WERAM Information

Tag Content
WERAM ID WERAM-Sot-0067
Ensembl Protein ID PGSC0003DMT400055008
Gene Name PGSC0003DMG400021346
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400021346 PGSC0003DMT400055008 PGSC0003DMT400055008
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JmjC_only 1.80e-45 155.7 266 413
Organism Solanum tuberosum
Domain Profile
  HDM JmjC_only
         JmjC_only.txt   3 edylvpktfsdqlwqlkeelsepfyclvgsn.......wfltGpassgfplHvddieaflvqveGrkrwrlyepsepaellk.....la 79 
                            +yl++++++dq+++l++++ +p+yc+ g +       wf  Gpa++++plH+d+++++l+qv G+k+ rly+ s ++el +     l 
  PGSC0003DMT400055008 266 TTYLAQHQLFDQIQELRQDIVIPDYCFTGGGeirslnaWF--GPARTVTPLHHDPHHNILAQVVGKKYVRLYSASLSDELHPhsetmLS 352
                           68**************************************..***********************************99999******* PP
         JmjC_only.txt  80 sdeqvkqedllltkftliaprplletvlepgellyiprgtwHqalsldvtlsvsqnfsset 140
                           +++qv+ +++++++f+ i + ++++++le+ge+lyip+++wH+++sl++++svs+++s ++
  PGSC0003DMT400055008 353 NSSQVDLDNIDEKEFPNILDLEFQDCILEEGEMLYIPPKWWHYVRSLTTSFSVSFWWSDAE 413
                           *********************************************************9765 PP
Protein Sequence
(Fasta)		MSTSAADAVA GEIAGSDDGV LETPFLDSER WNILQSIAEE GGYAYATMTS LAAAGDIRAA 60
EAAKEMAWEQ LHSGPWHSVV PIWRDAYSMA CMHLAKLHYA NGEFNQAIKA LDMGIIMGGM 120
MLRDELNLAI RKASEKEKAR SDLGDKGESE IKFVSQEINV AEVQQSLPIK SLSCKLVGKS 180
PALSLEAFLR DHYLSGTPVV IRDSMDHWPA KSKWNDMNYL RRVAGFRTVP VEVGKNYLCP 240
EWKQELITFS EFLERTRSND TTSVETTYLA QHQLFDQIQE LRQDIVIPDY CFTGGGEIRS 300
LNAWFGPART VTPLHHDPHH NILAQVVGKK YVRLYSASLS DELHPHSETM LSNSSQVDLD 360
NIDEKEFPNI LDLEFQDCIL EEGEMLYIPP KWWHYVRSLT TSFSVSFWWS DAEKLDD 417
Nucleotide Sequence
(Fasta)		ATTTCCATCA AATGCAATGC GCTTTTTCCC ATAATTAAAG GACCCAAAAA AGCAAAAACA 60
AAAATATCTT CTTTACTCAC CGAATCTTCT AGAACACAAC TGCATTTTTT CACTATGTCC 120
ACGTCAGCAG CCGACGCCGT GGCCGGAGAA ATCGCTGGTT CCGACGACGG TGTTCTAGAA 180
ACTCCATTCC TAGACTCGGA ACGTTGGAAC ATCCTCCAGA GTATAGCGGA GGAAGGAGGC 240
TACGCATACG CAACCATGAC GTCGCTCGCG GCGGCCGGAG ATATACGAGC GGCGGAGGCG 300
GCGAAGGAGA TGGCGTGGGA ACAGTTACAT TCAGGTCCAT GGCATTCGGT TGTGCCTATA 360
TGGAGAGATG CGTATTCAAT GGCGTGTATG CATTTGGCGA AACTTCATTA TGCTAATGGT 420
GAGTTTAATC AGGCGATTAA AGCTTTAGAT ATGGGGATTA TTATGGGAGG AATGATGCTT 480
