WERAM Information

Tag Content
WERAM ID WERAM-Pat-0137
Ensembl Protein ID ENSPTRP00000029048.4
Gene Name SMN1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPTRG00000016955.4 ENSPTRT00000031451.4 ENSPTRP00000029048.4
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 5.50e-12 45.7 91 143
Organism Pan troglodytes
Domain Profile
  Me_Reader Tudor
             Tudor.txt   1 nskvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnr 57 
                           ++kvG+++ a ws+dG++Y+++i    ++++ ++e++++ y ++++ ++ +L +  +
  ENSPTRP00000029048.4  91 QWKVGDKCSAIWSEDGCIYPATI----ASIDFKRETCVVVYTGYGNREEQNLSDLLS 143
                           59*********************....*********************999987655 PP
Protein Sequence
(Fasta)		MAMSSGGSGG GVPEQEDSVL FRRGTGQSDD SDIWDDTALI KAYDKAVASF KHALKNGDIC 60
ETSGKPKTTP KRKPAKKNKS QKKNTAASLQ QWKVGDKCSA IWSEDGCIYP ATIASIDFKR 120
ETCVVVYTGY GNREEQNLSD LLSPICEVAN NIEQNAQENE NESQVSTDES ENSRSPGNKS 180
DNIKPKSAPW NSFLPPPPPM PGPRLGPGKP GLKFNGPPPP LPPPPPPPPH LLSCWLPPFP 240
SGPPIIPPPP PICPDSLDDA DALGSMLISW YMSGYHTGYY MGFRQNQKEG RCSHSLN 297
Nucleotide Sequence
(Fasta)		ACTCTTAAGA AGGGACGGGG CCCCACGCTG CGCACCCGTA GGTTTGCTAT GGCGATGAGC 60
AGCGGCGGCA GTGGTGGCGG CGTCCCGGAG CAGGAGGATT CCGTGCTGTT CCGGCGCGGC 120
ACAGGCCAGA GCGATGATTC TGACATTTGG GATGATACAG CATTGATAAA AGCATATGAT 180
AAAGCTGTGG CTTCATTTAA GCATGCTCTA AAGAATGGTG ACATTTGTGA AACTTCAGGT 240
AAACCAAAAA CCACACCTAA AAGAAAACCT GCTAAGAAGA ATAAAAGCCA AAAGAAGAAT 300
ACTGCAGCTT CCTTACAACA GTGGAAAGTT GGGGACAAAT GTTCTGCCAT TTGGTCAGAA 360
GACGGTTGCA TTTACCCAGC TACCATTGCT TCAATTGATT TCAAGAGAGA AACCTGTGTT 420
GTGGTTTACA CTGGATATGG AAATAGAGAG GAGCAAAATC TGTCCGATCT ACTTTCCCCA 480
ATCTGTGAAG TAGCTAATAA TATAGAACAG AATGCTCAAG AGAATGAAAA TGAAAGCCAA 540
GTTTCAACAG ATGAAAGTGA GAACTCCAGG TCTCCTGGAA ATAAATCAGA TAACATCAAG 600
CCCAAATCTG CTCCATGGAA CTCTTTTCTC CCTCCACCAC CCCCCATGCC AGGGCCAAGA 660
CTGGGACCAG GAAAGCCAGG TCTAAAATTC AATGGCCCAC CACCGCCACT GCCACCACCA 720
CCACCACCAC CACCCCACTT ACTATCATGC TGGCTGCCTC CATTTCCTTC TGGACCACCA 780
ATAATTCCCC CACCACCTCC CATATGTCCA GATTCTCTTG ATGATGCTGA TGCTTTGGGA 840
AGTATGTTAA TTTCATGGTA CATGAGTGGC TATCATACTG GCTATTATAT GGGTTTCAGA 900
CAAAATCAAA AAGAAGGAAG GTGCTCACAT TCCTTAAATT AAGGAGTAAG TCTGCCAGCA 960
TTATGAAAGT GAATCTTACT TTTGTAAAAC TTTATGGTTT GTGGAAAACA AATGTTTTTG 1020
AACATTTAAA AAGTTCAGAT GTTAAAAAGT TGAAAGGTTA ATATAAAACA ATCAATA 1078
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Gog-0039 ENSGGOP00000003799.2 Gorilla gorilla 100 2e-76 283
WERAM-Hos-0271 ENSP00000483819.1 Homo sapiens 100 4e-76 281
WERAM-Nol-0044 ENSNLEP00000005396.1 Nomascus leucogenys 98 1e-74 276
WERAM-Paa-0095 ENSPANP00000003940.1 Papio anubis 96 6e-73 271
WERAM-Mam-0188 ENSMMUP00000026612.2 Macaca mulatta 97 1e-72 270
WERAM-Chs-0190 ENSCSAP00000011744.1 Chlorocebus sabaeus 96 6e-72 268
WERAM-Caj-0170 ENSCJAP00000015046.2 Callithrix jacchus 95 2e-70 262
WERAM-Mup-0166 ENSMPUP00000014360.1 Mustela putorius furo 89 4e-66 248
WERAM-Caf-0088 ENSCAFP00000011560.3 Canis familiaris 87 5e-66 248
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 87 1e-65 246
WERAM-Poa-0138 ENSPPYP00000017360.2 Pongo abelii 98 3e-65 246
WERAM-Aim-0044 ENSAMEP00000003514.1 Ailuropoda melanoleuca 87 3e-65 246
WERAM-Fec-0184 ENSFCAP00000019138.1 Felis catus 88 6e-65 244
WERAM-Tub-0020 ENSTBEP00000002061.1 Tupaia belangeri 87 8e-65 244
