WERAM Information

Tag Content
WERAM ID WERAM-Sob-0030
Ensembl Protein ID Sb02g028370.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g028370 Sb02g028370.1 Sb02g028370.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JmjC_only 2.50e-43 148.1 261 406
Organism Sorghum bicolor
Domain Profile
  HDM JmjC_only
  JmjC_only.txt   3 edylvpktfsdqlwqlkeelsepfyclvgsn.......wfltGpassgfplHvddieaflvqveGrkrwrlyepsepaellk.....lasdeqvkq 86 
                     +yl+++++++q+++l e++  p yc +g +       wf  Gp+++++plH+d+++++l+qv Grk++rly+   +++l++     l++++qv+ 
  Sb02g028370.1 261 LTYLAQHPLFEQIKELSEDIVVPEYCYAGGGelqslnaWF--GPQGTVTPLHHDPHHNILAQVLGRKYIRLYPAFISEDLYPhtetmLCNTSQVDL 354
                    58***************************99*********..****************************************************** PP
  JmjC_only.txt  87 edllltkftliaprplletvlepgellyiprgtwHqalsldvtlsvsqnfss 138
                    ++++ ++f+ + + ++++++le+g+llyip+++wH+++sl +++svs++++ 
  Sb02g028370.1 355 DNIDFKEFPRAENLEFMDCILEEGDLLYIPPKWWHYVRSLSTSFSVSFWWRA 406
                    **************************************************95 PP
Protein Sequence
(Fasta)		MAAAAEAERV AALLREITGE GGFAFVASAE KAGAGDLRAA EAAREMAWEQ LHSGPWSEVG 60
TAWRDAYALA CLHVARLRTR TRGASGGGGG GDGDRSAALR ALDMGLIMGG NLLRADLEAA 120
LARISAEACD GDEGGAGVVD EEDQRWKEAL DRNRDIADAL KVLPANSLSC KKVERRSCIS 180
LEEFICNYFL RDSPVIISGA IDHWPAREKW KDIKYLKKIA GDRTVPVEVG KNYVCSDWKQ 240
ELVTFSQFLD RMWSTVCPSK LTYLAQHPLF EQIKELSEDI VVPEYCYAGG GELQSLNAWF 300
GPQGTVTPLH HDPHHNILAQ VLGRKYIRLY PAFISEDLYP HTETMLCNTS QVDLDNIDFK 360
EFPRAENLEF MDCILEEGDL LYIPPKWWHY VRSLSTSFSV SFWWRAAVQP SGGS 414
Nucleotide Sequence
(Fasta)		ATGGCCGCCG CCGCCGAGGC CGAGCGGGTG GCAGCGCTGC TGCGGGAGAT AACGGGGGAG 60
GGAGGGTTCG CTTTCGTCGC CTCGGCGGAG AAGGCGGGGG CGGGGGACCT GCGCGCGGCG 120
GAGGCGGCGC GGGAGATGGC GTGGGAGCAG CTCCACTCGG GCCCCTGGAG CGAGGTCGGC 180
ACCGCCTGGA GGGACGCCTA CGCGCTCGCC TGCCTCCACG TCGCGCGCCT CCGCACCCGC 240
ACCCGCGGGG CCAGCGGCGG GGGCGGGGGC GGGGACGGCG ACCGCTCCGC CGCGCTCCGG 300
GCGCTCGACA TGGGCCTCAT CATGGGGGGC AACCTACTGC GCGCCGACCT CGAGGCGGCC 360
CTGGCGCGCA TCTCCGCGGA AGCGTGCGAC GGAGACGAAG GTGGCGCGGG GGTCGTGGAT 420
GAGGAGGACC AGAGGTGGAA GGAGGCGCTC GACAGGAACC GAGACATCGC TGATGCACTC 480