AGGGATGAAC TGAACCTCGC GATTCGAAAG GCGTCGGAGA AGGAGAAAGC TCGGAGTGAT 540
CTCGGAGATA AAGGTGAATC CGAGATTAAA TTTGTTTCTC AAGAAATTAA CGTGGCGGAG 600
GTGCAGCAGT CGCTACCTAT TAAGTCTCTG TCTTGTAAGT TAGTAGGGAA AAGTCCAGCC 660
TTATCGTTGG AGGCATTCCT GAGAGACCAT TATTTATCAG GAACTCCGGT GGTAATCAGA 720
GATTCCATGG ATCACTGGCC TGCTAAGAGT AAGTGGAATG ACATGAATTA TCTTAGAAGG 780
GTTGCTGGCT TCCGTACAGT CCCCGTTGAG GTTGGAAAGA ACTATTTGTG CCCAGAATGG 840
AAGCAAGAGC TGATCACATT CTCTGAATTT CTCGAGAGAA CTCGATCCAA TGATACTACC 900
TCTGTGGAAA CTACGTACTT AGCTCAGCAT CAATTATTTG ATCAGATACA AGAGCTACGG 960
CAAGATATTG TTATTCCTGA TTATTGTTTT ACTGGAGGTG GGGAAATCAG GTCGCTTAAT 1020
GCTTGGTTTG GTCCAGCCCG GACTGTGACG CCTTTGCATC ATGATCCTCA CCATAATATA 1080
CTTGCTCAGG TTGTTGGCAA AAAGTATGTA CGGCTTTACT CAGCGTCACT TTCGGATGAG 1140
CTTCACCCAC ATAGTGAAAC CATGCTTAGC AATTCCAGCC AGGTTGATCT AGACAACATT 1200
GACGAGAAAG AGTTCCCAAA TATATTAGAC CTGGAATTCC AGGACTGTAT TTTAGAGGAA 1260
GGTGAGATGC TTTACATTCC CCCTAAATGG TGGCACTACG TCCGCTCTCT CACGACAAGC 1320
TTTTCAGTTA GCTTTTGGTG GAGTGATGCT GAAAAATTAG ACGACTGATC GGTCTCATCT 1380
GGTGTATACA AAGGAACCAG TTCAACCATC ATTCTTCTGC AGATAGCAAT GTGGACTTCA 1440
CCACTACTAA TGCATTAACT GTCATTGTCC AGTGTGATTG TTTCAGCTCC AAGTAGCCTT 1500
GTTGTCTTTG AGACTTTAAT GATGAATTTT TCAAAGAGGT GGCAATCTTG CTTTATTACT 1560
TGAAGGTTTG TCTGATCATT ATCATGAATT TGGTAAATAA GGTGAAAATG AATTTATTTT 1620
CTTATTTGGA ATTGAGGTAT AGTTATTGTT GTAGGATTTC GCGAGATGAA ATGATAAAAA 1680
GGTTCAGAAT TGTTGGTTTC ACGAGT 1707
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Met-0103 KEH30262 Medicago truncatula 71 8e-157 550
WERAM-Viv-0032 VIT_06s0004g01630.t01 Vitis vinifera 69 6e-156 547
WERAM-Thc-0109 EOY32544 Theobroma cacao 68 9e-155 543
WERAM-Glm-0128 GLYMA11G13911.1 Glycine max 71 9e-155 543
WERAM-Pot-0003 POPTR_0001s05390.1 Populus trichocarpa 69 5e-154 541
WERAM-Brr-0177 Bra035742.1-P Brassica rapa 67 4e-152 535
WERAM-Bro-0097 Bo5g106210.1 Brassica oleracea 68 1e-151 533
WERAM-Arl-0063 fgenesh2_kg.3__ 2308__ AT3G20810.2 Arabidopsis lyrata 66 3e-150 528
WERAM-Art-0076 AT3G20810.2 Arabidopsis thaliana 67 4e-150 528
WERAM-Prp-0114 EMJ09022 Prunus persica 66 2e-147 519
WERAM-Mua-0127 GSMUA_Achr8P25590_001 Musa acuminata 59 1e-132 470
WERAM-Lep-0101 LPERR09G10850.1 Leersia perrieri 58 2e-119 426
