WERAM Information

Tag Content
WERAM ID WERAM-Brr-0177
Ensembl Protein ID Bra035742.1-P
Gene Name JMJD5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra035742 Bra035742.1 Bra035742.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JmjC_only 2.90e-51 174 261 413
Organism Brassica rapa
Domain Profile
  HDM JmjC_only
  JmjC_only.txt   2 ledylvpktfsdqlwqlkeelsepfyclvgsn.......wfltGpassgfplHvddieaflvqveGrkrwrlyepsepaellk.....lasdeqvk 85 
                    +++yl++++++dq+++l++++++p+yc+vg +       wf  Gpa++++plH+d+++++l+qv G+k++rly++s ++el++     l++++qv+
  Bra035742.1-P 261 EPTYLAQHPLFDQINELRDDICIPDYCFVGGGdlqslnaWF--GPAGTVTPLHHDPHHNILAQVVGKKYIRLYPSSLQDELYPysetmLCNSSQVD 354
                    589**************************************..***************************************************** PP
  JmjC_only.txt  86 qedllltkftliaprplletvlepgellyiprgtwHqalsldvtlsvsqnfssetflen 144
                     +++++++f+++ + ++++++le+ge+lyip+++wH+++sl++++svs+++s+e+++++
  Bra035742.1-P 355 LDNIDKNEFPKVVELEFMDCILEEGEMLYIPPKWWHYVRSLTMSFSVSFWWSNEAESSD 413
                    ****************************************************9998875 PP
Protein Sequence
(Fasta)		MSGAPTAASS GNHSLHLPTP TLDAESQSLL QSISAQGGYA YARMAALAVA GDQSAAEAAR 60
DMAWEQLHSG PWHSVLPVWR DAYSMACLHV AKFHFAAGEF GEALGALDMG LIMGGTLLRK 120
DLHDSVLLVS SEARKKAKSL GDFKGEKLVP EVPVDVNEVL KILPLRSLTS GRVDKRSDLS 180
MEGFLRDYFQ TGTPVVITNC MAHWPARTKW NHLDYLTSVA GNRTVPVEVG KNYLCSDWKQ 240
ELVTFSKFLE RMRTNRSTSV EPTYLAQHPL FDQINELRDD ICIPDYCFVG GGDLQSLNAW 300
FGPAGTVTPL HHDPHHNILA QVVGKKYIRL YPSSLQDELY PYSETMLCNS SQVDLDNIDK 360
NEFPKVVELE FMDCILEEGE MLYIPPKWWH YVRSLTMSFS VSFWWSNEAE SSDS 414
Nucleotide Sequence
(Fasta)		ATGTCAGGAG CTCCCACCGC CGCTTCCTCC GGCAACCACA GCCTCCATCT CCCGACTCCA 60
ACCCTCGACG CGGAGTCGCA GTCCCTGCTG CAGTCGATCT CCGCTCAAGG CGGTTACGCC 120
TATGCTCGCA TGGCGGCGCT AGCAGTCGCC GGCGACCAAA GCGCGGCGGA GGCGGCGCGT 180
GATATGGCCT GGGAGCAGCT TCACTCCGGT CCCTGGCACT CTGTTCTCCC CGTGTGGCGC 240
GACGCTTACT CGATGGCGTG TCTCCACGTG GCCAAGTTCC ATTTCGCCGC CGGCGAGTTT 300
GGGGAAGCCC TCGGCGCGCT CGATATGGGT CTCATCATGG GAGGGACGCT TCTCCGCAAG 360
GACCTCCACG ACTCTGTGCT CTTGGTCTCC TCTGAAGCTC GTAAGAAGGC TAAGAGCCTC 420
GGAGATTTCA AGGGTGAGAA ACTTGTCCCT GAAGTTCCCG TCGACGTCAA TGAGGTGCTA 480
AAGATTCTAC CTTTGAGGTC ATTGACTAGT GGAAGAGTAG ACAAGAGGTC TGACTTATCT 540
ATGGAGGGGT TTCTGCGTGA TTATTTTCAG ACAGGTACAC CTGTTGTTAT AACCAATTGT 600
ATGGCTCATT GGCCTGCTAG GACCAAGTGG AACCACTTGG ACTATCTCAC TTCTGTTGCT 660
GGTAACCGTA CCGTTCCCGT CGAGGTGGGG AAAAACTATT TGTGTTCAGA TTGGAAGCAA 720
GAGCTTGTGA CGTTTTCCAA GTTCCTTGAA CGGATGAGGA CCAATAGATC CACCTCCGTG 780
GAGCCTACTT ATCTTGCTCA GCATCCGTTG TTTGATCAGA TAAATGAACT GAGAGATGAT 840
ATATGTATTC CTGATTACTG TTTTGTCGGT GGAGGGGATC TCCAATCTCT TAATGCGTGG 900
TTTGGTCCGG CTGGGACAGT TACTCCCTTA CACCATGATC CACATCATAA TATACTTGCT 960
CAGGTTGTTG GCAAGAAGTA TATAAGGCTT TACCCATCCT CATTGCAAGA CGAACTTTAC 1020
