WERAM Information

Tag Content
WERAM ID WERAM-Brr-0154
Ensembl Protein ID Bra031444.1-P
Gene Name BRD4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra031444 Bra031444.1 Bra031444.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 9.00e-10 39.5 268 334
Organism Brassica rapa
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   2 ehevsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenks 69 
                    ++e++ +Fr++ d  ++   Y+++++++mdL+t k+r++ +  ss++e+  D+ l+ nNa  ++++++
  Bra031444.1-P 268 QNECALVFRRRLDS-QKRARYKKLVRRHMDLDTLKSRINGRSISSAKELFMDFLLLANNAAIFYSKNT 334
                    578999********.8************************************************9986 PP
Protein Sequence
(Fasta)		MESDWGTWEE LLLGGAVLRH GTGDWTVVSE ELRSHSMSGI FTFTPEICKA KYKDLRERYL 60
GCKSWYEEVK KKRVAELKAA LIKSQDSIGS LESKLESLKS ESNDECHENN DYDSSRTLSL 120
EPPSPKSEGG GECTSKDTSK DLSSAGSFTQ QELTTTNWSP PQAKSEAIKE QDKKNNLLHG 180
DIFRSMYGVG GGGGQVLPSM RKKRGKRKRK DCSASKDVTA VEESHMLDDI ASNSRSKEAA 240
STSSNSQSRG HRLALPGELL KIYNTISQNE CALVFRRRLD SQKRARYKKL VRRHMDLDTL 300
KSRINGRSIS SAKELFMDFL LLANNAAIFY SKNTREHKSA VSLRDIVTKS LRHYLTEDHH 360
PPHRSSSGTT SAKVPVPALA SKSPSVPKSV GVKKPRTGAH PLKLVEQDMV KTTSGGGRKR 420
LVTDSPVAAV KSSAASKKVT AVERRRRDAK QVNGGHDSPA LAGRKRNRVR
Nucleotide Sequence
(Fasta)		ATGGAGAGCG ATTGGGGAAC ATGGGAGGAG CTTCTTCTCG GGGGCGCAGT ACTCCGTCAC 60
GGAACCGGCG ACTGGACCGT CGTCTCCGAA GAACTCCGTT CTCATTCCAT GTCCGGAATT 120
TTCACTTTCA CACCTGAGAT ATGCAAGGCT AAGTACAAGG ACTTGCGTGA ACGTTATTTG 180
GGATGCAAAT CTTGGTATGA AGAGGTTAAG AAGAAACGAG TAGCTGAGCT TAAGGCAGCT 240
TTAATTAAAT CCCAAGACTC CATTGGGTCG TTGGAATCAA AGCTTGAGAG TCTGAAATCA 300
GAAAGCAATG ATGAATGTCA TGAAAACAAT GACTATGATT CAAGCCGAAC ATTATCCCTC 360
GAACCACCCT CCCCCAAGTC TGAAGGCGGT GGTGAATGCA CGAGCAAAGA TACATCCAAA 420
GACCTGTCAT CTGCTGGTAG TTTCACACAG CAAGAGCTCA CCACAACTAA CTGGTCTCCA 480
CCACAGGCCA AGTCAGAAGC AATTAAAGAG CAAGACAAGA AGAATAATCT ATTACACGGC 540
GACATCTTTC GGTCCATGTA CGGAGTAGGA GGAGGAGGAG GACAAGTGCT TCCAAGTATG 600
AGAAAGAAAC GAGGCAAGAG AAAACGAAAA GATTGCAGCG CCAGTAAAGA TGTTACCGCT 660
GTGGAGGAAA GCCATATGTT GGATGATATT GCTAGCAATT CTAGGAGTAA AGAAGCTGCT 720
TCTACTAGCA GCAACAGTCA AAGCCGAGGC CACCGTTTGG CTTTACCAGG AGAGCTTCTG 780
AAGATATACA ACACTATCTC ACAGAACGAA TGTGCTCTTG TCTTTCGAAG ACGGCTTGAT 840
AGTCAGAAAA GGGCAAGGTA CAAGAAACTT GTCCGGAGGC ATATGGACTT AGACACTTTA 900
AAATCAAGAA TCAACGGTCG TTCGATATCT TCAGCTAAAG AACTTTTCAT GGACTTTCTT 960
TTGTTGGCGA ACAATGCAGC CATTTTTTAC TCTAAGAACA CTCGTGAGCA CAAATCAGCT 1020
GTGTCCCTCA GAGACATTGT CACCAAGTCT CTTAGACATT ATTTGACAGA AGATCATCAT 1080
CCTCCTCATC GCAGCAGCAG CGGTACTACA AGTGCCAAGG TTCCAGTTCC CGCTTTGGCA 1140
TCTAAATCTC CTTCTGTCCC AAAGAGCGTG GGAGTTAAAA AACCAAGAAC CGGGGCGCAC 1200
CCTCTTAAAT TGGTTGAGCA GGATATGGTG AAGACGACTT CAGGCGGTGG TAGAAAAAGG 1260
CTTGTTACGG ATTCACCAGT TGCTGCAGTG AAATCCTCAG CGGCGAGTAA GAAAGTTACG 1320
GCGGTAGAGA GGAGAAGAAG AGATGCTAAA CAAGTGAATG GTGGACACGA TTCTCCTGCA 1380
TTGGCAGGGA GAAAGCGGAA TAGAGTGAGA TGA 1414