AAAGTTCTTC CAGCAAACTC TTTATCCTGT AAGAAAGTCG AGAGGCGATC TTGCATCTCC 540
TTGGAGGAGT TTATATGTAA TTACTTTTTA CGCGACTCCC CTGTCATAAT TAGTGGCGCC 600
ATCGATCATT GGCCTGCAAG GGAAAAATGG AAGGACATTA AATACCTCAA GAAGATCGCT 660
GGAGATCGTA CTGTTCCTGT TGAAGTTGGA AAAAACTATG TGTGTAGTGA CTGGAAGCAG 720
GAGCTTGTCA CATTTTCTCA GTTCCTGGAT AGAATGTGGT CAACTGTCTG CCCATCAAAG 780
TTGACATATC TAGCTCAGCA TCCATTGTTT GAGCAGATAA AAGAGCTCAG TGAAGACATA 840
GTTGTTCCCG AATACTGTTA TGCTGGCGGA GGTGAACTCC AATCACTTAA TGCTTGGTTT 900
GGTCCACAGG GGACAGTGAC ACCATTGCAT CATGACCCAC ATCACAACAT CTTAGCTCAG 960
GTCTTGGGCA GGAAGTATAT TAGACTCTAT CCTGCTTTTA TATCTGAGGA CTTGTATCCA 1020
CACACAGAGA CTATGCTATG CAATACCAGT CAGGTAGATC TTGACAACAT TGATTTCAAG 1080
GAGTTTCCAA GGGCTGAAAA CCTGGAATTC ATGGACTGTA TATTGGAGGA AGGTGACCTG 1140
CTTTACATCC CTCCAAAATG GTGGCACTAC GTCAGATCTC TCTCCACCAG TTTCTCGGTT 1200
AGCTTTTGGT GGCGTGCAGC AGTTCAGCCC TCAGGCGGCT CATAGCTTCA ATTCTTATAT 1260
ATCTCCCATA TTATCAGAAT CAGTTTGCAG ACAACCAAAG TAACCTGACA GGACCCTTCG 1320
TTTCAGGTGA CGTCCGCTTT TCAATGGATG TCATCACCGA TGGCCATTGT TAGTTTTACT 1380
TTTACCACAG TGATTAAAAT ATTGAAATTG CCTACATGCC GTTTGTAACG ATGCGTTGTT 1440
CGACCATCAT GCTATCATCT GATTCTTCAA AGTTGAGAGG TTGGAGCCTT GGAGGGTGTC 1500
GTCCTCACTG CCACAATGTC ATATTAAAAC TGTAAAGGTA GACGTACTGT TGTGGCCACG 1560
GGCTACCAAC CACATACCGT TT 1583
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0040 GRMZM2G052908_P01 Zea mays 88 6e-179 624
WERAM-Sei-0115 Si029989m Setaria italica 83 1e-164 576
WERAM-Ors-0093 OS09T0489200-00 Oryza sativa 81 4e-164 575
WERAM-Lep-0101 LPERR09G10850.1 Leersia perrieri 80 9e-164 573
WERAM-Orgl-0101 OGLUM09G15350.1 Oryza glumaepatula 81 4e-163 571
WERAM-Ori-0103 BGIOSGA029547-PA Oryza indica 77 2e-159 559
WERAM-Brd-0110 BRADI4G33727.1 Brachypodium distachyon 79 7e-151 530
WERAM-Mua-0142 GSMUA_Achr9P20180_001 Musa acuminata 69 1e-144 510
WERAM-Orr-0098 ORUFI08G22350.2 Oryza rufipogon 68 2e-127 452
WERAM-Tra-0293 Traes_7AS_08AEBE00A.2 Triticum aestivum 81 1e-126 450
WERAM-Tru-0087 TRIUR3_31518-P1 Triticum urartu 81 2e-126 449
WERAM-Viv-0032 VIT_06s0004g01630.t01 Vitis vinifera 62 1e-123 440
WERAM-Orbr-0102 OB08G26850.1 Oryza brachyantha 76 1e-120 430
WERAM-Arl-0063 fgenesh2_kg.3__ 2308__ AT3G20810.2 Arabidopsis lyrata 57 1e-119 427
