WERAM Information

Tag Content
WERAM ID WERAM-Sus-0126
Ensembl Protein ID ENSSSCP00000017979.2
Gene Name SMN1 SMN
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000016970.2 ENSSSCT00000018479.2 ENSSSCP00000017979.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 7.70e-12 45.6 91 140
Organism Sus scrofa
Domain Profile
  Me_Reader Tudor
             Tudor.txt   1 nskvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLek 54 
                           ++kvG+r+ a ws+dG++Y+++i    ++++ ++e++ + y ++++ ++ +L +
  ENSSSCP00000017979.2  91 QWKVGDRCSAIWSEDGCIYPATI----ASIDFKRETCIVVYTGYGNREEQNLSD 140
                           59*********************....********************9998876 PP
Protein Sequence
(Fasta)		MAMGGGGGGS GVPEAEDSVL FRRGAGQSDD SDIWDDTALI KAYDKAVASF KHALKNGDIS 60
EASDKPKATP KRKPPKKNKS QKKNTTASLK QWKVGDRCSA IWSEDGCIYP ATIASIDFKR 120
ETCIVVYTGY GNREEQNLSD LLSPTSEVAN NIEENAQENE NESQISTDES ESSSRSPGNK 180
PNNIKSKAAP WNSFLPPPPP MPGAGLGPRK PGLKFNGPPP PPPPPPHFLS CWLPPFPSGP 240
PIIPPPPPIC PDSLDDADAL GSMLISWYMS GYHTGYYMGF KQNQKEGRCS HFN 293
Nucleotide Sequence
(Fasta)		GGACTGAGCC CACGCCGCGC ACCCAGCAGT AGGCGCGCCA TGGCGATGGG CGGCGGTGGC 60
GGCGGCAGCG GTGTTCCTGA GGCGGAGGAC TCGGTGCTGT TCCGGCGCGG TGCAGGCCAG 120
AGTGATGATT CGGACATTTG GGATGATACA GCGTTGATAA AAGCTTATGA TAAAGCTGTG 180
GCTTCATTTA AGCATGCTCT AAAGAATGGT GACATTTCCG AAGCTTCAGA TAAACCAAAA 240
GCCACACCTA AAAGAAAACC TCCTAAGAAG AATAAAAGCC AAAAAAAGAA TACCACAGCC 300
TCCTTGAAGC AGTGGAAGGT TGGTGACAGA TGTTCTGCCA TTTGGTCGGA AGATGGCTGC 360
ATTTACCCAG CTACCATTGC TTCGATTGAT TTTAAGAGAG AAACCTGTAT TGTGGTTTAC 420
ACTGGATATG GAAATAGAGA AGAGCAAAAT CTGTCTGATT TACTTTCCCC CACCTCTGAA 480
GTAGCTAATA ATATAGAAGA GAATGCTCAG GAGAATGAAA ATGAAAGTCA AATTTCCACA 540
GATGAAAGTG AGAGCTCCTC CAGATCTCCT GGAAATAAGC CAAATAACAT CAAGTCAAAA 600
GCTGCTCCAT GGAACTCTTT TCTCCCTCCA CCACCCCCTA TGCCAGGAGC AGGTCTTGGA 660
CCAAGAAAGC CAGGTCTAAA ATTCAACGGC CCACCACCAC CACCACCGCC ACCGCCACAC 720
TTCCTGTCAT GCTGGCTGCC TCCGTTTCCT TCTGGACCAC CAATAATTCC CCCCCCACCT 780
CCTATATGTC CAGATTCTCT GGATGATGCT GATGCTTTGG GAAGTATGTT AATCTCTTGG 840
TACATGAGTG GCTATCATAC TGGTTACTAT ATGGGTTTCA AACAAAATCA AAAAGAAGGA 900
AGATGCTCAC ATTTCAATTA AGGAGTAAAT CATACGGTGT TCTGTAATAG GTGCAGTTCT 960
CTCCCAAGGA GAATGGTATT TTGATGTGCC CTGGTCGATA TGAACAAAAG TTTCATCATT 1020
TTCTTCATGA ACACTCAGAT GGGTGCATGT CATCTTCATT TGCCCCTCGA TGCATGTGAC 1080
TCTTGCTTAA ATAACCAGTT AAATGTTTTA AGGGAATAAT CAGTTTGAAT AACTGAACAG 1140
TGGAAATATG AGTAATTAAA AGAAACTCAA GGTCACATAC AGTACAGAAA GTGAATCTGT 1200
CAAAATTGAG GCTTAGCACA TTTGTATATT GTAACTTTCT TAGTCTGTTA AGCTTTTATT 1260
AATGCCTTTA AAATAAATGA TAATTTTTTT AACATTGA 1299
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 93 5e-103 371
WERAM-Fec-0184 ENSFCAP00000019138.1 Felis catus 93 1e-99 360
WERAM-Caf-0088 ENSCAFP00000011560.3 Canis familiaris 91 8e-99 357
WERAM-Aim-0044 ENSAMEP00000003514.1 Ailuropoda melanoleuca 92 4e-98 355
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 89 2e-96 349
WERAM-Myl-0120 ENSMLUP00000009660.2 Myotis lucifugus 90 3e-96 348
WERAM-Ict-0106 ENSSTOP00000011013.2 Ictidomys tridecemlineatus 90 2e-95 345
WERAM-Nol-0044 ENSNLEP00000005396.1 Nomascus leucogenys 83 3e-94 342
WERAM-Mam-0188 ENSMMUP00000026612.2 Macaca mulatta 83 4e-94 342
WERAM-Hos-0271 ENSP00000483819.1 Homo sapiens 83 5e-94 341
WERAM-Pat-0137 ENSPTRP00000029048.4 Pan troglodytes 82 1e-93 340
