WERAM Information

Tag Content
WERAM ID WERAM-Pot-0173
Ensembl Protein ID POPTR_0606s00210.1
Gene Name POPTR_0606s00210g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0606s00210 POPTR_0606s00210.1 POPTR_0606s00210.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.60e-12 48.6 200 248
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                         +C +Cg+++  ++++++Cd C++wfH+kCvk++  +++  k++ CpsC 
  POPTR_0606s00210.1 200 TCGACGESYGTDEFWICCDMCEKWFHGKCVKITPAKAEHIKQYKCPSCS 248
                         7****999999999*******************555554479******7 PP
Protein Sequence
(Fasta)		MEGTPHPIPR TVEEVFSDFK GRRSGLIKAL TSDVEKFYQQ CDPDKENLCL YGLPNETWEV 60
NLPVEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDS WLLAVAFYFG ARFGFGKNER 120
KRLFQMINEL PTIFEAVSGN VKQPKDQTAT HNNSGKSKSS GKMQSRQPES QTKAIKVSAP 180
PKEDYESGEE EEEDDEQGAT CGACGESYGT DEFWICCDMC EKWFHGKCVK ITPAKAEHIK 240
QYKCPSCSGK RARV 254
Nucleotide Sequence
(Fasta)		TCTGTTTACC CACAAATCAA ATCGGAAAAA AAAATTGAAA AACAAGAGAG GAGAGCAGAG 60
CAGAGCAGCA AACCCTAGGC TAGGAGGAGG GCCTTATTTC ATCTATGAAC AACAAAAACC 120
CTAATTAATT CCTTCAATTA AGGCCACAAA CTGCATTATT ATCTCGTTTT CTTGAGAGAT 180
ATAGACAGAG AGAGAGAGAG ATTGTAAATG GAGGGAACAC CGCATCCTAT ACCGCGTACC 240
GTTGAAGAAG TTTTTAGTGA TTTCAAAGGC AGACGCTCTG GTTTAATCAA GGCTCTTACT 300
TCCGATGTTG AGAAGTTTTA CCAGCAGTGT GACCCTGATA AGGAGAACTT GTGTCTCTAT 360
GGACTTCCAA ATGAGACATG GGAAGTTAAC CTGCCTGTGG AGGAGGTGCC CCCTGAACTT 420
CCTGAGCCTG CACTAGGTAT AAATTTTGCC AGGGATGGGA TGCAAGAGAA GGACTGGTTA 480
TCCCTTGTTG CAGTTCACAG TGATTCATGG TTGCTTGCTG TTGCATTTTA TTTTGGTGCA 540
CGTTTTGGGT TTGGTAAGAA TGAAAGGAAG AGGCTTTTCC AGATGATAAA TGAGCTCCCC 600
ACAATATTCG AGGCCGTGTC TGGAAATGTT AAGCAACCTA AGGACCAAAC TGCCACTCAC 660
AACAACAGTG GCAAAAGCAA ATCAAGTGGG AAGATGCAAT CCCGGCAACC TGAGTCCCAG 720
ACTAAGGCTA TAAAGGTATC TGCACCACCC AAGGAAGACT ATGAGAGTGG GGAAGAGGAA 780
GAAGAAGACG ATGAACAGGG TGCTACTTGT GGAGCATGTG GTGAAAGCTA TGGAACTGAT 840
GAGTTCTGGA TTTGCTGTGA TATGTGTGAG AAATGGTTCC ATGGAAAATG CGTCAAGATT 900
ACACCTGCCA AAGCTGAGCA CATCAAGCAG TACAAGTGCC CAAGTTGCAG TGGCAAGAGA 960
GCTAGGGTTT AAAGTTAGAT GCTGGAAGTC AAAGATGAAC ATCATTTAAA CAAAGCAGAC 1020
AAGGGGTAGA AGTTTTTCTT TAACGTTTTT AAAGTTGATC AGAACCAGTT GTCCACTTTA 1080
GTCAATGAAT TTGAATAACT GCAGATTGGA TTTCTAAGTT TGGCTACTCA TTGTTCCTTC 1140
TGTCTAATTT TCTTCGGAAT TGTGCTGTTA AATAGTTGGT GGCAATTGTA GCTATTTTCT 1200
TCATATATCG TTGGTGCATT TTTTCAGTTT GTGGATGCAA TGTTTTTTTC TACAGCCTCC 1260
TCTCAAATGA CTCCCCTCCC CTTCCACCAG ATCGAAGCGT GGAAAAGGAT TTGTTGTCTT 1320
TTGTGTTTCT TGATTCCCAA GAGGGGATTT GATTTGAGGA ACCCCAGAGT GTGGGAACGT 1380
AGTGTAGGAT CGAGAAAGAG AATTTTTTTT TTTTTTTTTT TCTTAAGATG CTAGTTGTAC 1440
ATTTTTGTAC TATTTTTGCA TGAAATATTT TGACCTATCA ATTAGTTGGA ATTGGAGAGA 1500
ATTAGTAA 1509
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 87 5e-108 387
WERAM-Thc-0075 EOY26404 Theobroma cacao 84 1e-105 379
WERAM-Prp-0081 EMJ24886 Prunus persica 85 2e-105 379
WERAM-Met-0117 KEH32736 Medicago truncatula 82 9e-104 373
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 85 2e-103 372
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 80 2e-100 362
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 78 3e-100 361
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 82 9e-96 347
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 81 1e-95 346
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 75 2e-94 342
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 75 6e-94 340
WERAM-Amt-0088 ERM99796 Amborella trichopoda 76 3e-90 328
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 71 6e-87 317
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 69 2e-83 305
WERAM-Sei-0086 Si023009m Setaria italica 69 2e-82 302
WERAM-Zem-0090 GRMZM2G158918_P01 Zea mays 68 4e-81 298
WERAM-Aet-0106 EMT19247 Aegilops tauschii 66 4e-81 298
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 72 2e-80 295
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 67 2e-80 295
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 72 2e-80 295
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 65 2e-80 295
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 72 2e-80 295
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 72 2e-80 295
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 72 2e-80 295
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 72 2e-80 295
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 72 2e-80 295
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 72 2e-80 295
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 72 2e-80 295
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 67 4e-80 295
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 73 1e-79 293
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 67 2e-76 282
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 67 8e-76 280
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 65 6e-74 274
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 72 2e-73 272
Created Date 25-Jun-2016