WERAM Information

Tag Content
WERAM ID WERAM-Gam-0194
Ensembl Protein ID ENSGMOP00000018574.1
Gene Name smn1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGMOG00000017279.1 ENSGMOT00000019030.1 ENSGMOP00000018574.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 5.50e-06 26.7 87 135
Organism Gadus morhua
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLek 54 
                           + vG+ + a ws+dG+ Y ++i      ++ ++  +++ + d+++ ++ sL +
  ENSGMOP00000018574.1  87 WQVGDSCCAYWSEDGQLYAATI----CGIDKKRGSCTVLFTDYGNQEEQSLQD 135
                           89********************....9******************99999865 PP
Protein Sequence
(Fasta)		VFTGGDMANR REDVVFARGA AQSDDSDIWD DTALIKAYDK AVATFKTALK DEKDPPAFKK 60
DHPGKKRKGN KNDLSRKRSN APPDKEWQVG DSCCAYWSED GQLYAATICG IDKKRGSCTV 120
LFTDYGNQEE QSLQDLLLEN SEVDEETCVK NEAESSTEES DRSTTPQSHR RQAHNKPPKY 180
KSPREPPPLL PPGLPGFPKG GSKHSSGPVP PAWPPMMPCG PPMIPPPPPM SPDMENDEAL 240
GAMLISWYMS GYHTGYYLGL KQAQKESAPR KKSNHK 276
Nucleotide Sequence
(Fasta)		GTATTCACCG GCGGAGACAT GGCGAACAGG AGAGAGGACG TGGTTTTCGC CCGTGGAGCT 60
GCGCAGAGTG ATGATTCTGA CATATGGGAT GACACTGCTC TGATAAAGGC ATATGATAAG 120
GCTGTCGCGA CGTTCAAGAC TGCACTTAAA GATGAAAAAG ACCCACCGGC CTTCAAGAAA 180
GACCACCCAG GAAAGAAGCG CAAGGGCAAC AAAAATGATC TCAGCAGGAA AAGGAGTAAT 240
GCACCCCCAG ACAAAGAGTG GCAGGTTGGA GACTCTTGCT GTGCATACTG GTCAGAGGAT 300
GGCCAGCTGT ATGCTGCCAC AATTTGCGGC ATAGACAAGA AGAGGGGCAG TTGTACAGTT 360
TTATTTACAG ACTATGGCAA TCAGGAGGAG CAAAGCCTTC AAGATTTGCT CTTGGAAAAC 420
TCTGAGGTCG ATGAAGAAAC TTGTGTTAAG AATGAAGCAG AATCTTCCAC AGAGGAGAGC 480
GACCGGTCTA CTACACCTCA ATCTCACAGA CGGCAAGCAC ACAACAAGCC CCCAAAATAC 540
AAATCCCCCA GAGAACCCCC TCCACTGTTG CCCCCTGGTC TTCCTGGATT TCCCAAGGGA 600
GGAAGTAAAC ACTCCAGTGG CCCCGTCCCT CCAGCCTGGC CCCCCATGAT GCCCTGCGGT 660
CCCCCAATGA TCCCGCCCCC TCCACCCATG AGCCCTGACA TGGAGAATGA CGAGGCCCTG 720
GGTGCCATGC TCATCTCCTG GTACATGAGC GGCTACCACA CAGGATACTA TCTGGGGTTG 780
AAACAAGCAC AAAAAGAATC TGCTCCACGC AAGAAGTCCA ACCACAAGTA A 832
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Gaa-0108 ENSGACP00000014003.1 Gasterosteus aculeatus 67 8e-57 217
WERAM-Orn-0141 ENSONIP00000014853.1 Oreochromis niloticus 73 2e-45 179
WERAM-Xim-0015 ENSXMAP00000001532.1 Xiphophorus maculatus 75 3e-44 176
WERAM-Orla-0110 ENSORLP00000013230.1 Oryzias latipes 68 3e-44 175
WERAM-Pof-0089 ENSPFOP00000007795.2 Poecilia formosa 74 9e-44 174
WERAM-Ten-0115 ENSTNIP00000012783.1 Tetraodon nigroviridis 64 2e-41 166
WERAM-Tar-0006 ENSTRUP00000001767.1 Takifugu rubripes 66 9e-41 164
WERAM-Dar-0043 ENSDARP00000017636.5 Danio rerio 69 4e-37 152
WERAM-Asm-0149 ENSAMXP00000014288.1 Astyanax mexicanus 62 1e-33 140
WERAM-Gaga-0023 ENSGALP00000003813.3 Gallus gallus 59 9e-33 137
WERAM-Tag-0024 ENSTGUP00000001599.1 Taeniopygia guttata 56 4e-31 132
WERAM-Pes-0139 ENSPSIP00000016587.1 Pelodiscus sinensis 61 8e-31 131
WERAM-Xet-0114 ENSXETP00000039449.3 Xenopus tropicalis 57 1e-30 130
WERAM-Tut-0062 ENSTTRP00000004775.1 Tursiops truncatus 57 2e-30 130
WERAM-Paa-0095 ENSPANP00000003940.1 Papio anubis 54 2e-30 130
WERAM-Mup-0166 ENSMPUP00000014360.1 Mustela putorius furo 54 2e-30 129