CCTTATTCTG AGACAATGCT TTGCAACTCT AGCCAGGTTG ATCTTGACAA CATCGACAAG 1080
AACGAGTTTC CAAAGGTGGT GGAGCTAGAG TTTATGGATT GTATCCTAGA GGAAGGCGAA 1140
ATGCTGTACA TCCCTCCCAA ATGGTGGCAC TATGTCAGGT CTTTAACAAT GAGTTTCTCG 1200
GTTAGCTTCT GGTGGAGCAA TGAAGCAGAG TCCTCTGATT CTTAG 1246
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0097 Bo5g106210.1 Brassica oleracea 99 0.0 800
WERAM-Arl-0063 fgenesh2_kg.3__ 2308__ AT3G20810.2 Arabidopsis lyrata 87 0.0 720
WERAM-Art-0076 AT3G20810.2 Arabidopsis thaliana 87 0.0 719
WERAM-Viv-0032 VIT_06s0004g01630.t01 Vitis vinifera 73 5e-162 568
WERAM-Pot-0003 POPTR_0001s05390.1 Populus trichocarpa 71 1e-160 563
WERAM-Met-0103 KEH30262 Medicago truncatula 71 3e-160 561
WERAM-Prp-0114 EMJ09022 Prunus persica 71 9e-157 550
WERAM-Thc-0109 EOY32544 Theobroma cacao 69 2e-156 549
WERAM-Sot-0067 PGSC0003DMT400055008 Solanum tuberosum 67 2e-152 536
WERAM-Glm-0128 GLYMA11G13911.1 Glycine max 67 5e-150 528
WERAM-Mua-0142 GSMUA_Achr9P20180_001 Musa acuminata 61 5e-134 474
WERAM-Sob-0030 Sb02g028370.1 Sorghum bicolor 58 5e-126 448
WERAM-Zem-0040 GRMZM2G052908_P01 Zea mays 58 1e-125 446
WERAM-Lep-0101 LPERR09G10850.1 Leersia perrieri 58 2e-125 446
WERAM-Ors-0093 OS09T0489200-00 Oryza sativa 57 5e-125 445
WERAM-Orgl-0101 OGLUM09G15350.1 Oryza glumaepatula 57 5e-125 444
WERAM-Sei-0115 Si029989m Setaria italica 58 7e-125 444
WERAM-Brd-0110 BRADI4G33727.1 Brachypodium distachyon 60 1e-120 430
WERAM-Ori-0103 BGIOSGA029547-PA Oryza indica 54 2e-120 429
WERAM-Php-0008 PP1S105_124V6.1 Physcomitrella patens 54 6e-109 391
WERAM-Orr-0098 ORUFI08G22350.2 Oryza rufipogon 54 1e-105 380
WERAM-Sem-0129 EFJ37386 Selaginella moellendorffii 50 6e-104 375
WERAM-Tru-0087 TRIUR3_31518-P1 Triticum urartu 64 3e-102 369
WERAM-Tra-0293 Traes_7AS_08AEBE00A.2 Triticum aestivum 65 5e-102 368
WERAM-Orbr-0102 OB08G26850.1 Oryza brachyantha 63 2e-98 356
WERAM-Orni-0094 ONIVA08G22510.3 Oryza nivara 50 4e-91 332
WERAM-Hov-0087 MLOC_65982.1 Hordeum vulgare 71 5e-81 298
WERAM-Cap-0027 ENSCPOP00000002073.2 Cavia porcellus 44 4e-77 285
WERAM-Aim-0052 ENSAMEP00000004259.1 Ailuropoda melanoleuca 42 2e-75 280
WERAM-Otg-0122 ENSOGAP00000010606.2 Otolemur garnettii 43 1e-74 278
WERAM-Mup-0147 ENSMPUP00000012892.1 Mustela putorius furo 42 2e-74 277
WERAM-Sah-0112 ENSSHAP00000012011.1 Sarcophilus harrisii 41 2e-74 277
WERAM-Mum-0112 ENSMUSP00000033010.2 Mus musculus 42 3e-74 276
WERAM-Tut-0101 ENSTTRP00000008521.1 Tursiops truncatus 43 2e-73 274
WERAM-Ran-0101 ENSRNOP00000020388.4 Rattus norvegicus 41 3e-73 273
WERAM-Tar-0148 ENSTRUP00000031961.1 Takifugu rubripes 42 1e-72 271
WERAM-Gaa-0145 ENSGACP00000018511.1 Gasterosteus aculeatus 43 3e-72 270
WERAM-Orn-0019 ENSONIP00000001749.1 Oreochromis niloticus 42 3e-72 270
WERAM-Mod-0137 ENSMODP00000019296.2 Monodelphis domestica 40 3e-72 269
WERAM-Eqc-0005 ENSECAP00000000474.1 Equus caballus 41 3e-72 269
