WERAM Information

Tag Content
WERAM ID WERAM-Ran-0117
Ensembl Protein ID ENSRNOP00000024456.3
Gene Name Smn1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000018067.6 ENSRNOT00000024456.5 ENSRNOP00000024456.3
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 5.90e-10 39.8 88 137
Organism Rattus norvegicus
Domain Profile
  Me_Reader Tudor
             Tudor.txt   1 nskvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLek 54 
                           ++k G+++ a ws+dG+ Y+++i    ++v+ ++e++++ y ++++ ++ +L +
  ENSRNOP00000024456.3  88 QWKAGDKCSAVWSEDGCVYPATI----TSVDLKRETCVVVYTGYGNKEEQNLSD 137
                           5999*******************....******************999888876 PP
Protein Sequence
(Fasta)		MAMGSGGAGS EQEDTVLFRR GTGQSDDSDI WDDTALIKAY DKAVASFKHA LKNGDMCETS 60
DKPKGTARRK PAKKNKNQKK NATAPLKQWK AGDKCSAVWS EDGCVYPATI TSVDLKRETC 120
VVVYTGYGNK EEQNLSDLLS PTCEVANNTE QNTQENESQV STDDSEHSSR SLRSKAHSKS 180
KAAPWTSFLP PPPPVPGAGL GPGKPGLRFN GPPPPPPPPP PFLPCWMPPF PSGPPIIPPP 240
PPISPDCLDD TDALGSMLIS WYMSGYHTGY YMGFRQNKKE GKKCSHTN 288
Nucleotide Sequence
(Fasta)		ATTTGGGCGA GCCCAGCCCC GTCCGTGGTA GCAGGCCATG GCGATGGGCA GCGGCGGCGC 60
GGGCTCTGAG CAGGAAGACA CCGTGCTGTT CCGGCGTGGC ACCGGCCAGA GTGATGATTC 120
TGACATTTGG GATGATACAG CATTGATAAA AGCTTACGAT AAAGCCGTGG CTTCCTTTAA 180
GCATGCTCTA AAGAACGGTG ACATGTGTGA AACTTCAGAT AAGCCAAAAG GCACAGCTAG 240
AAGAAAACCT GCTAAGAAGA ATAAAAACCA AAAGAAGAAT GCCACAGCTC CATTGAAACA 300
GTGGAAAGCT GGTGACAAAT GCTCTGCCGT TTGGTCGGAA GATGGCTGCG TTTACCCAGC 360
TACCATCACG TCAGTTGACC TTAAGAGAGA AACCTGTGTC GTGGTTTATA CTGGATATGG 420
AAACAAAGAG GAGCAAAACC TATCTGATCT GCTTTCCCCG ACCTGTGAAG TAGCTAACAA 480
TACAGAACAG AACACTCAGG AGAATGAAAG CCAAGTTTCC ACAGACGACA GTGAACACTC 540
CTCCAGATCG CTCAGAAGTA AAGCACACAG CAAGTCCAAA GCTGCTCCAT GGACCTCGTT 600
TCTCCCTCCA CCTCCCCCGG TGCCCGGGGC GGGATTAGGA CCAGGAAAGC CAGGTCTAAG 660
GTTCAATGGC CCACCGCCGC CGCCACCTCC CCCTCCCCCG TTCTTGCCGT GTTGGATGCC 720
TCCGTTCCCT TCAGGACCAC CAATAATTCC TCCACCCCCT CCCATATCTC CCGACTGTCT 780
GGATGACACG GATGCTCTGG GCAGTATGCT AATCTCTTGG TACATGAGTG GTTACCACAC 840
TGGTTACTAT ATGGGTTTCA GACAAAATAA AAAAGAAGGA AAGAAGTGCT CACATACAAA 900
TTAAGAAGTT CAGCTCTCTC CCAAGGAGAT GGTTTGTTGG TGTCCCTGGT CGATAAGAAC 960
AGAAGTCTCC TCGTCACCTT TGTGGACTCT TGGCTAAGTG GTGTCATCAT CAGGGTCTCC 1020
CTGTCCCGGG AGTCCATCCT GAGTCAGCAG CAGGGCATGC ATAGAGCAGC AGTTGGAGGA 1080
ACCGATCAAT CGATCGATCA GTGGCAGTGT GAGTGCATGG AAGTCAGCCA AACTGTGACT 1140
GAGCACAAAC GGACAATTGC AATTTTCTTA GAATGTCAAG ATTTGTATTA ATGCCTTTAA 1200
AATTAAATAA AAGCCCTTTT TTGAAA 1227
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0038 ENSMUSP00000022147.8 Mus musculus 93 8e-105 377
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 78 1e-83 306
WERAM-Fec-0184 ENSFCAP00000019138.1 Felis catus 78 2e-83 305
WERAM-Orc-0164 ENSOCUP00000014693.2 Oryctolagus cuniculus 77 4e-83 305
WERAM-Nol-0044 ENSNLEP00000005396.1 Nomascus leucogenys 77 6e-83 304
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 80 9e-83 303
WERAM-Caf-0088 ENSCAFP00000011560.3 Canis familiaris 80 1e-82 303
WERAM-Loa-0042 ENSLAFP00000002850.3 Loxodonta africana 77 2e-82 302
WERAM-Hos-0271 ENSP00000483819.1 Homo sapiens 79 8e-82 300
WERAM-Mam-0188 ENSMMUP00000026612.2 Macaca mulatta 81 1e-81 300
WERAM-Pat-0137 ENSPTRP00000029048.4 Pan troglodytes 77 1e-81 300
WERAM-Ict-0106 ENSSTOP00000011013.2 Ictidomys tridecemlineatus 76 2e-81 299
