WERAM Information

Tag Content
WERAM ID WERAM-Glm-0140
Ensembl Protein ID GLYMA12G05890.1
Gene Name GLYMA_12G055000
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA12G05890 GLYMA12G05890.1 GLYMA12G05890.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JmjC_only 1.40e-47 162.8 261 410
Organism Glycine max
Domain Profile
  HDM JmjC_only
    JmjC_only.txt   3 edylvpktfsdqlwqlkeelsepfyclvgsn.......wfltGpassgfplHvddieaflvqveGrkrwrlyepsepaellk.....lasdeqv 84 
                      ++yl++++++dq+++l++++ +p+yc+ g +       wf  Gpa++++plH+d+++++l+qv G+k++rly++s ++el +     l++++qv
  GLYMA12G05890.1 261 PTYLAQHPLFDQINELRKDIFIPDYCFTGGGelrslnaWF--GPAGTVTPLHHDPHHNILAQVVGKKYIRLYSSSLSEELSPhsgtmLHNSSQV 352
                      68**************************************..******************************9999988888************ PP
    JmjC_only.txt  85 kqedllltkftliaprplletvlepgellyiprgtwHqalsldvtlsvsqnfssetfl 142
                      + +d++++kf+++++ ++++++le+ge+lyip+++wH+++sl++++svs+++s ++++
  GLYMA12G05890.1 353 DLDDMDEKKFPKVQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSFSVSFWWSEGESS 410
                      *****************************************************76665 PP
Protein Sequence
(Fasta)		MSTTTVSGGD PPSRGFDTPT LDREAAALLH AISEHGGYAY VSMAVLASGG DIRAAEAARE 60
MAWEQLHSGP WHSVLPVWRD AYSMACLHVA RHHYGNGEFL DALRVLDLGI IMGGTLLRKD 120
LDSAIEKVSE QTRRSVRVSD LGNSEHRLVD REFDMAEVLQ LLPVKSLSTK LVVKKSALSL 180
EKFLKDHYLS GCPVIISDCM SHWPAKMKWN DEDYLLRVAG DRTVPVEVGK NYLCTEWKQE 240
LITFSEFLQR IKSDSCSPGG PTYLAQHPLF DQINELRKDI FIPDYCFTGG GELRSLNAWF 300
GPAGTVTPLH HDPHHNILAQ VVGKKYIRLY SSSLSEELSP HSGTMLHNSS QVDLDDMDEK 360
KFPKVQDLEF VDCILEEGEM LYIPPKWWHY VRSLTTSFSV SFWWSEGESS DAS 413
Nucleotide Sequence
(Fasta)		ATGTCGACCA CAACTGTATC CGGCGGCGAC CCTCCTTCTC GCGGTTTTGA TACGCCGACG 60
CTGGACCGGG AGGCGGCGGC GCTGCTCCAC GCGATCTCCG AGCATGGCGG GTACGCGTAC 120
GTGAGCATGG CGGTGCTGGC TTCCGGCGGC GACATTCGCG CGGCGGAGGC GGCTCGGGAG 180
ATGGCGTGGG AGCAGCTGCA CTCGGGTCCG TGGCACTCGG TGCTGCCGGT GTGGCGCGAC 240
GCCTACTCCA TGGCGTGCCT CCACGTGGCG CGCCACCACT ACGGCAACGG TGAGTTCTTG 300
GACGCACTTA GGGTTTTGGA TTTGGGAATC ATCATGGGAG GCACGCTCCT CCGCAAGGAT 360
TTGGACTCCG CCATCGAGAA AGTGTCGGAA CAAACACGGA GGAGCGTTAG GGTTTCTGAT 420
TTGGGGAACT CCGAACACCG ACTCGTCGAT CGCGAATTTG ATATGGCAGA GGTGCTCCAA 480
CTTTTACCTG TGAAGTCTCT TTCTACGAAA CTTGTGGTGA AGAAATCGGC GCTGTCCTTG 540
GAGAAATTCC TGAAGGATCA TTACCTGTCT GGCTGCCCGG TTATTATCAG TGATTGTATG 600
TCTCACTGGC CAGCCAAGAT GAAATGGAAT GACGAAGATT ACTTGCTGAG AGTTGCCGGA 660
GACCGTACAG TTCCAGTTGA GGTTGGGAAA AACTATTTAT GTACTGAGTG GAAGCAAGAG 720
CTAATTACTT TTTCAGAGTT TCTTCAGCGG ATAAAGTCTG ATAGCTGTTC TCCTGGTGGT 780
CCTACATATC TTGCTCAGCA TCCATTATTT GATCAGATAA ATGAGCTTCG GAAAGATATC 840
TTTATTCCTG ACTATTGTTT TACTGGTGGA GGGGAGCTAC GATCTCTCAA TGCTTGGTTT 900
GGTCCAGCAG GAACAGTAAC ACCGTTACAC CATGATCCAC ATCATAACAT ACTAGCTCAG 960