WERAM-Art-0076 AT3G20810.2 Arabidopsis thaliana 58 1e-119 427
WERAM-Prp-0114 EMJ09022 Prunus persica 60 1e-118 424
WERAM-Brr-0177 Bra035742.1-P Brassica rapa 57 2e-117 419
WERAM-Met-0103 KEH30262 Medicago truncatula 58 2e-117 419
WERAM-Bro-0097 Bo5g106210.1 Brassica oleracea 57 2e-117 419
WERAM-Thc-0109 EOY32544 Theobroma cacao 60 5e-117 418
WERAM-Pot-0003 POPTR_0001s05390.1 Populus trichocarpa 59 5e-114 408
WERAM-Orni-0094 ONIVA08G22510.3 Oryza nivara 63 9e-114 407
WERAM-Glm-0128 GLYMA11G13911.1 Glycine max 58 7e-113 404
WERAM-Sot-0067 PGSC0003DMT400055008 Solanum tuberosum 54 1e-112 404
WERAM-Php-0008 PP1S105_124V6.1 Physcomitrella patens 48 2e-100 363
WERAM-Hov-0087 MLOC_65982.1 Hordeum vulgare 83 2e-98 356
WERAM-Sem-0027 EFJ27560 Selaginella moellendorffii 48 2e-91 333
WERAM-Otg-0122 ENSOGAP00000010606.2 Otolemur garnettii 41 6e-71 265
WERAM-Tag-0119 ENSTGUP00000009777.1 Taeniopygia guttata 42 7e-71 265
WERAM-Myl-0091 ENSMLUP00000007518.2 Myotis lucifugus 44 9e-71 265
WERAM-Loa-0169 ENSLAFP00000015542.3 Loxodonta africana 43 2e-70 263
WERAM-Eqc-0005 ENSECAP00000000474.1 Equus caballus 42 2e-70 263
WERAM-Prc-0093 ENSPCAP00000008339.1 Procavia capensis 43 2e-70 263
WERAM-Gaga-0066 ENSGALP00000010168.4 Gallus gallus 41 3e-70 263
WERAM-Mup-0147 ENSMPUP00000012892.1 Mustela putorius furo 42 5e-70 262
WERAM-Cap-0027 ENSCPOP00000002073.2 Cavia porcellus 43 5e-70 262
WERAM-Mum-0112 ENSMUSP00000033010.2 Mus musculus 42 1e-69 261
WERAM-Ran-0101 ENSRNOP00000020388.4 Rattus norvegicus 41 1e-69 261
WERAM-Ova-0201 ENSOARP00000020136.1 Ovis aries 43 1e-69 260
WERAM-Lac-0048 ENSLACP00000007034.1 Latimeria chalumnae 42 1e-69 260
WERAM-Tut-0101 ENSTTRP00000008521.1 Tursiops truncatus 43 2e-69 259
WERAM-Ptv-0038 ENSPVAP00000004151.1 Pteropus vampyrus 41 3e-69 259
WERAM-Ten-0217 ENSTNIP00000021769.1 Tetraodon nigroviridis 42 6e-69 258
WERAM-Bot-0170 ENSBTAP00000026023.5 Bos taurus 43 6e-69 258
WERAM-Fec-0011 ENSFCAP00000000891.3 Felis catus 43 7e-69 258
WERAM-Dan-0154 ENSDNOP00000024517.1 Dasypus novemcinctus 43 8e-69 258
WERAM-Aim-0052 ENSAMEP00000004259.1 Ailuropoda melanoleuca 40 9e-69 258
WERAM-Sah-0112 ENSSHAP00000012011.1 Sarcophilus harrisii 41 1e-68 258
WERAM-Caf-0187 ENSCAFP00000025742.3 Canis familiaris 43 2e-68 256
