WERAM Information

Tag Content
WERAM ID WERAM-Sob-0035
Ensembl Protein ID Sb02g036530.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g036530 Sb02g036530.1 Sb02g036530.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 9.30e-06 26.5 506 571
Organism Sorghum bicolor
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   3 hevsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenk 68 
                    ++++++++++ d q +   Y+++i+++md+    +++++g  s  +e+++D+   +nN  a++++ 
  Sb02g036530.1 506 QDDCKMLQRQLDTQRKRARYKKMIRRHMDFRILHSKVKSGAISCTKELLRDMLIFINNVIAFYPKA 571
                    688999*******988999*******************************************9875 PP
Protein Sequence
(Fasta)		MTSALFSDTD PIQSPSGHPI PNSNALLHGR NGKKKKVERR PPPNVPTSHA RISRPSPRHP 60
HETTNRNPKM KNPITTLRYA SPKKQQAGAG QTRPPPRNRD DPTPCPPLLL TSLSDSYWLS 120
TARLPRDQAE ADQSRQPMVV VAVGGGGGGG GWGTWEELVL GGAVLRHGGA AWATVADELR 180
TRSPCTFSPE ECEAKFAEIQ LRYSACNAWF EELRKQRVAE LKRDLEKSEN SIGSLQSVIQ 240
SLSNSKHVDG SSECRTSHTE SCPRSENTAD TNSSGKETSR DRSSAASFTE EASNSQKCQK 300
VQQCDTDSIQ AINPSPDESY PQAQVEKVGP KDGLLWGSRK QRGRRARRTL LKGGDSSGDG 360
EPTSTACIQR EGSSEGCMKN LKTPNVESVV MKKGVKTPKV ESGVMNKDLN TPNVGSGVKK 420
GLKTPKVESD MMKKAVRTPK AESDVMKKGL KISKVEPDVI KDLKTPKAGS DVMKKGLRSP 480
NAECVQPVIE RVKLKLAEIL NTISTQDDCK MLQRQLDTQR KRARYKKMIR RHMDFRILHS 540
KVKSGAISCT KELLRDMLIF INNVIAFYPK ATLEHMAAVE LRDFVCKTVK QSASLFLKSH 600
GETRTAGASV VKKNARALQP GRPGPGDARA IKVSSRDATA KEGDGKRPCS DELANQKTIQ 660
RNEQAKKRGV GRPPKSGQRI AEAQEDSPIK GRKRGAGALV LVDSPSKGRK RSAAAQEDSP 720
SKGGKKSRR 729
Nucleotide Sequence
(Fasta)		ATGACCTCGG CGCTTTTTTC CGACACGGAC CCAATTCAGT CCCCGTCGGG TCATCCGATT 60
CCGAATTCCA ATGCACTGCT CCATGGTCGC AACGGAAAAA AAAAAAAGGT AGAGCGGCGC 120
CCACCACCCA ACGTCCCCAC GTCACACGCA CGCATCTCCC GCCCGAGTCC GAGGCATCCG 180
CACGAAACCA CGAACAGGAA CCCAAAAATG AAAAATCCCA TCACCACGCT ACGCTATGCG 240
AGCCCGAAAA AACAGCAGGC GGGGGCCGGG CAAACCAGAC CACCGCCCCG AAACCGCGAC 300
GACCCGACAC CTTGTCCACC TCTCCTCCTG ACCTCCCTTT CCGACTCCTA CTGGCTATCC 360
ACCGCCCGTC TCCCCCGCGA TCAAGCCGAA GCCGACCAGA GCCGGCAACC GATGGTGGTG 420
GTGGCGGTGG GAGGGGGCGG CGGCGGGGGC GGCTGGGGGA CGTGGGAGGA GCTGGTGCTG 480
GGCGGCGCAG TGCTCCGGCA TGGGGGCGCC GCGTGGGCCA CCGTTGCAGA CGAGCTCCGG 540
ACCCGCTCCC CGTGCACCTT CTCGCCCGAG GAATGTGAAG CAAAATTTGC AGAGATACAG 600
TTGCGGTACT CTGCATGCAA TGCTTGGTTT GAGGAGCTTC GTAAGCAGAG AGTTGCTGAA 660
CTCAAAAGGG ATTTGGAGAA GTCAGAAAAT TCTATTGGAT CTCTCCAATC TGTTATTCAA 720
AGCCTCAGCA ATAGCAAACA TGTTGATGGG AGTTCTGAAT GCCGCACCAG TCATACCGAA 780
TCATGTCCGC GCTCCGAAAA TACAGCAGAT ACTAATTCCT CAGGTAAAGA AACGTCCAGG 840
GATAGATCGT CAGCTGCTAG TTTCACAGAG GAAGCAAGCA ACAGTCAGAA ATGTCAGAAA 900
GTGCAGCAGT GTGATACTGA TTCAATTCAA GCTATCAATC CATCACCAGA TGAGTCATAT 960
CCCCAGGCCC AAGTTGAAAA GGTCGGTCCC AAAGATGGCT TGCTTTGGGG TTCTAGAAAA 1020
CAAAGAGGAA GGAGAGCTAG AAGGACACTT TTGAAAGGTG GTGATAGTAG TGGGGATGGT 1080
GAGCCAACAT CTACAGCATG CATACAGAGG GAGGGTTCGT CTGAAGGCTG CATGAAGAAC 1140
TTGAAAACTC CAAATGTGGA ATCAGTTGTT ATGAAGAAGG GTGTGAAAAC TCCAAAGGTA 1200
GAATCTGGTG TGATGAATAA GGATTTGAAT ACTCCAAATG TAGGATCTGG TGTAAAGAAG 1260
GGCTTGAAAA CTCCCAAAGT AGAATCTGAT ATGATGAAGA AGGCTGTGAG AACTCCTAAA 1320
