WERAM Information

Tag Content
WERAM ID WERAM-Sot-0030
Ensembl Protein ID PGSC0003DMT400028077
Gene Name PGSC0003DMG400010827
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400010827 PGSC0003DMT400028077 PGSC0003DMT400028077
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 7.80e-11 43.3 275 338
Organism Solanum tuberosum
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   4 evsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenk 68 
                           e + +Fr+ +d  ++  +Y+++ik++md++t+++rl +   +sp e+ +D+ l+ +Na  ++++ 
  PGSC0003DMT400028077 275 EAAMVFRHHCDS-QKRAKYKEMIKQHMDIETVRSRLVSCSIKSPGELFRDLLLLATNAIVFYSKR 338
                           67789*******.8************************************************986 PP
Protein Sequence
(Fasta)		MREEVGPRKK MWGTWEELIL GGAILRHGIQ DWNIVALELR SRNIYFTPQA CKAKYEDLQK 60
RYAGCNAWFE ELRKRRVEEL KRELVKSESS IGSLVTKIES LKAEKERSSQ INYGSGTHTK 120
SPAAHESECM ESIGKDGLCA GNFMLDSTRT NFSPEFESPA VASANEINSK LECSESCEAA 180
EVPNISNQAE TTNGNGRRAL RKRKRKDVGS DVKRSIGESD NVCSISGISL SNCKETSTSC 240
DQSIKPTATE DNKEGLSRLM NDDLMAIFNS IIQNEAAMVF RHHCDSQKRA KYKEMIKQHM 300
DIETVRSRLV SCSIKSPGEL FRDLLLLATN AIVFYSKRTR EHKSAVALRD IVTKVYHDHY 360
KSSYHTTTSS LLTFSTTGNL PVKPRSARPR PSKSKLQSNS
Nucleotide Sequence
(Fasta)		ATGAGGGAAG AAGTAGGGCC CAGAAAGAAG ATGTGGGGTA CTTGGGAGGA ATTAATCCTA 60
GGTGGCGCAA TTCTCCGGCA TGGGATACAA GACTGGAACA TCGTCGCTTT GGAGCTTCGT 120
TCTCGTAACA TTTACTTCAC CCCTCAGGCC TGCAAAGCCA AGTATGAGGA TTTACAAAAG 180
CGTTACGCTG GCTGCAATGC TTGGTTTGAA GAGCTAAGAA AGAGACGAGT TGAAGAACTG 240
AAGCGTGAAT TGGTGAAATC GGAAAGCTCA ATTGGGTCTC TCGTCACAAA GATTGAAAGC 300
CTGAAGGCTG AGAAAGAACG GTCTTCTCAG ATTAATTATG GTTCCGGTAC TCACACTAAA 360
TCACCCGCTG CTCATGAGTC AGAATGCATG GAATCTATTG GCAAAGATGG CTTATGTGCT 420
GGCAACTTCA TGCTAGACAG TACTAGGACC AACTTTTCGC CCGAGTTTGA GAGTCCTGCA 480
GTAGCTTCGG CTAATGAGAT AAACTCAAAA CTAGAATGCT CGGAGTCTTG TGAGGCCGCT 540
GAAGTTCCAA ATATAAGCAA TCAAGCAGAG ACTACCAATG GAAATGGAAG AAGGGCTTTG 600
AGGAAGAGAA AAAGGAAAGA CGTTGGTTCG GATGTCAAAA GGAGTATTGG GGAGAGCGAC 660
AATGTGTGCT CAATCAGTGG CATCTCCCTT TCCAACTGTA AGGAAACATC AACCAGTTGC 720
GACCAAAGTA TTAAGCCTAC TGCGACAGAG GATAATAAAG AAGGATTATC TAGGTTGATG 780
AATGACGATT TGATGGCAAT TTTCAATTCC ATTATACAGA ATGAAGCGGC TATGGTCTTT 840
AGGCATCATT GCGATAGTCA GAAGAGAGCT AAATATAAGG AAATGATCAA GCAGCATATG 900
GATATTGAAA CAGTAAGATC AAGATTAGTC AGCTGTTCCA TCAAATCACC AGGTGAACTC 960
TTTAGAGATT TACTTTTGCT AGCAACCAAC GCCATTGTAT TTTACTCAAA GAGGACGAGA 1020
GAACACAAGT CAGCTGTGGC TCTCAGAGAC ATTGTCACTA AAGTATATCA TGACCATTAT 1080
AAAAGCTCTT ACCACACAAC TACTTCTTCT CTGCTCACAT TCTCAACAAC AGGTAATCTG 1140
CCCGTGAAGC CAAGAAGTGC TCGCCCTCGC CCCTCCAAAT CCAAACTTCA ATCCAATTCT 1200
TGA 1204
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0123 Solyc10g009160.2.1 Solanum lycopersicum 90 0.0 661
