WERAM Information

Tag Content
WERAM ID WERAM-Sei-0112
Ensembl Protein ID Si029233m
Gene Name SETIT_029233mg
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Si029233m.g Si029233m Si029233m
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 6.30e-06 27.2 399 462
Organism Setaria italica
Domain Profile
  Ac_Reader Bromodomain
  BROMO.txt   5 vsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenk 68 
                ++ +++++ d q +   Y+++i+++md+ t  +++++g  ss +e+++D+   +nN  a++++ 
  Si029233m 399 DCLMLQRQLDTQRKRVRYKKMIRRHMDFRTLHSKIKSGAISSTKELLRDILIFVNNVIAFYPKA 462
                56778889999877779*******************************************9875 PP
Protein Sequence
(Fasta)		MVVVAVGGGG GGGWGTWEEL VLGGAVLRHG GAAWAAVADE LRTRSPCAFS PEECEAKFAE 60
IQSRYSPCNA WFEELRKQRV AELKRELEKS ENSIGSLQSV IESLSNSKHG DGSSECRTSH 120
TESCSHSENI ADTSSGKEAS RDRSSAASFT EEASNSQKSQ QVQRCDTDSI QANNPSPDEP 180
YPQAQVEKVC PKDSLLWGSR KQRGRRARRT LIKGGHSSRD GDPTSTACIE EREGSSEGCM 240
TDLKSPKVES IVVKKGLKSP KVESSVMNKD LKTPNVGSGV MKKGLKTPNG ESDVMKKGLK 300
SPKAESDVLK GLKTPKAESD VTKKGLKTPK AESDVTKKGL KTPKAESDFM KKGLKTPKAE 360
SDVMKKGLKT PKAECGQAVV EKIKQKLTEI LSSISTQGDC LMLQRQLDTQ RKRVRYKKMI 420
RRHMDFRTLH SKIKSGAISS TKELLRDILI FVNNVIAFYP KATLEHMAAV ELRGFACKTV 480
MQSTSLLLKS HGETGTAGAS VVKQNARALQ PGRPGPGDAR GSKVASKEAT AKEGEGKSSR 540
SDTSLTANQK TTQRNEPDKK RGVGRPPKSG QKTAGAQEDN PSKGRKRGAG AQVDSPSKGR 600
KRSAEDSISK GGKKSRR 617
Nucleotide Sequence
(Fasta)		ATGGTGGTGG TGGCGGTGGG AGGCGGGGGC GGCGGCGGGT GGGGGACGTG GGAGGAGCTG 60
GTGCTGGGCG GCGCCGTGCT ACGCCACGGG GGCGCCGCGT GGGCCGCCGT CGCCGACGAG 120
CTCCGGACCC GCTCCCCGTG CGCCTTCTCG CCCGAGGAAT GTGAAGCAAA ATTTGCAGAG 180
ATACAGTCAC GCTACTCCCC ATGCAATGCT TGGTTTGAAG AGCTTCGCAA GCAGAGAGTT 240
GCTGAACTGA AAAGGGAATT GGAGAAGTCA GAAAATTCTA TTGGATCCCT CCAATCTGTG 300
ATTGAAAGCC TCAGCAATAG CAAACATGGT GACGGGAGTT CTGAATGCCG CACCAGTCAT 360
ACTGAATCAT GTTCGCACTC CGAAAATATA GCAGATACTT CCTCAGGTAA AGAAGCATCC 420
AGAGACAGAT CATCAGCAGC TAGTTTCACA GAGGAAGCAA GCAACAGTCA GAAATCTCAG 480
CAAGTGCAGC GGTGTGATAC TGATTCAATT CAAGCTAATA ATCCATCACC AGATGAGCCA 540
TATCCCCAGG CCCAAGTTGA GAAGGTCTGC CCCAAAGATA GCTTGCTTTG GGGTTCTAGA 600
AAGCAAAGAG GAAGGAGAGC TAGAAGGACT CTTATAAAAG GTGGTCATAG TAGTAGAGAT 660
GGTGACCCTA CATCTACAGC GTGCATAGAA GAGAGGGAGG GTTCCTCTGA AGGCTGCATG 720
ACGGACTTGA AAAGTCCAAA GGTAGAATCT ATTGTGGTGA AGAAGGGTTT GAAATCTCCA 780
AAGGTAGAAT CTAGTGTGAT GAATAAGGAT TTGAAAACTC CAAATGTGGG ATCTGGTGTA 840
ATGAAGAAGG GTTTGAAAAC TCCAAATGGA GAATCTGATG TGATGAAGAA GGGCTTGAAA 900
TCTCCCAAAG CAGAATCGGA TGTTTTGAAG GGCTTGAAAA CTCCCAAAGC AGAATCTGAT 960
GTCACGAAGA AGGGCTTGAA AACTCCCAAA GCAGAATCTG ATGTCACGAA GAAGGGCTTG 1020
AAAACTCCTA AAGCAGAATC TGATTTCATG AAGAAGGGCT TGAAAACTCC TAAAGCAGAA 1080
TCTGATGTCA TGAAGAAGGG CTTGAAAACT CCAAAGGCAG AATGTGGTCA GGCTGTGGTT 1140
GAGAAAATTA AACAAAAGCT GACAGAGATT TTGAGTTCTA TATCCACTCA AGGTGACTGT 1200
TTAATGTTGC AACGCCAACT TGATACCCAG AGGAAAAGGG TTAGATACAA GAAGATGATT 1260
CGCCGGCATA TGGACTTCCG GACCCTTCAC TCTAAGATCA AGAGTGGCGC CATCTCTTCC 1320
ACCAAGGAGC TTCTGAGAGA CATTCTCATT TTTGTGAATA ATGTAATAGC TTTCTACCCA 1380