GCAGAATCTG ATGTTATGAA GAAGGGGTTG AAAATTTCCA AAGTAGAACC TGATGTTATA 1380
AAGGATTTGA AAACTCCCAA AGCAGGATCT GATGTTATGA AGAAGGGCTT GAGATCTCCA 1440
AATGCAGAAT GTGTCCAGCC TGTGATTGAG AGAGTTAAAC TGAAGCTGGC AGAAATTTTG 1500
AATACTATAT CGACTCAAGA TGACTGCAAA ATGTTGCAAC GCCAACTTGA TACCCAGAGG 1560
AAAAGAGCTA GATATAAGAA GATGATTCGC CGGCATATGG ACTTCCGAAT ACTTCACTCT 1620
AAGGTCAAGA GTGGCGCAAT CTCTTGCACC AAGGAGCTTC TGAGAGATAT GCTCATTTTC 1680
ATCAATAATG TAATAGCCTT CTACCCGAAG GCTACATTGG AGCACATGGC TGCGGTTGAG 1740
CTTCGTGACT TTGTATGCAA AACAGTGAAG CAGAGTGCAA GCTTGTTCTT GAAAAGCCAT 1800
GGAGAGACCA GAACAGCTGG TGCCTCTGTG GTAAAGAAGA ATGCTCGAGC CCTGCAGCCT 1860
GGACGCCCTG GCCCTGGTGA TGCAAGGGCA ATCAAGGTTT CTTCAAGGGA CGCTACTGCC 1920
AAGGAAGGAG ATGGCAAGAG ACCTTGCAGT GATGAGCTGG CTAATCAAAA GACTATACAG 1980
AGAAATGAGC AAGCCAAGAA GAGAGGTGTG GGTCGGCCTC CAAAGAGTGG GCAGAGGATT 2040
GCTGAGGCAC AGGAAGATAG CCCCATCAAA GGCCGGAAAA GGGGCGCTGG GGCACTGGTA 2100
CTGGTAGATA GCCCCAGCAA AGGCAGGAAG AGGAGTGCGG CAGCACAGGA GGATAGCCCC 2160
AGCAAAGGGG GCAAGAAGAG CCGGCGGTGA 2191
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0131 GRMZM2G402804_P01 Zea mays 87 0.0 953
WERAM-Sei-0112 Si029233m Setaria italica 77 0.0 853
WERAM-Tru-0068 TRIUR3_26205-P1 Triticum urartu 49 1e-119 428
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 55 7e-116 415
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 57 3e-115 413
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 62 5e-77 286
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 62 5e-77 286
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 62 5e-77 286
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 62 5e-77 286
WERAM-Aet-0053 EMT30824 Aegilops tauschii 61 1e-67 255
WERAM-Brd-0012 BRADI1G24580.1 Brachypodium distachyon 63 4e-64 243
WERAM-Thc-0079 EOY28363 Theobroma cacao 52 1e-28 125
WERAM-Art-0022 AT1G61215.1 Arabidopsis thaliana 51 3e-27 120
WERAM-Arl-0120 scaffold_200471.1 Arabidopsis lyrata 51 8e-27 119
WERAM-Met-0107 AES90380 Medicago truncatula 47 2e-26 118
WERAM-Prp-0058 EMJ13280 Prunus persica 47 3e-26 117
WERAM-Glm-0191 GLYMA15G07500.1 Glycine max 49 2e-25 115
WERAM-Bro-0071 Bo4g086660.1 Brassica oleracea 46 4e-23 107
WERAM-Amt-0004 ERN03421 Amborella trichopoda 57 2e-22 105
WERAM-Sol-0123 Solyc10g009160.2.1 Solanum lycopersicum 61 3e-22 104
WERAM-Brr-0154 Bra031444.1-P Brassica rapa 44 4e-22 104
WERAM-Sot-0030 PGSC0003DMT400028077 Solanum tuberosum 60 2e-21 101
WERAM-Pot-0044 POPTR_0004s03710.1 Populus trichocarpa 50 1e-18 92.8
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 33 1e-14 79.7
WERAM-Sem-0102 EFJ33930 Selaginella moellendorffii 37 3e-14 77.8
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 33 7e-13 73.6
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 37 1e-12 72.8
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 40 2e-12 72.4
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 36 4e-12 70.9
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 31 7e-12 70.1
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 35 1e-11 69.3
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 32 9e-07 53.1
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 31 2e-06 52.0
Created Date 25-Jun-2016