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0014 Bo1g098000.1 Brassica oleracea 95 0.0 749
WERAM-Arl-0120 scaffold_200471.1 Arabidopsis lyrata 79 3e-172 602
WERAM-Art-0022 AT1G61215.1 Arabidopsis thaliana 78 8e-172 600
WERAM-Thc-0079 EOY28363 Theobroma cacao 49 1e-77 288
WERAM-Glm-0191 GLYMA15G07500.1 Glycine max 47 6e-65 245
WERAM-Prp-0058 EMJ13280 Prunus persica 46 2e-59 227
WERAM-Sot-0030 PGSC0003DMT400028077 Solanum tuberosum 43 4e-57 219
WERAM-Pot-0044 POPTR_0004s03710.1 Populus trichocarpa 47 3e-51 200
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 33 6e-41 166
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 33 6e-41 166
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 33 8e-41 165
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 33 2e-40 164
WERAM-Brd-0012 BRADI1G24580.1 Brachypodium distachyon 35 4e-40 163
WERAM-Met-0107 AES90380 Medicago truncatula 63 6e-39 159
WERAM-Amt-0004 ERN03421 Amborella trichopoda 39 2e-34 144
WERAM-Sol-0027 Solyc02g078810.2.1 Solanum lycopersicum 50 5e-33 139
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 45 4e-25 113
WERAM-Zem-0131 GRMZM2G402804_P01 Zea mays 41 2e-24 110
WERAM-Sob-0035 Sb02g036530.1 Sorghum bicolor 41 4e-24 110
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 44 7e-24 109
WERAM-Aet-0053 EMT30824 Aegilops tauschii 44 8e-24 109
WERAM-Sei-0112 Si029233m Setaria italica 43 3e-22 103
WERAM-Tru-0068 TRIUR3_26205-P1 Triticum urartu 43 5e-21 99.8
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 32 4e-15 80.1
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 33 6e-15 79.7
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 38 1e-14 78.6
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 34 8e-14 75.9
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 34 1e-13 75.5
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 32 4e-13 73.6
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 39 5e-10 63.2
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 31 6e-10 62.8
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 34 4e-09 60.5
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 31 5e-08 56.6
WERAM-Orn-0110 ENSONIP00000011638.1 Oreochromis niloticus 26 1e-07 55.5
WERAM-Tar-0101 ENSTRUP00000020960.1 Takifugu rubripes 27 2e-07 54.7
WERAM-Ten-0033 ENSTNIP00000006076.1 Tetraodon nigroviridis 27 2e-07 54.7
WERAM-Drm-0075 FBpp0084763 Drosophila melanogaster 34 6e-07 53.1
WERAM-Pof-0179 ENSPFOP00000015004.2 Poecilia formosa 29 7e-07 52.8
WERAM-Gaa-0049 ENSGACP00000006514.1 Gasterosteus aculeatus 26 7e-07 52.8
WERAM-Xim-0211 ENSXMAP00000017026.1 Xiphophorus maculatus 29 8e-07 52.8
WERAM-Orla-0039 ENSORLP00000004868.1 Oryzias latipes 27 1e-06 52.0
WERAM-Gam-0037 ENSGMOP00000003616.1 Gadus morhua 28 2e-06 51.6
WERAM-Hos-0085 ENSP00000254900.5 Homo sapiens 22 2e-06 51.6
WERAM-Asm-0126 ENSAMXP00000012556.1 Astyanax mexicanus 28 3e-06 50.8
WERAM-Pat-0140 ENSPTRP00000029549.3 Pan troglodytes 22 3e-06 50.8
Created Date 25-Jun-2016