GTTGTTGGAA AGAAATACAT TAGGCTATAC TCTTCGTCTT TATCTGAGGA ACTTTCCCCC 1020
CACTCTGGTA CCATGCTCCA CAACTCCAGC CAGGTTGATT TAGATGATAT GGATGAAAAG 1080
AAGTTTCCGA AGGTGCAAGA CTTGGAATTT GTAGACTGTA TTTTAGAGGA AGGCGAAATG 1140
TTATATATCC CGCCAAAATG GTGGCACTAT GTGCGGTCTT TGACTACCAG TTTTTCGGTT 1200
AGCTTTTGGT GGAGTGAGGG TGAAAGTTCG GATGCATCCT AA 1243
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Met-0103 KEH30262 Medicago truncatula 79 2e-175 612
WERAM-Pot-0003 POPTR_0001s05390.1 Populus trichocarpa 75 3e-158 555
WERAM-Thc-0109 EOY32544 Theobroma cacao 72 5e-156 548
WERAM-Sot-0067 PGSC0003DMT400055008 Solanum tuberosum 71 2e-153 539
WERAM-Viv-0032 VIT_06s0004g01630.t01 Vitis vinifera 73 2e-153 539
WERAM-Prp-0114 EMJ09022 Prunus persica 73 5e-150 528
WERAM-Brr-0177 Bra035742.1-P Brassica rapa 68 2e-147 519
WERAM-Bro-0097 Bo5g106210.1 Brassica oleracea 67 2e-146 516
WERAM-Art-0076 AT3G20810.2 Arabidopsis thaliana 66 2e-145 512
WERAM-Arl-0063 fgenesh2_kg.3__ 2308__ AT3G20810.2 Arabidopsis lyrata 65 5e-145 511
WERAM-Mua-0127 GSMUA_Achr8P25590_001 Musa acuminata 66 8e-137 484
WERAM-Lep-0101 LPERR09G10850.1 Leersia perrieri 62 5e-123 438
WERAM-Zem-0040 GRMZM2G052908_P01 Zea mays 61 6e-123 438
WERAM-Orgl-0101 OGLUM09G15350.1 Oryza glumaepatula 60 5e-120 428
WERAM-Ors-0093 OS09T0489200-00 Oryza sativa 60 9e-120 427
WERAM-Sei-0115 Si029989m Setaria italica 60 5e-119 425
WERAM-Sob-0030 Sb02g028370.1 Sorghum bicolor 59 5e-118 422
WERAM-Ori-0103 BGIOSGA029547-PA Oryza indica 58 3e-115 412
WERAM-Brd-0110 BRADI4G33727.1 Brachypodium distachyon 60 2e-109 393
WERAM-Php-0008 PP1S105_124V6.1 Physcomitrella patens 50 4e-101 365
WERAM-Orr-0098 ORUFI08G22350.2 Oryza rufipogon 56 2e-99 360
WERAM-Sem-0027 EFJ27560 Selaginella moellendorffii 49 4e-96 348
WERAM-Tru-0087 TRIUR3_31518-P1 Triticum urartu 69 1e-92 337
WERAM-Tra-0293 Traes_7AS_08AEBE00A.2 Triticum aestivum 69 2e-92 336
WERAM-Orni-0094 ONIVA08G22510.3 Oryza nivara 51 2e-91 333
WERAM-Orbr-0102 OB08G26850.1 Oryza brachyantha 64 1e-86 317
WERAM-Hov-0087 MLOC_65982.1 Hordeum vulgare 70 6e-77 285
WERAM-Tag-0119 ENSTGUP00000009777.1 Taeniopygia guttata 44 2e-71 266
WERAM-Sah-0112 ENSSHAP00000012011.1 Sarcophilus harrisii 42 4e-71 266
WERAM-Cap-0027 ENSCPOP00000002073.2 Cavia porcellus 42 6e-71 265
WERAM-Loa-0169 ENSLAFP00000015542.3 Loxodonta africana 43 4e-70 262
WERAM-Mup-0147 ENSMPUP00000012892.1 Mustela putorius furo 43 7e-70 261
WERAM-Mum-0112 ENSMUSP00000033010.2 Mus musculus 43 1e-69 261
WERAM-Otg-0122 ENSOGAP00000010606.2 Otolemur garnettii 45 1e-69 260
WERAM-Mod-0137 ENSMODP00000019296.2 Monodelphis domestica 43 2e-69 260
WERAM-Gaga-0066 ENSGALP00000010168.4 Gallus gallus 43 3e-69 259
WERAM-Prc-0093 ENSPCAP00000008339.1 Procavia capensis 45 3e-69 259
WERAM-Fec-0011 ENSFCAP00000000891.3 Felis catus 44 4e-69 259
WERAM-Ict-0169 ENSSTOP00000022768.1 Ictidomys tridecemlineatus 42 2e-68 257