WERAM-Zem-0040 GRMZM2G052908_P01 Zea mays 57 4e-118 422
WERAM-Ors-0093 OS09T0489200-00 Oryza sativa 56 4e-118 422
WERAM-Orgl-0101 OGLUM09G15350.1 Oryza glumaepatula 55 1e-117 420
WERAM-Sei-0115 Si029989m Setaria italica 57 1e-117 420
WERAM-Sob-0030 Sb02g028370.1 Sorghum bicolor 56 6e-117 418
WERAM-Ori-0103 BGIOSGA029547-PA Oryza indica 53 1e-113 407
WERAM-Brd-0110 BRADI4G33727.1 Brachypodium distachyon 58 4e-108 389
WERAM-Php-0008 PP1S105_124V6.1 Physcomitrella patens 51 3e-105 379
WERAM-Orr-0098 ORUFI08G22350.2 Oryza rufipogon 56 8e-104 374
WERAM-Tra-0293 Traes_7AS_08AEBE00A.2 Triticum aestivum 66 5e-103 372
WERAM-Tru-0087 TRIUR3_31518-P1 Triticum urartu 65 6e-103 371
WERAM-Sem-0129 EFJ37386 Selaginella moellendorffii 50 7e-99 358
WERAM-Orbr-0102 OB08G26850.1 Oryza brachyantha 63 3e-98 355
WERAM-Orni-0094 ONIVA08G22510.3 Oryza nivara 51 2e-87 320
WERAM-Hov-0087 MLOC_65982.1 Hordeum vulgare 68 1e-78 290
WERAM-Tag-0119 ENSTGUP00000009777.1 Taeniopygia guttata 42 2e-73 273
WERAM-Sah-0112 ENSSHAP00000012011.1 Sarcophilus harrisii 41 6e-73 272
WERAM-Ten-0217 ENSTNIP00000021769.1 Tetraodon nigroviridis 42 1e-72 271
WERAM-Loa-0169 ENSLAFP00000015542.3 Loxodonta africana 43 2e-72 270
WERAM-Prc-0093 ENSPCAP00000008339.1 Procavia capensis 44 3e-72 270
WERAM-Mup-0147 ENSMPUP00000012892.1 Mustela putorius furo 41 3e-72 269
WERAM-Gaga-0066 ENSGALP00000010168.4 Gallus gallus 42 7e-72 268
WERAM-Aim-0052 ENSAMEP00000004259.1 Ailuropoda melanoleuca 40 3e-71 266
WERAM-Eqc-0005 ENSECAP00000000474.1 Equus caballus 43 4e-71 266
WERAM-Cap-0027 ENSCPOP00000002073.2 Cavia porcellus 41 4e-71 265
WERAM-Leo-0023 ENSLOCP00000004737.1 Lepisosteus oculatus 42 6e-71 265
WERAM-Orn-0019 ENSONIP00000001749.1 Oreochromis niloticus 42 1e-70 264
WERAM-Otg-0122 ENSOGAP00000010606.2 Otolemur garnettii 42 1e-70 264
WERAM-Fec-0011 ENSFCAP00000000891.3 Felis catus 42 2e-70 263
WERAM-Ptv-0038 ENSPVAP00000004151.1 Pteropus vampyrus 43 2e-70 263
WERAM-Orla-0050 ENSORLP00000006206.1 Oryzias latipes 42 2e-70 263
WERAM-Mod-0137 ENSMODP00000019296.2 Monodelphis domestica 41 5e-70 262
WERAM-Xet-0135 ENSXETP00000047024.2 Xenopus tropicalis 40 5e-70 262
WERAM-Tut-0101 ENSTTRP00000008521.1 Tursiops truncatus 43 6e-70 262
WERAM-Caf-0187 ENSCAFP00000025742.3 Canis familiaris 43 9e-70 261
WERAM-Myl-0091 ENSMLUP00000007518.2 Myotis lucifugus 41 9e-70 261