WERAM-Thc-0079 EOY28363 Theobroma cacao 48 1e-78 291
WERAM-Glm-0167 GLYMA13G31800.1 Glycine max 48 2e-75 280
WERAM-Prp-0058 EMJ13280 Prunus persica 47 7e-65 245
WERAM-Arl-0120 scaffold_200471.1 Arabidopsis lyrata 45 5e-63 239
WERAM-Art-0022 AT1G61215.1 Arabidopsis thaliana 45 8e-63 238
WERAM-Bro-0071 Bo4g086660.1 Brassica oleracea 43 3e-57 219
WERAM-Brr-0154 Bra031444.1-P Brassica rapa 41 2e-55 214
WERAM-Pot-0044 POPTR_0004s03710.1 Populus trichocarpa 46 2e-53 207
WERAM-Brd-0012 BRADI1G24580.1 Brachypodium distachyon 35 3e-40 163
WERAM-Tra-0093 Traes_2DS_86FDBD81F.1 Triticum aestivum 34 2e-39 160
WERAM-Aet-0053 EMT30824 Aegilops tauschii 34 3e-38 156
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 35 9e-38 155
WERAM-Met-0038 AES63730 Medicago truncatula 42 4e-36 149
WERAM-Tru-0068 TRIUR3_26205-P1 Triticum urartu 33 8e-35 145
WERAM-Amt-0004 ERN03421 Amborella trichopoda 38 2e-34 144
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 33 4e-34 143
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 33 1e-33 141
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 33 1e-33 141
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 32 4e-33 139
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 30 6e-30 129
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 28 2e-21 101
WERAM-Sei-0112 Si029233m Setaria italica 65 3e-19 93.6
WERAM-Sob-0035 Sb02g036530.1 Sorghum bicolor 63 8e-19 92.4
WERAM-Zem-0131 GRMZM2G402804_P01 Zea mays 63 2e-18 91.3
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 39 9e-15 78.6
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 40 2e-14 77.4
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 40 4e-14 76.6
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 34 5e-13 72.8
WERAM-Sem-0102 EFJ33930 Selaginella moellendorffii 34 6e-12 69.3
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 45 5e-11 66.2
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 39 5e-09 59.7
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 39 5e-09 59.7
WERAM-Ten-0033 ENSTNIP00000006076.1 Tetraodon nigroviridis 30 1e-07 55.1
WERAM-Orn-0110 ENSONIP00000011638.1 Oreochromis niloticus 31 2e-07 54.3
WERAM-Gaa-0049 ENSGACP00000006514.1 Gasterosteus aculeatus 29 5e-07 53.1
WERAM-Pof-0179 ENSPFOP00000015004.2 Poecilia formosa 30 2e-06 50.8
WERAM-Tar-0101 ENSTRUP00000020960.1 Takifugu rubripes 27 3e-06 50.8
WERAM-Mae-0024 ENSMEUP00000001723.1 Macropus eugenii 25 3e-06 50.8
WERAM-Xim-0211 ENSXMAP00000017026.1 Xiphophorus maculatus 30 3e-06 50.4
WERAM-Gam-0037 ENSGMOP00000003616.1 Gadus morhua 30 4e-06 50.1
WERAM-Drm-0075 FBpp0084763 Drosophila melanogaster 28 8e-06 48.9
WERAM-Sah-0116 ENSSHAP00000012403.1 Sarcophilus harrisii 24 8e-06 48.9
Created Date 25-Jun-2016