WERAM-Tar-0148 ENSTRUP00000031961.1 Takifugu rubripes 43 3e-68 256
WERAM-Mod-0137 ENSMODP00000019296.2 Monodelphis domestica 41 3e-68 256
WERAM-Pof-0141 ENSPFOP00000011752.1 Poecilia formosa 43 4e-68 256
WERAM-Orn-0019 ENSONIP00000001749.1 Oreochromis niloticus 41 2e-67 253
WERAM-Nol-0122 ENSNLEP00000014249.2 Nomascus leucogenys 41 2e-67 253
WERAM-Hos-0166 ENSP00000286096.4 Homo sapiens 41 2e-67 253
WERAM-Dio-0095 ENSDORP00000009624.1 Dipodomys ordii 41 3e-67 253
WERAM-Gog-0074 ENSGGOP00000006358.2 Gorilla gorilla 41 4e-67 253
WERAM-Poa-0063 ENSPPYP00000008151.1 Pongo abelii 41 7e-67 251
WERAM-Pat-0060 ENSPTRP00000013519.3 Pan troglodytes 41 7e-67 251
WERAM-Xim-0107 ENSXMAP00000009477.1 Xiphophorus maculatus 42 9e-67 251
WERAM-Pes-0097 ENSPSIP00000011968.1 Pelodiscus sinensis 40 1e-66 251
WERAM-Chs-0075 ENSCSAP00000002744.1 Chlorocebus sabaeus 40 1e-66 250
WERAM-Paa-0062 ENSPANP00000012432.1 Papio anubis 41 2e-66 250
WERAM-Gam-0047 ENSGMOP00000004939.1 Gadus morhua 41 4e-66 249
WERAM-Sus-0055 ENSSSCP00000008347.2 Sus scrofa 42 4e-66 249
WERAM-Anc-0031 ENSACAP00000003528.2 Anolis carolinensis 52 7e-66 248
WERAM-Tub-0083 ENSTBEP00000009713.1 Tupaia belangeri 42 8e-66 248
WERAM-Mam-0145 ENSMMUP00000020806.2 Macaca mulatta 41 2e-65 247
WERAM-Ict-0169 ENSSTOP00000022768.1 Ictidomys tridecemlineatus 40 4e-65 246
WERAM-Xet-0135 ENSXETP00000047024.2 Xenopus tropicalis 49 4e-65 246
WERAM-Gaa-0145 ENSGACP00000018511.1 Gasterosteus aculeatus 41 4e-65 246
WERAM-Dar-0218 ENSDARP00000133489.1 Danio rerio 40 5e-65 245
WERAM-Orla-0050 ENSORLP00000006206.1 Oryzias latipes 40 3e-64 243
WERAM-Tas-0011 ENSTSYP00000001358.1 Tarsius syrichta 50 3e-64 243
WERAM-Fia-0169 ENSFALP00000014680.1 Ficedula albicollis 50 4e-64 242
WERAM-Ere-0039 ENSEEUP00000002911.1 Erinaceus europaeus 40 4e-64 242
WERAM-Leo-0023 ENSLOCP00000004737.1 Lepisosteus oculatus 38 6e-64 242
WERAM-Anp-0138 ENSAPLP00000014931.1 Anas platyrhynchos 51 4e-63 239
WERAM-Chh-0005 ENSCHOP00000000442.1 Choloepus hoffmanni 38 6e-62 235
WERAM-Mim-0094 ENSMICP00000008672.1 Microcebus murinus 39 7e-57 218
WERAM-Caj-0217 ENSCJAP00000038116.2 Callithrix jacchus 36 1e-52 204
WERAM-Mae-0065 ENSMEUP00000005887.1 Macropus eugenii 36 3e-51 200
Created Date 25-Jun-2016