WERAM Information

Tag Content
WERAM ID WERAM-Sob-0037
Ensembl Protein ID Sb02g038980.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g038980 Sb02g038980.1 Sb02g038980.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.80e-13 49.6 204 253
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    t+C +C++++  ++++++Cd C++wfH+kCvk++  +++  k++ CpsC+
  Sb02g038980.1 204 TLCGACKESYGPDEFWICCDLCEKWFHGKCVKITAAKAEHIKQYKCPSCT 253
                    78****888888999*******************666664479******7 PP
Protein Sequence
(Fasta)		MDSGYNPRTV EEVFRDFKGR RAGIIRALTT DAEDFFKQCD PEKENLCLYG FPNESWEVNL 60
PAEEVPPELP EPALGINFAR DGMQEKEWLS MVAAHSDAWL LSVAFYFGAR FGFNRNDRKR 120
LYSLIDDLPM AFEIVSGKSE TKAPAPAPPT PNSSNHSNIK SKSNNKKKPS EPKVKQTKPR 180
APAEEGPGGE EEDGSASEGE HGETLCGACK ESYGPDEFWI CCDLCEKWFH GKCVKITAAK 240
AEHIKQYKCP SCTGGGGVGN SGTKRARPS 269
Nucleotide Sequence
(Fasta)		GCAGCAAATC TTTTGCAGCA CCGGCAGCGC TCGATTCCTG CAATCCGCCG CTCCGAATGG 60
ACTCAGGGTA CAACCCCCGG ACGGTGGAGG AGGTGTTCCG GGACTTCAAG GGCCGCCGCG 120
CCGGGATAAT CCGCGCGCTC ACCACTGATG CGGAGGATTT CTTCAAGCAA TGCGACCCGG 180
AAAAAGAAAA TTTGTGCCTG TATGGGTTTC CTAATGAGAG CTGGGAAGTG AATTTGCCTG 240
CTGAAGAGGT TCCACCTGAG CTCCCAGAAC CAGCATTAGG CATAAACTTT GCAAGAGATG 300
GAATGCAGGA AAAAGAGTGG TTGTCCATGG TTGCTGCACA CAGTGATGCA TGGTTACTTT 360
CTGTTGCATT TTACTTTGGC GCTCGATTTG GTTTCAATAG AAATGACAGG AAGCGCCTCT 420
ATAGTTTGAT TGATGATCTT CCCATGGCTT TTGAAATTGT TAGTGGGAAG AGTGAAACCA 480
AGGCACCAGC ACCAGCGCCA CCAACACCAA ACAGTAGTAA CCATAGCAAT ATCAAATCGA 540
AGTCTAACAA CAAAAAGAAA CCATCGGAGC CTAAGGTGAA GCAGACAAAG CCGCGTGCCC 600
CTGCAGAGGA AGGCCCGGGC GGTGAGGAGG AAGATGGCAG TGCAAGCGAG GGCGAGCACG 660
GGGAGACGCT GTGCGGCGCG TGCAAGGAAA GCTACGGCCC CGATGAGTTT TGGATCTGCT 720
GCGACCTCTG CGAGAAGTGG TTCCACGGCA AGTGCGTCAA GATCACGGCG GCCAAGGCCG 780
AGCACATCAA GCAGTACAAG TGCCCGTCCT GCACCGGCGG CGGTGGTGTC GGCAACAGCG 840
GCACCAAGCG AGCCCGCCCA TCTTAAGGTG GCCGGTAAGC TGCGGTTGGC AAAGCTGTTG 900
CGGACTAGCT GCAATGGCTG CAAACTTTCA ATGGTGGTGT AAACTTTTGT AGTGCGGCTA 960
GGCTGTTTGT AACCTGTCAT ACTTGGCTTG AAGTAGGTTT CATGTTCTTC AATTTTCATT 1020
AGCATTTGCC 1031
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0026 GRMZM2G038066_P01 Zea mays 84 4e-96 348
WERAM-Sei-0118 Si030765m Setaria italica 74 2e-89 326
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 67 8e-82 300
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 68 9e-82 300
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 66 2e-81 299
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 70 2e-81 299
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 64 1e-78 290
WERAM-Met-0172 KEH18446 Medicago truncatula 64 2e-78 289
WERAM-Glm-0075 GLYMA07G04040.1 Glycine max 65 2e-78 289
WERAM-Prp-0082 EMJ27202 Prunus persica 65 4e-78 288
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 65 5e-78 288
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 61 2e-77 286
WERAM-Viv-0061 VIT_09s0002g01600.t01 Vitis vinifera 63 3e-77 285
WERAM-Amt-0032 ERN11177 Amborella trichopoda 65 2e-76 283
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 65 2e-76 283
WERAM-Thc-0077 EOY27191 Theobroma cacao 63 2e-76 282
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 63 2e-75 279
WERAM-Aet-0091 EMT03181 Aegilops tauschii 56 1e-73 273
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 62 1e-73 273
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 61 2e-73 272
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 62 4e-73 271
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 58 2e-70 262
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 58 2e-70 262
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 58 2e-70 262
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 58 2e-70 262
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 58 2e-70 262
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 58 2e-70 262
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 58 2e-70 262
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 58 2e-70 262
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 59 3e-70 262
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 58 5e-70 261
WERAM-Php-0091 PP1S38_137V6.1 Physcomitrella patens 59 9e-68 254
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 56 2e-62 236
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 57 4e-61 231
Created Date 25-Jun-2016