WERAM-Myl-0120 ENSMLUP00000009660.2 Myotis lucifugus 78 3e-81 298
WERAM-Aim-0044 ENSAMEP00000003514.1 Ailuropoda melanoleuca 80 3e-81 298
WERAM-Chs-0190 ENSCSAP00000011744.1 Chlorocebus sabaeus 81 2e-80 296
WERAM-Tut-0062 ENSTTRP00000004775.1 Tursiops truncatus 76 1e-79 293
WERAM-Sus-0126 ENSSSCP00000017979.2 Sus scrofa 79 1e-78 290
WERAM-Bot-0062 ENSBTAP00000007547.5 Bos taurus 73 1e-77 286
WERAM-Mup-0166 ENSMPUP00000014360.1 Mustela putorius furo 81 2e-77 286
WERAM-Paa-0002 ENSPANP00000011285.1 Papio anubis 75 3e-76 282
WERAM-Cap-0137 ENSCPOP00000011091.2 Cavia porcellus 72 4e-73 271
WERAM-Ova-0048 ENSOARP00000005820.1 Ovis aries 72 3e-72 269
WERAM-Poa-0138 ENSPPYP00000017360.2 Pongo abelii 77 4e-72 268
WERAM-Gog-0217 ENSGGOP00000017774.1 Gorilla gorilla 64 1e-69 259
WERAM-Tub-0020 ENSTBEP00000002061.1 Tupaia belangeri 78 2e-67 252
WERAM-Mod-0015 ENSMODP00000001738.1 Monodelphis domestica 61 8e-64 241
WERAM-Caj-0170 ENSCJAP00000015046.2 Callithrix jacchus 77 3e-62 235
WERAM-Ocp-0020 ENSOPRP00000001850.1 Ochotona princeps 74 3e-61 232
WERAM-Otg-0211 ENSOGAP00000018509.1 Otolemur garnettii 69 5e-61 231
WERAM-Sah-0016 ENSSHAP00000001682.1 Sarcophilus harrisii 61 2e-58 223
WERAM-Dan-0060 ENSDNOP00000005641.3 Dasypus novemcinctus 74 5e-55 211
WERAM-Vip-0097 ENSVPAP00000009201.1 Vicugna pacos 86 6e-55 211
WERAM-Ect-0019 ENSETEP00000001131.1 Echinops telfairi 66 1e-54 211
WERAM-Ere-0139 ENSEEUP00000014406.1 Erinaceus europaeus 74 2e-54 209
WERAM-Prc-0042 ENSPCAP00000003902.1 Procavia capensis 74 2e-53 206
WERAM-Chh-0057 ENSCHOP00000006505.1 Choloepus hoffmanni 73 4e-53 205
WERAM-Leo-0107 ENSLOCP00000013933.1 Lepisosteus oculatus 50 7e-47 184
WERAM-Pes-0139 ENSPSIP00000016587.1 Pelodiscus sinensis 52 1e-46 184
WERAM-Ora-0018 ENSOANP00000002597.3 Ornithorhynchus anatinus 63 2e-45 179
WERAM-Gaga-0023 ENSGALP00000003813.3 Gallus gallus 67 8e-45 177
WERAM-Tag-0024 ENSTGUP00000001599.1 Taeniopygia guttata 57 2e-44 176
WERAM-Dio-0066 ENSDORP00000006637.1 Dipodomys ordii 64 2e-43 173
WERAM-Tas-0107 ENSTSYP00000011045.1 Tarsius syrichta 69 3e-41 166
WERAM-Anc-0104 ENSACAP00000009875.2 Anolis carolinensis 57 1e-40 164
WERAM-Xet-0114 ENSXETP00000039449.3 Xenopus tropicalis 54 1e-38 157
WERAM-Mae-0108 ENSMEUP00000010395.1 Macropus eugenii 56 4e-38 155
WERAM-Fia-0151 ENSFALP00000012869.1 Ficedula albicollis 62 5e-38 155
WERAM-Orn-0141 ENSONIP00000014853.1 Oreochromis niloticus 66 3e-37 152
WERAM-Pof-0089 ENSPFOP00000007795.2 Poecilia formosa 56 8e-37 151
WERAM-Xim-0015 ENSXMAP00000001532.1 Xiphophorus maculatus 54 2e-36 150
WERAM-Tar-0006 ENSTRUP00000001767.1 Takifugu rubripes 59 2e-35 146
WERAM-Orla-0110 ENSORLP00000013230.1 Oryzias latipes 58 3e-35 145
WERAM-Ten-0115 ENSTNIP00000012783.1 Tetraodon nigroviridis 60 9e-35 144
WERAM-Gaa-0108 ENSGACP00000014003.1 Gasterosteus aculeatus 55 1e-34 144
WERAM-Dar-0043 ENSDARP00000017636.5 Danio rerio 54 5e-34 142
WERAM-Asm-0149 ENSAMXP00000014288.1 Astyanax mexicanus 61 6e-31 131
WERAM-Gam-0194 ENSGMOP00000018574.1 Gadus morhua 47 3e-30 129
WERAM-Pem-0048 ENSPMAP00000005497.1 Petromyzon marinus 50 6e-25 112
WERAM-Meg-0095 ENSMGAP00000009132.2 Meleagris gallopavo 65 2e-22 103
WERAM-Anp-0092 ENSAPLP00000010654.1 Anas platyrhynchos 56 5e-21 98.6
WERAM-Lac-0090 ENSLACP00000011146.1 Latimeria chalumnae 41 1e-20 97.8
WERAM-Cii-0058 ENSCINP00000026142.2 Ciona intestinalis 32 9e-07 51.6
Created Date 25-Jun-2016