WERAM-Gaa-0145 ENSGACP00000018511.1 Gasterosteus aculeatus 40 4e-68 256
WERAM-Eqc-0005 ENSECAP00000000474.1 Equus caballus 44 5e-68 255
WERAM-Nol-0122 ENSNLEP00000014249.2 Nomascus leucogenys 43 7e-68 255
WERAM-Ptv-0038 ENSPVAP00000004151.1 Pteropus vampyrus 43 7e-68 255
WERAM-Ran-0101 ENSRNOP00000020388.4 Rattus norvegicus 41 8e-68 254
WERAM-Xet-0135 ENSXETP00000047024.2 Xenopus tropicalis 41 2e-67 254
WERAM-Caf-0187 ENSCAFP00000025742.3 Canis familiaris 43 2e-67 254
WERAM-Pof-0141 ENSPFOP00000011752.1 Poecilia formosa 41 2e-67 253
WERAM-Gog-0074 ENSGGOP00000006358.2 Gorilla gorilla 42 3e-67 253
WERAM-Pes-0097 ENSPSIP00000011968.1 Pelodiscus sinensis 44 3e-67 253
WERAM-Xim-0107 ENSXMAP00000009477.1 Xiphophorus maculatus 38 3e-67 253
WERAM-Aim-0052 ENSAMEP00000004259.1 Ailuropoda melanoleuca 43 4e-67 253
WERAM-Poa-0063 ENSPPYP00000008151.1 Pongo abelii 42 4e-67 252
WERAM-Hos-0166 ENSP00000286096.4 Homo sapiens 43 4e-67 252
WERAM-Orn-0019 ENSONIP00000001749.1 Oreochromis niloticus 42 5e-67 252
WERAM-Tut-0101 ENSTTRP00000008521.1 Tursiops truncatus 43 7e-67 251
WERAM-Gam-0047 ENSGMOP00000004939.1 Gadus morhua 42 7e-67 251
WERAM-Pat-0060 ENSPTRP00000013519.3 Pan troglodytes 42 8e-67 251
WERAM-Tar-0148 ENSTRUP00000031961.1 Takifugu rubripes 41 9e-67 251
WERAM-Chs-0075 ENSCSAP00000002744.1 Chlorocebus sabaeus 42 1e-66 250
WERAM-Paa-0062 ENSPANP00000012432.1 Papio anubis 42 2e-66 250
WERAM-Myl-0091 ENSMLUP00000007518.2 Myotis lucifugus 42 3e-66 249
WERAM-Ten-0217 ENSTNIP00000021769.1 Tetraodon nigroviridis 37 4e-66 249
WERAM-Dan-0154 ENSDNOP00000024517.1 Dasypus novemcinctus 43 1e-65 247
WERAM-Bot-0170 ENSBTAP00000026023.5 Bos taurus 43 2e-65 247
WERAM-Mam-0145 ENSMMUP00000020806.2 Macaca mulatta 42 2e-65 247
WERAM-Sus-0055 ENSSSCP00000008347.2 Sus scrofa 42 2e-65 246
WERAM-Dio-0095 ENSDORP00000009624.1 Dipodomys ordii 42 5e-65 245
WERAM-Tub-0083 ENSTBEP00000009713.1 Tupaia belangeri 43 5e-65 245
WERAM-Ova-0201 ENSOARP00000020136.1 Ovis aries 42 5e-65 245
WERAM-Orla-0050 ENSORLP00000006206.1 Oryzias latipes 41 8e-65 244
WERAM-Lac-0048 ENSLACP00000007034.1 Latimeria chalumnae 42 8e-65 244
WERAM-Leo-0023 ENSLOCP00000004737.1 Lepisosteus oculatus 39 2e-64 243
WERAM-Dar-0218 ENSDARP00000133489.1 Danio rerio 40 1e-63 241
WERAM-Ere-0039 ENSEEUP00000002911.1 Erinaceus europaeus 40 4e-63 239
WERAM-Anc-0031 ENSACAP00000003528.2 Anolis carolinensis 41 1e-62 238
WERAM-Tas-0011 ENSTSYP00000001358.1 Tarsius syrichta 53 1e-62 238
WERAM-Fia-0169 ENSFALP00000014680.1 Ficedula albicollis 52 1e-60 231
WERAM-Anp-0138 ENSAPLP00000014931.1 Anas platyrhynchos 52 4e-59 226
WERAM-Chh-0005 ENSCHOP00000000442.1 Choloepus hoffmanni 41 6e-59 225
WERAM-Caj-0217 ENSCJAP00000038116.2 Callithrix jacchus 38 9e-55 211
WERAM-Mae-0065 ENSMEUP00000005887.1 Macropus eugenii 37 1e-54 211
WERAM-Mim-0094 ENSMICP00000008672.1 Microcebus murinus 39 3e-52 203
Created Date 25-Jun-2016