WERAM-Pof-0141 ENSPFOP00000011752.1 Poecilia formosa 41 1e-69 261
WERAM-Mum-0112 ENSMUSP00000033010.2 Mus musculus 41 2e-69 260
WERAM-Tar-0148 ENSTRUP00000031961.1 Takifugu rubripes 42 2e-69 260
WERAM-Ict-0169 ENSSTOP00000022768.1 Ictidomys tridecemlineatus 41 3e-69 259
WERAM-Gaa-0145 ENSGACP00000018511.1 Gasterosteus aculeatus 40 4e-69 259
WERAM-Lac-0048 ENSLACP00000007034.1 Latimeria chalumnae 42 4e-69 259
WERAM-Sus-0055 ENSSSCP00000008347.2 Sus scrofa 43 5e-69 259
WERAM-Nol-0122 ENSNLEP00000014249.2 Nomascus leucogenys 43 1e-68 258
WERAM-Gam-0047 ENSGMOP00000004939.1 Gadus morhua 41 2e-68 257
WERAM-Ran-0101 ENSRNOP00000020388.4 Rattus norvegicus 41 2e-68 256
WERAM-Pes-0097 ENSPSIP00000011968.1 Pelodiscus sinensis 42 2e-68 256
WERAM-Paa-0062 ENSPANP00000012432.1 Papio anubis 42 3e-68 256
WERAM-Hos-0166 ENSP00000286096.4 Homo sapiens 42 3e-68 256
WERAM-Ova-0201 ENSOARP00000020136.1 Ovis aries 42 3e-68 256
WERAM-Poa-0063 ENSPPYP00000008151.1 Pongo abelii 41 4e-68 256
WERAM-Gog-0074 ENSGGOP00000006358.2 Gorilla gorilla 41 4e-68 256
WERAM-Tub-0083 ENSTBEP00000009713.1 Tupaia belangeri 44 5e-68 255
WERAM-Bot-0170 ENSBTAP00000026023.5 Bos taurus 42 7e-68 255
WERAM-Xim-0107 ENSXMAP00000009477.1 Xiphophorus maculatus 41 7e-68 255
WERAM-Anc-0031 ENSACAP00000003528.2 Anolis carolinensis 41 1e-67 254
WERAM-Pat-0060 ENSPTRP00000013519.3 Pan troglodytes 41 1e-67 254
WERAM-Dio-0095 ENSDORP00000009624.1 Dipodomys ordii 40 2e-67 253
WERAM-Dan-0154 ENSDNOP00000024517.1 Dasypus novemcinctus 41 3e-67 253
WERAM-Chs-0075 ENSCSAP00000002744.1 Chlorocebus sabaeus 42 4e-67 252
WERAM-Mam-0145 ENSMMUP00000020806.2 Macaca mulatta 42 5e-67 252
WERAM-Dar-0218 ENSDARP00000133489.1 Danio rerio 42 2e-66 249
WERAM-Tas-0011 ENSTSYP00000001358.1 Tarsius syrichta 52 3e-66 249
WERAM-Ere-0039 ENSEEUP00000002911.1 Erinaceus europaeus 41 5e-66 249
WERAM-Fia-0169 ENSFALP00000014680.1 Ficedula albicollis 52 1e-65 247
WERAM-Anp-0138 ENSAPLP00000014931.1 Anas platyrhynchos 52 3e-63 239
WERAM-Chh-0005 ENSCHOP00000000442.1 Choloepus hoffmanni 38 1e-61 234
WERAM-Mae-0065 ENSMEUP00000005887.1 Macropus eugenii 36 2e-55 214
WERAM-Mim-0094 ENSMICP00000008672.1 Microcebus murinus 37 6e-54 209
WERAM-Caj-0217 ENSCJAP00000038116.2 Callithrix jacchus 38 1e-52 204
Created Date 25-Jun-2016