-30 130
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 29 8e-30 128
WERAM-Brr-0154 Bra031444.1-P Brassica rapa 61 1e-28 124
WERAM-Aet-0053 EMT30824 Aegilops tauschii 50 5e-22 102
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 29 3e-21 100
WERAM-Zem-0131 GRMZM2G402804_P01 Zea mays 47 6e-18 89.4
WERAM-Sei-0112 Si029233m Setaria italica 56 7e-18 89.4
WERAM-Sob-0035 Sb02g036530.1 Sorghum bicolor 64 6e-17 86.3
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 41 2e-15 81.3
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 41 4e-15 79.7
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 41 7e-15 79.0
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 36 9e-14 75.5
WERAM-Sem-0102 EFJ33930 Selaginella moellendorffii 31 2e-13 74.3
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 45 6e-10 62.8
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 39 4e-09 60.1
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 39 4e-09 60.1
WERAM-Ten-0033 ENSTNIP00000006076.1 Tetraodon nigroviridis 30 1e-07 55.1
WERAM-Orn-0110 ENSONIP00000011638.1 Oreochromis niloticus 31 2e-07 54.7
WERAM-Pof-0179 ENSPFOP00000015004.2 Poecilia formosa 31 2e-06 51.2
WERAM-Gaa-0049 ENSGACP00000006514.1 Gasterosteus aculeatus 34 2e-06 51.2
WERAM-Xim-0211 ENSXMAP00000017026.1 Xiphophorus maculatus 31 2e-06 51.2
WERAM-Gam-0037 ENSGMOP00000003616.1 Gadus morhua 31 2e-06 50.8
WERAM-Tar-0101 ENSTRUP00000020960.1 Takifugu rubripes 27 2e-06 50.8
WERAM-Drm-0049 FBpp0088092 Drosophila melanogaster 25 4e-06 50.1
Created Date 25-Jun-2016