WERAM Information

Tag Content
WERAM ID WERAM-Orla-0110
Ensembl Protein ID ENSORLP00000013230.1
Gene Name smn1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000010552.1 ENSORLT00000013231.1 ENSORLP00000013230.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 5.70e-07 30 81 130
Organism Oryzias latipes
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekg 55 
                           + vG+ + a ws+dG+ Y ++i     +++  + ++++ y ++++ ++ +Le+ 
  ENSORLP00000013230.1  81 WQVGDSCSAYWSEDGQLYAATI----SSIDWIKGTCVVVYTGYGNEEEQNLEDL 130
                           89********************....********************99999986 PP
Protein Sequence
(Fasta)		MANGCKEVLF SRGSGQSDDS DIWDDTALIK AYDKAVASFK TALKGEGEPQ SSKKIPPGKK 60
RKNSKKNQSR KRNNGPGEKE WQVGDSCSAY WSEDGQLYAA TISSIDWIKG TCVVVYTGYG 120
NEEEQNLEDL LSEISEADEE SQFKRNEAES STEESDRSST PNLSKHQPPP SQAFRQRKNQ 180
QSSDPGPVPP PWPPMMPFGP PMIPPPPPMS PDMVDDEALG SVLISWYMSG YHTGYYLGLK 240
QGRKEAAKWT KLHHK 255
Nucleotide Sequence
(Fasta)		TAGACTTTAG CAATAGCTTG GATCGCATTT ACGTTTCACA TGGCGAATGG GTGTAAAGAA 60
GTGTTGTTTA GTCGTGGAAG TGGACAGAGT GATGATTCAG ATATTTGGGA TGACACTGCT 120
CTCATAAAAG CATATGACAA AGCAGTAGCA TCGTTCAAGA CTGCCCTGAA GGGGGAAGGT 180
GAACCACAAT CTTCCAAGAA AATTCCCCCA GGGAAGAAAC GCAAGAACAG CAAAAAGAAC 240
CAGAGCAGGA AAAGAAACAA TGGACCAGGG GAGAAGGAGT GGCAGGTTGG GGACTCCTGC 300
AGTGCGTATT GGTCAGAAGA TGGCCAGCTT TATGCTGCCA CCATCTCTTC TATAGACTGG 360
ATCAAAGGCA CCTGTGTAGT TGTCTATACA GGTTATGGCA ACGAGGAGGA GCAGAACCTT 420
GAGGACCTGC TTTCAGAAAT TTCCGAGGCA GATGAGGAAT CTCAGTTTAA GAGAAATGAA 480
GCAGAATCGT CCACTGAGGA GAGTGACAGG TCGAGCACGC CAAACCTAAG CAAACATCAG 540
CCACCTCCCT CGCAAGCGTT CAGACAGAGG AAAAATCAGC AATCCAGTGA TCCTGGACCT 600
GTACCTCCTC CCTGGCCTCC CATGATGCCC TTTGGCCCAC CTATGATTCC TCCACCTCCA 660
CCCATGAGTC CTGACATGGT GGATGATGAA GCCTTGGGAA GTGTGCTCAT TTCTTGGTAC 720
ATGAGTGGAT ATCACACAGG ATACTACCTG GGGTTAAAGC AAGGACGCAA AGAAGCTGCC 780
AAGTGGACAA AACTGCACCA CAAATGAAAG GAAACATTTG AGGGATTTAA GACCTTCTAC 840
TTTTGAATGA ACTGCTTTGG TCATGTTGGT AAATCCGTTC AAAATGTCTT GGATTCATTT 900
GTAAATATAG TAAAATAAAG ACTACTACGA CCGTGTTTGT TCAGTGTTTT TTAAGAAAAT 960
ATGAAGACTT GAAAATAAAA TCTAAACTTT TAT 994
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0141 ENSONIP00000014853.1 Oreochromis niloticus 76 3e-76 281
WERAM-Xim-0015 ENSXMAP00000001532.1 Xiphophorus maculatus 74 5e-74 274
WERAM-Pof-0089 ENSPFOP00000007795.2 Poecilia formosa 74 1e-73 273
WERAM-Gaa-0108 ENSGACP00000014003.1 Gasterosteus aculeatus 77 5e-73 271
WERAM-Ten-0115 ENSTNIP00000012783.1 Tetraodon nigroviridis 65 1e-62 236
WERAM-Tar-0006 ENSTRUP00000001767.1 Takifugu rubripes 61 1e-59 226
WERAM-Gam-0194 ENSGMOP00000018574.1 Gadus morhua 60 2e-54 209
WERAM-Asm-0149 ENSAMXP00000014288.1 Astyanax mexicanus 63 2e-54 209
WERAM-Anc-0104 ENSACAP00000009875.2 Anolis carolinensis 50 9e-49 190
WERAM-Leo-0107 ENSLOCP00000013933.1 Lepisosteus oculatus 50 4e-47 185
WERAM-Gaga-0023 ENSGALP00000003813.3 Gallus gallus 51 7e-47 184
WERAM-Gog-0039 ENSGGOP00000003799.2 Gorilla gorilla 54 9e-42 167
WERAM-Dar-0043 ENSDARP00000017636.5 Danio rerio 70 7e-41 164
WERAM-Pes-0139 ENSPSIP00000016587.1 Pelodiscus sinensis 49 1e-40 164
WERAM-Tut-0062 ENSTTRP00000004775.1 Tursiops truncatus 65 2e-36 149
WERAM-Tub-0020 ENSTBEP00000002061.1 Tupaia belangeri 66 3e-36 149