WERAM-Bot-0062 ENSBTAP00000007547.5 Bos taurus 57 3e-30 129
WERAM-Leo-0107 ENSLOCP00000013933.1 Lepisosteus oculatus 61 4e-30 129
WERAM-Myl-0120 ENSMLUP00000009660.2 Myotis lucifugus 54 4e-30 129
WERAM-Fia-0151 ENSFALP00000012869.1 Ficedula albicollis 60 7e-30 128
WERAM-Caj-0170 ENSCJAP00000015046.2 Callithrix jacchus 53 1e-29 127
WERAM-Mam-0188 ENSMMUP00000026612.2 Macaca mulatta 55 3e-29 126
WERAM-Nol-0044 ENSNLEP00000005396.1 Nomascus leucogenys 53 3e-29 126
WERAM-Mod-0015 ENSMODP00000001738.1 Monodelphis domestica 53 4e-29 125
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 56 4e-29 125
WERAM-Cap-0137 ENSCPOP00000011091.2 Cavia porcellus 52 5e-29 125
WERAM-Loa-0042 ENSLAFP00000002850.3 Loxodonta africana 54 5e-29 125
WERAM-Fec-0184 ENSFCAP00000019138.1 Felis catus 55 7e-29 124
WERAM-Aim-0044 ENSAMEP00000003514.1 Ailuropoda melanoleuca 53 7e-29 124
WERAM-Ova-0048 ENSOARP00000005820.1 Ovis aries 56 7e-29 124
WERAM-Mum-0038 ENSMUSP00000022147.8 Mus musculus 52 7e-29 124
WERAM-Ict-0106 ENSSTOP00000011013.2 Ictidomys tridecemlineatus 53 3e-28 122
WERAM-Caf-0088 ENSCAFP00000011560.3 Canis familiaris 55 3e-28 122
WERAM-Tub-0020 ENSTBEP00000002061.1 Tupaia belangeri 54 4e-28 122
WERAM-Pat-0137 ENSPTRP00000029048.4 Pan troglodytes 54 6e-28 121
WERAM-Hos-0271 ENSP00000483819.1 Homo sapiens 54 6e-28 121
WERAM-Gog-0039 ENSGGOP00000003799.2 Gorilla gorilla 54 6e-28 121
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 54 1e-27 120
WERAM-Orc-0164 ENSOCUP00000014693.2 Oryctolagus cuniculus 52 3e-27 119
WERAM-Ora-0018 ENSOANP00000002597.3 Ornithorhynchus anatinus 55 9e-27 117
WERAM-Chs-0190 ENSCSAP00000011744.1 Chlorocebus sabaeus 55 1e-26 117
WERAM-Vip-0097 ENSVPAP00000009201.1 Vicugna pacos 57 2e-26 117
WERAM-Anc-0104 ENSACAP00000009875.2 Anolis carolinensis 59 2e-26 116
WERAM-Sus-0126 ENSSSCP00000017979.2 Sus scrofa 57 4e-26 115
WERAM-Ran-0117 ENSRNOP00000024456.3 Rattus norvegicus 50 6e-26 115
WERAM-Ere-0139 ENSEEUP00000014406.1 Erinaceus europaeus 57 1e-25 114
WERAM-Dan-0193 ENSDNOP00000024307.1 Dasypus novemcinctus 50 2e-25 113
WERAM-Ocp-0020 ENSOPRP00000001850.1 Ochotona princeps 57 3e-25 112
WERAM-Sah-0016 ENSSHAP00000001682.1 Sarcophilus harrisii 51 4e-25 112
WERAM-Poa-0138 ENSPPYP00000017360.2 Pongo abelii 56 4e-25 112
WERAM-Chh-0057 ENSCHOP00000006505.1 Choloepus hoffmanni 57 1e-24 110
WERAM-Prc-0042 ENSPCAP00000003902.1 Procavia capensis 57 4e-23 105
WERAM-Dio-0066 ENSDORP00000006637.1 Dipodomys ordii 43 1e-22 103
WERAM-Otg-0211 ENSOGAP00000018509.1 Otolemur garnettii 47 1e-21 100
WERAM-Ect-0019 ENSETEP00000001131.1 Echinops telfairi 46 5e-19 92.0
WERAM-Pem-0005 ENSPMAP00000000309.1 Petromyzon marinus 49 3e-18 89.7
WERAM-Lac-0090 ENSLACP00000011146.1 Latimeria chalumnae 37 3e-14 76.6
WERAM-Tas-0107 ENSTSYP00000011045.1 Tarsius syrichta 56 2e-13 73.2
WERAM-Mae-0108 ENSMEUP00000010395.1 Macropus eugenii 61 8e-12 68.2
WERAM-Anp-0092 ENSAPLP00000010654.1 Anas platyrhynchos 72 3e-11 66.2
WERAM-Meg-0095 ENSMGAP00000009132.2 Meleagris gallopavo 67 1e-10 64.3
WERAM-Cis-0062 ENSCSAVP00000014330.1 Ciona savignyi 28 5e-06 49.3
Created Date 25-Jun-2016