AAGGCTACAT TGGAGCATAT GGCTGCAGTT GAGCTTCGGG GCTTTGCATG CAAAACTGTA 1440
ATGCAGAGTA CAAGTTTGCT CTTGAAGAGC CATGGAGAGA CGGGAACAGC TGGTGCCTCT 1500
GTAGTGAAGC AGAATGCTCG AGCCCTGCAG CCTGGACGTC CTGGCCCTGG TGATGCAAGG 1560
GGAAGCAAGG TTGCTTCAAA GGAAGCTACT GCCAAGGAGG GTGAGGGCAA GAGCTCTCGC 1620
AGTGATACAT CATTAACAGC TAATCAAAAG ACTACCCAGA GAAATGAGCC GGACAAGAAG 1680
AGAGGCGTTG GTCGGCCTCC AAAGAGTGGG CAGAAGACTG CTGGGGCACA GGAAGATAAC 1740
CCCAGTAAAG GCAGGAAGAG GGGTGCTGGT GCACAGGTAG ATAGCCCCAG CAAAGGCAGG 1800
AAGAGGAGTG CTGAGGATAG CATCAGCAAA GGCGGCAAGA AGAGCCGGCG GTGAAGCTAC 1860
CATCAGCTCG ATGCAAAACT GTGTACAGCT TTAACCATAT CATAGGCTAG TCCCTTCCAG 1920
ACGGTGTTGT TTACCTGGCA AAAAACCTGT GGCCCAGTAA TCAAACTGAT GTAACAGGAA 1980
GGGATAGCTG TTTTTGGTGT TTTTTTTTTG TAAGGGCTGA GGAGCGAGGA GTAAGGACAG 2040
TTAGAAGGGA ACCCTTATTT GCCTGTAGAG ATTTTCCGAG TTAGGCTATA CATGTTTGAC 2100
TGTGTAATGT TGCAGTTTCC AGATTAAAGG TATCTGGACG AGCA 2145
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0035 Sb02g036530.1 Sorghum bicolor 77 0.0 850
WERAM-Zem-0131 GRMZM2G402804_P01 Zea mays 73 0.0 803
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 66 2e-82 304
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 66 2e-82 304
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 66 2e-82 304
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 65 9e-82 301
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 63 4e-74 276
WERAM-Tru-0068 TRIUR3_26205-P1 Triticum urartu 62 4e-73 273
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 61 2e-72 271
WERAM-Aet-0053 EMT30824 Aegilops tauschii 61 2e-68 258
WERAM-Brd-0012 BRADI1G24580.1 Brachypodium distachyon 63 3e-64 243
WERAM-Thc-0079 EOY28363 Theobroma cacao 54 4e-29 127
WERAM-Prp-0058 EMJ13280 Prunus persica 47 1e-26 119
WERAM-Met-0107 AES90380 Medicago truncatula 51 2e-25 115
WERAM-Art-0022 AT1G61215.1 Arabidopsis thaliana 50 1e-24 112
WERAM-Amt-0004 ERN03421 Amborella trichopoda 53 2e-24 111
WERAM-Arl-0120 scaffold_200471.1 Arabidopsis lyrata 49 2e-24 111
WERAM-Glm-0167 GLYMA13G31800.1 Glycine max 43 3e-24 110
WERAM-Sol-0123 Solyc10g009160.2.1 Solanum lycopersicum 54 2e-23 108
WERAM-Sot-0030 PGSC0003DMT400028077 Solanum tuberosum 63 2e-22 105
WERAM-Bro-0071 Bo4g086660.1 Brassica oleracea 41 1e-21 102
WERAM-Brr-0154 Bra031444.1-P Brassica rapa 40 1e-20 99.0
WERAM-Pot-0044 POPTR_0004s03710.1 Populus trichocarpa 50 1e-17 89.0
WERAM-Sem-0102 EFJ33930 Selaginella moellendorffii 34 4e-15 80.5
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 34 1e-13 75.9
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 40 1e-13 75.5
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 35 1e-13 75.5
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 40 4e-13 73.9
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 40 7e-13 73.2
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 39 2e-12 72.0
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 33 3e-12 71.2
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 37 1e-07 55.8
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 30 5e-07 53.9
Created Date 25-Jun-2016