WERAM-Paa-0095 ENSPANP00000003940.1 Papio anubis 67 3e-36 149
WERAM-Caj-0170 ENSCJAP00000015046.2 Callithrix jacchus 67 4e-36 149
WERAM-Mam-0188 ENSMMUP00000026612.2 Macaca mulatta 67 6e-36 148
WERAM-Nol-0044 ENSNLEP00000005396.1 Nomascus leucogenys 67 2e-35 146
WERAM-Tag-0024 ENSTGUP00000001599.1 Taeniopygia guttata 62 2e-35 145
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 64 3e-35 145
WERAM-Pat-0137 ENSPTRP00000029048.4 Pan troglodytes 66 3e-35 145
WERAM-Hos-0271 ENSP00000483819.1 Homo sapiens 66 3e-35 145
WERAM-Chs-0190 ENSCSAP00000011744.1 Chlorocebus sabaeus 68 3e-35 145
WERAM-Aim-0044 ENSAMEP00000003514.1 Ailuropoda melanoleuca 66 3e-35 145
WERAM-Fec-0184 ENSFCAP00000019138.1 Felis catus 66 5e-35 145
WERAM-Bot-0062 ENSBTAP00000007547.5 Bos taurus 63 5e-35 144
WERAM-Mup-0166 ENSMPUP00000014360.1 Mustela putorius furo 66 6e-35 144
WERAM-Mum-0038 ENSMUSP00000022147.8 Mus musculus 65 7e-35 144
WERAM-Sus-0126 ENSSSCP00000017979.2 Sus scrofa 66 7e-35 144
WERAM-Ict-0106 ENSSTOP00000011013.2 Ictidomys tridecemlineatus 64 8e-35 144
WERAM-Caf-0088 ENSCAFP00000011560.3 Canis familiaris 65 8e-35 144
WERAM-Myl-0120 ENSMLUP00000009660.2 Myotis lucifugus 65 1e-34 143
WERAM-Cap-0137 ENSCPOP00000011091.2 Cavia porcellus 64 2e-34 143
WERAM-Mod-0015 ENSMODP00000001738.1 Monodelphis domestica 62 2e-34 143
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 65 4e-34 142
WERAM-Orc-0164 ENSOCUP00000014693.2 Oryctolagus cuniculus 64 8e-34 141
WERAM-Vip-0097 ENSVPAP00000009201.1 Vicugna pacos 66 1e-33 140
WERAM-Ran-0117 ENSRNOP00000024456.3 Rattus norvegicus 63 1e-33 140
WERAM-Ora-0018 ENSOANP00000002597.3 Ornithorhynchus anatinus 65 4e-33 138
WERAM-Loa-0042 ENSLAFP00000002850.3 Loxodonta africana 67 4e-33 138
WERAM-Fia-0151 ENSFALP00000012869.1 Ficedula albicollis 67 4e-32 135
WERAM-Dio-0066 ENSDORP00000006637.1 Dipodomys ordii 55 7e-32 134
WERAM-Ova-0048 ENSOARP00000005820.1 Ovis aries 60 2e-31 133
WERAM-Xet-0114 ENSXETP00000039449.3 Xenopus tropicalis 54 3e-31 132
WERAM-Sah-0016 ENSSHAP00000001682.1 Sarcophilus harrisii 56 4e-31 132
WERAM-Poa-0138 ENSPPYP00000017360.2 Pongo abelii 64 7e-31 131
WERAM-Ere-0139 ENSEEUP00000014406.1 Erinaceus europaeus 64 9e-31 130
WERAM-Otg-0211 ENSOGAP00000018509.1 Otolemur garnettii 56 3e-30 129
WERAM-Ocp-0020 ENSOPRP00000001850.1 Ochotona princeps 65 3e-30 129
WERAM-Meg-0095 ENSMGAP00000009132.2 Meleagris gallopavo 46 5e-29 125
WERAM-Prc-0042 ENSPCAP00000003902.1 Procavia capensis 64 6e-29 124
WERAM-Chh-0057 ENSCHOP00000006505.1 Choloepus hoffmanni 65 1e-28 124
WERAM-Dan-0193 ENSDNOP00000024307.1 Dasypus novemcinctus 59 4e-27 118
WERAM-Pem-0048 ENSPMAP00000005497.1 Petromyzon marinus 48 7e-24 108
WERAM-Ect-0019 ENSETEP00000001131.1 Echinops telfairi 55 2e-23 106
WERAM-Lac-0090 ENSLACP00000011146.1 Latimeria chalumnae 41 8e-20 94.7
WERAM-Tas-0107 ENSTSYP00000011045.1 Tarsius syrichta 71 4e-19 92.4
WERAM-Mae-0108 ENSMEUP00000010395.1 Macropus eugenii 64 3e-17 86.3
WERAM-Anp-0092 ENSAPLP00000010654.1 Anas platyrhynchos 69 5e-16 82.0
WERAM-Cis-0062 ENSCSAVP00000014330.1 Ciona savignyi 26 8e-10 61.2
WERAM-Cii-0058 ENSCINP00000026142.2 Ciona intestinalis 28 2e-07 53.1
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 52 2e-06 50.4
WERAM-Chr-0026 EDP07443 Chlamydomonas reinhardtii 48 3e-06 49.3
Created Date 25-Jun-2016