WERAM-Ict-0106 ENSSTOP00000011013.2 Ictidomys tridecemlineatus 86 1e-64 243
WERAM-Sus-0126 ENSSSCP00000017979.2 Sus scrofa 87 3e-64 242
WERAM-Tut-0062 ENSTTRP00000004775.1 Tursiops truncatus 86 3e-63 239
WERAM-Loa-0042 ENSLAFP00000002850.3 Loxodonta africana 83 7e-63 238
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 85 1e-62 236
WERAM-Orc-0164 ENSOCUP00000014693.2 Oryctolagus cuniculus 84 1e-62 236
WERAM-Myl-0120 ENSMLUP00000009660.2 Myotis lucifugus 87 1e-62 236
WERAM-Bot-0062 ENSBTAP00000007547.5 Bos taurus 80 1e-58 223
WERAM-Mum-0038 ENSMUSP00000022147.8 Mus musculus 77 2e-58 223
WERAM-Otg-0211 ENSOGAP00000018509.1 Otolemur garnettii 77 3e-58 222
WERAM-Ran-0117 ENSRNOP00000024456.3 Rattus norvegicus 74 3e-56 216
WERAM-Cap-0137 ENSCPOP00000011091.2 Cavia porcellus 79 5e-56 215
WERAM-Prc-0042 ENSPCAP00000003902.1 Procavia capensis 80 4e-53 205
WERAM-Vip-0097 ENSVPAP00000009201.1 Vicugna pacos 89 1e-52 203
WERAM-Ere-0139 ENSEEUP00000014406.1 Erinaceus europaeus 84 1e-52 203
WERAM-Ocp-0020 ENSOPRP00000001850.1 Ochotona princeps 83 2e-52 203
WERAM-Mod-0015 ENSMODP00000001738.1 Monodelphis domestica 66 6e-51 198
WERAM-Chh-0057 ENSCHOP00000006505.1 Choloepus hoffmanni 82 7e-51 197
WERAM-Dan-0193 ENSDNOP00000024307.1 Dasypus novemcinctus 67 1e-50 197
WERAM-Ova-0048 ENSOARP00000005820.1 Ovis aries 76 2e-50 196
WERAM-Ect-0019 ENSETEP00000001131.1 Echinops telfairi 70 8e-46 181
WERAM-Ora-0018 ENSOANP00000002597.3 Ornithorhynchus anatinus 66 7e-45 178
WERAM-Sah-0016 ENSSHAP00000001682.1 Sarcophilus harrisii 63 1e-44 177
WERAM-Tas-0107 ENSTSYP00000011045.1 Tarsius syrichta 86 5e-44 175
WERAM-Dio-0066 ENSDORP00000006637.1 Dipodomys ordii 68 1e-43 174
WERAM-Tag-0024 ENSTGUP00000001599.1 Taeniopygia guttata 60 6e-42 168
WERAM-Gaga-0023 ENSGALP00000003813.3 Gallus gallus 71 2e-41 166
WERAM-Anc-0104 ENSACAP00000009875.2 Anolis carolinensis 64 2e-39 159
WERAM-Xet-0114 ENSXETP00000039449.3 Xenopus tropicalis 56 3e-38 156
WERAM-Pes-0139 ENSPSIP00000016587.1 Pelodiscus sinensis 62 3e-38 156
WERAM-Orn-0141 ENSONIP00000014853.1 Oreochromis niloticus 70 8e-37 151
WERAM-Fia-0151 ENSFALP00000012869.1 Ficedula albicollis 61 9e-37 151
WERAM-Xim-0015 ENSXMAP00000001532.1 Xiphophorus maculatus 67 1e-35 147
WERAM-Tar-0006 ENSTRUP00000001767.1 Takifugu rubripes 65 2e-35 146
WERAM-Pof-0089 ENSPFOP00000007795.2 Poecilia formosa 68 4e-35 145
WERAM-Orla-0110 ENSORLP00000013230.1 Oryzias latipes 67 6e-35 145
WERAM-Ten-0115 ENSTNIP00000012783.1 Tetraodon nigroviridis 65 2e-34 143
WERAM-Gaa-0108 ENSGACP00000014003.1 Gasterosteus aculeatus 68 3e-34 142
WERAM-Leo-0107 ENSLOCP00000013933.1 Lepisosteus oculatus 65 6e-32 135
WERAM-Dar-0043 ENSDARP00000017636.5 Danio rerio 65 2e-31 133
WERAM-Asm-0149 ENSAMXP00000014288.1 Astyanax mexicanus 63 2e-30 130
WERAM-Mae-0108 ENSMEUP00000010395.1 Macropus eugenii 58 3e-28 122
WERAM-Gam-0194 ENSGMOP00000018574.1 Gadus morhua 55 7e-28 121
WERAM-Pem-0048 ENSPMAP00000005497.1 Petromyzon marinus 50 6e-22 102
WERAM-Meg-0095 ENSMGAP00000009132.2 Meleagris gallopavo 75 6e-21 98.6
WERAM-Lac-0090 ENSLACP00000011146.1 Latimeria chalumnae 43 2e-20 96.7
WERAM-Anp-0092 ENSAPLP00000010654.1 Anas platyrhynchos 57 5e-20 95.5
WERAM-Cii-0058 ENSCINP00000026142.2 Ciona intestinalis 27 1e-06 50.8
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 54 6e-06 48.9
Created Date 25-Jun-2016