WERAM-Orc-0164 ENSOCUP00000014693.2 Oryctolagus cuniculus 85 2e-92 335
WERAM-Chs-0190 ENSCSAP00000011744.1 Chlorocebus sabaeus 82 3e-92 335
WERAM-Loa-0042 ENSLAFP00000002850.3 Loxodonta africana 86 6e-91 331
WERAM-Bot-0062 ENSBTAP00000007547.5 Bos taurus 86 3e-90 328
WERAM-Mup-0166 ENSMPUP00000014360.1 Mustela putorius furo 91 2e-88 322
WERAM-Paa-0002 ENSPANP00000011285.1 Papio anubis 77 5e-86 314
WERAM-Cap-0137 ENSCPOP00000011091.2 Cavia porcellus 81 4e-85 311
WERAM-Poa-0138 ENSPPYP00000017360.2 Pongo abelii 82 1e-84 310
WERAM-Tut-0062 ENSTTRP00000004775.1 Tursiops truncatus 86 2e-84 309
WERAM-Ova-0048 ENSOARP00000005820.1 Ovis aries 84 4e-83 305
WERAM-Mum-0038 ENSMUSP00000022147.8 Mus musculus 79 1e-82 303
WERAM-Ran-0117 ENSRNOP00000024456.3 Rattus norvegicus 78 3e-81 299
WERAM-Caj-0170 ENSCJAP00000015046.2 Callithrix jacchus 79 3e-81 298
WERAM-Prc-0042 ENSPCAP00000003902.1 Procavia capensis 80 6e-78 288
WERAM-Otg-0211 ENSOGAP00000018509.1 Otolemur garnettii 74 3e-76 282
WERAM-Gog-0217 ENSGGOP00000017774.1 Gorilla gorilla 68 3e-76 282
WERAM-Mod-0015 ENSMODP00000001738.1 Monodelphis domestica 70 1e-73 273
WERAM-Ocp-0020 ENSOPRP00000001850.1 Ochotona princeps 83 5e-72 268
WERAM-Dan-0060 ENSDNOP00000005641.3 Dasypus novemcinctus 87 5e-69 258
WERAM-Ere-0139 ENSEEUP00000014406.1 Erinaceus europaeus 82 1e-68 257
WERAM-Sah-0016 ENSSHAP00000001682.1 Sarcophilus harrisii 68 4e-68 255
WERAM-Tub-0020 ENSTBEP00000002061.1 Tupaia belangeri 86 2e-65 246
WERAM-Ora-0018 ENSOANP00000002597.3 Ornithorhynchus anatinus 64 1e-60 230
WERAM-Vip-0097 ENSVPAP00000009201.1 Vicugna pacos 91 6e-57 218
WERAM-Gaga-0023 ENSGALP00000003813.3 Gallus gallus 55 8e-57 218
WERAM-Tag-0024 ENSTGUP00000001599.1 Taeniopygia guttata 62 1e-55 213
WERAM-Chh-0057 ENSCHOP00000006505.1 Choloepus hoffmanni 88 5e-54 208
WERAM-Fia-0151 ENSFALP00000012869.1 Ficedula albicollis 62 3e-52 202
WERAM-Pes-0139 ENSPSIP00000016587.1 Pelodiscus sinensis 56 1e-51 200
WERAM-Anc-0104 ENSACAP00000009875.2 Anolis carolinensis 56 1e-51 200
WERAM-Xet-0114 ENSXETP00000039449.3 Xenopus tropicalis 57 6e-49 191
WERAM-Dio-0066 ENSDORP00000006637.1 Dipodomys ordii 65 2e-44 177
WERAM-Mae-0108 ENSMEUP00000010395.1 Macropus eugenii 65 2e-44 176
WERAM-Ect-0019 ENSETEP00000001131.1 Echinops telfairi 72 4e-44 175
WERAM-Tas-0107 ENSTSYP00000011045.1 Tarsius syrichta 74 1e-43 174
WERAM-Orn-0141 ENSONIP00000014853.1 Oreochromis niloticus 69 1e-38 157
WERAM-Xim-0015 ENSXMAP00000001532.1 Xiphophorus maculatus 67 5e-37 152
WERAM-Tar-0006 ENSTRUP00000001767.1 Takifugu rubripes 65 2e-36 150
WERAM-Orla-0110 ENSORLP00000013230.1 Oryzias latipes 66 2e-36 150
WERAM-Pof-0089 ENSPFOP00000007795.2 Poecilia formosa 67 2e-36 150
WERAM-Ten-0115 ENSTNIP00000012783.1 Tetraodon nigroviridis 63 3e-35 146
WERAM-Gaa-0108 ENSGACP00000014003.1 Gasterosteus aculeatus 67 4e-35 145
WERAM-Meg-0095 ENSMGAP00000009132.2 Meleagris gallopavo 50 5e-34 142
WERAM-Leo-0107 ENSLOCP00000013933.1 Lepisosteus oculatus 60 3e-33 139
WERAM-Pem-0048 ENSPMAP00000005497.1 Petromyzon marinus 41 2e-32 136
WERAM-Dar-0043 ENSDARP00000017636.5 Danio rerio 64 2e-32 136
WERAM-Asm-0149 ENSAMXP00000014288.1 Astyanax mexicanus 61 5e-31 132
WERAM-Anp-0092 ENSAPLP00000010654.1 Anas platyrhynchos 56 8e-31 131
WERAM-Gam-0194 ENSGMOP00000018574.1 Gadus morhua 58 2e-30 130
WERAM-Lac-0090 ENSLACP00000011146.1 Latimeria chalumnae 40 1e-21 101
Created Date 25-Jun-2016