WERAM-Nol-0122 ENSNLEP00000014249.2 Nomascus leucogenys 40 4e-72 269
WERAM-Caf-0187 ENSCAFP00000025742.3 Canis familiaris 42 5e-72 269
WERAM-Prc-0093 ENSPCAP00000008339.1 Procavia capensis 41 5e-72 268
WERAM-Xet-0135 ENSXETP00000047024.2 Xenopus tropicalis 39 6e-72 268
WERAM-Loa-0169 ENSLAFP00000015542.3 Loxodonta africana 41 6e-72 268
WERAM-Gog-0074 ENSGGOP00000006358.2 Gorilla gorilla 40 8e-72 268
WERAM-Ova-0201 ENSOARP00000020136.1 Ovis aries 42 1e-71 268
WERAM-Hos-0166 ENSP00000286096.4 Homo sapiens 40 2e-71 266
WERAM-Gaga-0066 ENSGALP00000010168.4 Gallus gallus 42 2e-71 266
WERAM-Poa-0063 ENSPPYP00000008151.1 Pongo abelii 41 2e-71 266
WERAM-Sus-0055 ENSSSCP00000008347.2 Sus scrofa 43 3e-71 266
WERAM-Fec-0011 ENSFCAP00000000891.3 Felis catus 42 3e-71 266
WERAM-Paa-0062 ENSPANP00000012432.1 Papio anubis 40 3e-71 266
WERAM-Pat-0060 ENSPTRP00000013519.3 Pan troglodytes 40 5e-71 265
WERAM-Bot-0170 ENSBTAP00000026023.5 Bos taurus 42 5e-71 265
WERAM-Pof-0141 ENSPFOP00000011752.1 Poecilia formosa 41 6e-71 265
WERAM-Myl-0091 ENSMLUP00000007518.2 Myotis lucifugus 41 7e-71 265
WERAM-Dio-0095 ENSDORP00000009624.1 Dipodomys ordii 43 7e-71 265
WERAM-Ict-0169 ENSSTOP00000022768.1 Ictidomys tridecemlineatus 42 8e-71 265
WERAM-Ptv-0038 ENSPVAP00000004151.1 Pteropus vampyrus 42 1e-70 264
WERAM-Tag-0119 ENSTGUP00000009777.1 Taeniopygia guttata 42 1e-70 264
WERAM-Lac-0048 ENSLACP00000007034.1 Latimeria chalumnae 39 1e-70 264
WERAM-Ten-0217 ENSTNIP00000021769.1 Tetraodon nigroviridis 41 2e-70 263
WERAM-Mam-0145 ENSMMUP00000020806.2 Macaca mulatta 40 2e-70 263
WERAM-Gam-0047 ENSGMOP00000004939.1 Gadus morhua 40 3e-70 263
WERAM-Pes-0097 ENSPSIP00000011968.1 Pelodiscus sinensis 41 4e-70 263
WERAM-Xim-0107 ENSXMAP00000009477.1 Xiphophorus maculatus 41 1e-69 261
WERAM-Chs-0075 ENSCSAP00000002744.1 Chlorocebus sabaeus 40 1e-69 261
WERAM-Leo-0023 ENSLOCP00000004737.1 Lepisosteus oculatus 40 1e-68 257
WERAM-Dan-0154 ENSDNOP00000024517.1 Dasypus novemcinctus 40 2e-68 257
WERAM-Ere-0039 ENSEEUP00000002911.1 Erinaceus europaeus 42 7e-68 254
WERAM-Dar-0218 ENSDARP00000133489.1 Danio rerio 40 1e-67 254
WERAM-Orla-0050 ENSORLP00000006206.1 Oryzias latipes 41 1e-67 254
WERAM-Tub-0083 ENSTBEP00000009713.1 Tupaia belangeri 44 3e-67 253
WERAM-Tas-0011 ENSTSYP00000001358.1 Tarsius syrichta 51 4e-65 246
WERAM-Fia-0169 ENSFALP00000014680.1 Ficedula albicollis 51 2e-62 236
WERAM-Chh-0005 ENSCHOP00000000442.1 Choloepus hoffmanni 38 1e-61 234
WERAM-Anc-0031 ENSACAP00000003528.2 Anolis carolinensis 49 9e-60 228
WERAM-Anp-0138 ENSAPLP00000014931.1 Anas platyrhynchos 50 7e-59 225
WERAM-Caj-0217 ENSCJAP00000038116.2 Callithrix jacchus 37 2e-57 220
WERAM-Mae-0065 ENSMEUP00000005887.1 Macropus eugenii 36 2e-56 216
WERAM-Mim-0094 ENSMICP00000008672.1 Microcebus murinus 36 5e-56 216
WERAM-Asm-0055 ENSAMXP00000006811.1 Astyanax mexicanus 24 1e-07 55.1
Created Date 25-Jun-2016