WERAM Information

Tag Content
WERAM ID WERAM-Zem-0085
Ensembl Protein ID GRMZM2G153087_P01
Gene Name ALF4 TIDP3057
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G153087 GRMZM2G153087_T01 GRMZM2G153087_P01
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.30e-11 44.1 204 250
Organism Zea mays
Domain Profile
  Me_Reader PHD
            PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                        +C +Cg  +++  ++++Cd C++wfH+kCvk++  ++   k++ CpsC+
  GRMZM2G153087_P01 204 LCGACGLGYDD--FWICCDLCETWFHGKCVKITPAKADHIKQYKCPSCT 250
                        7****766666..7*******************555443379******8 PP
Protein Sequence
(Fasta)		MDGGAGFPGT QPVSRSPEDV FRDYRARQAG LIRALTTDVE KFYVMCDPEK ENLCLYGLPN 60
ETWEINLPAE EVPPELPEPA LGINFARDGM DEKDWLSLVA VHSDSWLMSV AFYFGARFGF 120
DKESRKRLFT MINNLPSIYE VVTGTAKKEP KEKTPKSNIK TNKSGSKPSR HAEPNSRVPK 180
MPPPKDEESE EEEGEPQEDQ ESALCGACGL GYDDFWICCD LCETWFHGKC VKITPAKADH 240
IKQYKCPSCT GSKRAKV 257
Nucleotide Sequence
(Fasta)		AGGGTCAATG GTGTGCCAGA TAGGCCCGCG CAAACTAACT ATTGGACGCA TTGGAAGGCC 60
CGCGACTGCG GCTGCGCGGC CTGCGCCTGC GCCTGCGCAG GCGCGCGTGT GAACAAACGT 120
AGGAGGACCT ATCTCTTTTC GTTCTCCGAG AGAAGTCTTC TCTGTCACAG CGCCGACGCT 180
TCTCAATTCC TTCCAATCGG CACCTCGCCG TCCTCGTGTG CAATCCCCAG CTCTCCTCGC 240
CCCTCCCTCC CAAACTCCAG CGGCCCCCCT GACCAAGCTC CGGGGACGGA TGGACGGAGG 300
AGCCGGCTTT CCGGGCACGC AGCCGGTCTC CCGCTCGCCG GAGGACGTCT TCCGGGACTA 360
CCGCGCGCGC CAGGCCGGCC TGATCAGGGC GCTCACCACC GATGTGGAGA AGTTCTACGT 420
GATGTGCGAC CCAGAGAAGG AGAACTTATG TTTATATGGA CTTCCTAATG AGACATGGGA 480
AATAAACTTG CCTGCTGAAG AGGTCCCTCC TGAACTGCCA GAGCCAGCTC TTGGAATTAA 540
TTTTGCTCGT GATGGGATGG ATGAAAAAGA TTGGCTATCA CTTGTTGCAG TGCATAGTGA 600
TTCTTGGCTA ATGTCTGTTG CATTTTATTT TGGAGCAAGG TTTGGATTCG ATAAAGAATC 660
CAGGAAACGT CTCTTCACCA TGATCAATAA CCTTCCCAGC ATATATGAGG TTGTCACAGG 720
AACAGCCAAG AAAGAGCCCA AAGAAAAAAC TCCTAAAAGC AACATTAAGA CTAACAAATC 780
TGGCTCAAAG CCCTCGCGCC ATGCGGAACC CAACTCAAGG GTCCCAAAGA TGCCACCTCC 840
AAAGGACGAG GAGAGTGAAG AGGAGGAAGG GGAACCACAG GAAGACCAGG AGAGTGCGCT 900
GTGTGGCGCA TGTGGCCTAG GTTATGACGA CTTCTGGATC TGCTGCGACC TATGCGAGAC 960
ATGGTTCCAC GGCAAGTGTG TTAAGATCAC CCCAGCTAAA GCGGACCACA TCAAGCAGTA 1020
TAAGTGCCCC TCCTGCACGG GAAGCAAGAG GGCCAAGGTT TGATCCACGA TCCAAGGAGC 1080
CTTTGACGAG AGCTGTAAGC TGACTCTTCG TGCTAGGGCA GCTAATAGAT TCGAATGCTT 1140
GTTTTGATAC AAATTATGAG TACTGACGAA CCGTAAACTG ATGTAGTTTG TGTGGCCCTC 1200
AAAGCATCTA TGTCCTGACT TGTGTGGTTT AGGTTTCCTT TGGCACAGTT TCTAAGAGCT 1260
GATTGTCTAT GAATCTAATA TGAGTTTTGT CAATTAGAGA GAAGTTGCTA TGCTGAATTT 1320
ATGAGCTGAT TTTATAAAGT GATGATATAA AATAAACTAA AAGACCAGAG CCG 1374
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0115 Sb08g006530.1 Sorghum bicolor 93 7e-109 390
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 76 4e-89 324
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 75 9e-89 323
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 75 9e-89 323
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 75 9e-89 323
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 75 9e-89 323
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 75 9e-89 323
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 75 9e-89 323
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 75 9e-89 323
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 75 9e-89 323
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 76 2e-87 319
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 75 5e-87 318
WERAM-Sei-0084 Si022496m Setaria italica 80 8e-87 317
WERAM-Mua-0096 GSMUA_Achr6P28820_001 Musa acuminata 71 2e-85 312
WERAM-Brd-0116 BRADI4G40230.1 Brachypodium distachyon 73 6e-85 310
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 67 3e-80 295
WERAM-Prp-0081 EMJ24886 Prunus persica 69 2e-79 292
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 66 5e-79 291
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 77 8e-79 290
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 68 5e-78 288
WERAM-Thc-0075 EOY26404 Theobroma cacao 67 3e-77 285
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 67 3e-77 285
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 66 6e-77 284
WERAM-Met-0117 KEH32736 Medicago truncatula 67 9e-77 283
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 65 2e-76 283
WERAM-Brr-0085 Bra016698.1-P Brassica rapa 62 2e-76 282
WERAM-Arl-0043 fgenesh2_kg.1__ 1579__ AT1G14510.1 Arabidopsis lyrata 65 2e-76 282
WERAM-Amt-0088 ERM99796 Amborella trichopoda 65 3e-75 278
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 63 8e-75 277
WERAM-Bro-0146 Bo8g066080.1 Brassica oleracea 62 1e-74 276
WERAM-Aet-0106 EMT19247 Aegilops tauschii 64 4e-73 271
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 67 1e-71 266
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 60 4e-65 244
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 57 3e-64 242
Created Date 25-Jun-2016