WERAM Information

Tag Content
WERAM ID WERAM-Mum-0038
Ensembl Protein ID ENSMUSP00000022147.8
Gene Name Smn1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000021645.16 ENSMUST00000022147.14 ENSMUSP00000022147.8
ENSMUSG00000021645.16 ENSMUST00000143937.1 ENSMUSP00000119381.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 2.00e-11 45.5 88 138
Organism Mus musculus
Domain Profile
  Me_Reader Tudor
             Tudor.txt   1 nskvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekg 55 
                           ++kvG+++ a ws+dG++Y+++i    ++++ ++e++++ y ++++ ++ +L + 
  ENSMUSP00000022147.8  88 QWKVGDKCSAVWSEDGCIYPATI----TSIDFKRETCVVVYTGYGNREEQNLSDL 138
                           59*********************....********************99988765 PP
Protein Sequence
(Fasta)		MAMGSGGAGS EQEDTVLFRR GTGQSDDSDI WDDTALIKAY DKAVASFKHA LKNGDICETP 60
DKPKGTARRK PAKKNKSQKK NATTPLKQWK VGDKCSAVWS EDGCIYPATI TSIDFKRETC 120
VVVYTGYGNR EEQNLSDLLS PTCEVANSTE QNTQENESQV STDDSEHSSR SLRSKAHSKS 180
KAAPWTSFLP PPPPMPGSGL GPGKPGLKFN GPPPPPPLPP PPFLPCWMPP FPSGPPIIPP 240
PPPISPDCLD DTDALGSMLI SWYMSGYHTG YYMGFRQNKK EGKCSHTN 288
Nucleotide Sequence
(Fasta)		GTCGTCATTG AGTGAGCCCG GCAGCGTCCG TGGTAGCAGG CCATGGCGAT GGGCAGTGGC 60
GGAGCGGGCT CCGAGCAGGA AGATACGGTG CTGTTCCGGC GTGGCACCGG CCAGAGTGAT 120
GATTCTGACA TTTGGGATGA TACAGCATTG ATAAAAGCTT ATGATAAAGC TGTGGCTTCC 180
TTTAAGCATG CTCTAAAGAA CGGTGACATT TGTGAAACTC CAGATAAGCC AAAAGGCACA 240
GCCAGAAGAA AACCTGCCAA GAAGAATAAA AGCCAAAAGA AGAATGCCAC AACTCCCTTG 300
AAACAGTGGA AAGTTGGTGA CAAGTGTTCT GCTGTTTGGT CAGAAGACGG CTGCATTTAC 360
CCAGCTACTA TTACGTCCAT TGACTTTAAG AGAGAAACCT GTGTCGTGGT TTATACTGGA 420
TATGGAAACA GAGAGGAGCA AAACTTATCT GACCTACTTT CCCCGACCTG TGAAGTAGCT 480
AATAGTACAG AACAGAACAC TCAGGAGAAT GAAAGTCAAG TTTCCACAGA CGACAGTGAA 540
CACTCCTCCA GATCGCTCAG AAGTAAAGCA CACAGCAAGT CCAAAGCTGC TCCGTGGACC 600
TCATTTCTTC CTCCACCACC CCCAATGCCA GGGTCAGGAT TAGGACCAGG AAAGCCAGGT 660
CTAAAATTCA ACGGCCCGCC GCCGCCGCCT CCACTACCCC CTCCCCCCTT CCTGCCGTGC 720
TGGATGCCCC CGTTCCCTTC AGGACCACCA ATAATCCCGC CACCCCCTCC CATCTCTCCC 780
GACTGTCTGG ATGACACTGA TGCCCTGGGC AGTATGCTAA TCTCTTGGTA CATGAGTGGC 840
TACCACACTG GCTACTATAT GGGTTTCAGA CAAAATAAAA AAGAAGGAAA GTGCTCACAT 900
ACAAATTAAG AAGTTCAGCT CTGTCTCAGG AGATGGGGTG TCGGTGTCCC TGGTCGACAA 960
GAACAGACGT CTCCTCGTCA TCAGTGGACT CTTGGCTAAG TGGTGTCGTC ATCAGCATCT 1020
CCCCGCTGTG GGAGTCCATC CATCCTAAGT CAGCAGCAGA GCGTGCCTGG GGCGTGAGCA 1080
GTTGGAGGGA CCGACCAGTG GAGTGTGCGT GTCGGAAGGC AGTCTACCCA GTCGTGACTG 1140
AGCACAAATG TGCAATTGTC ATTTTCTTAG CATGTCAAGA TTTTTATTAA TGCCTTTAGA 1200
ATTAAATAAA AGTCCTTTTT TG 1223
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ran-0117 ENSRNOP00000024456.3 Rattus norvegicus 95 2e-93 339
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 81 2e-92 335
WERAM-Nol-0044 ENSNLEP00000005396.1 Nomascus leucogenys 82 4e-91 331
WERAM-Mam-0188 ENSMMUP00000026612.2 Macaca mulatta 85 1e-90 330
WERAM-Hos-0271 ENSP00000483819.1 Homo sapiens 83 1e-89 327
WERAM-Chs-0190 ENSCSAP00000011744.1 Chlorocebus sabaeus 84 1e-89 326
WERAM-Paa-0002 ENSPANP00000011285.1 Papio anubis 79 1e-85 313
WERAM-Poa-0138 ENSPPYP00000017360.2 Pongo abelii 82 3e-80 295
WERAM-Mup-0166 ENSMPUP00000014360.1 Mustela putorius furo 83 3e-78 288
WERAM-Ict-0106 ENSSTOP00000011013.2 Ictidomys tridecemlineatus 85 3e-77 285
WERAM-Tub-0020 ENSTBEP00000002061.1 Tupaia belangeri 82 3e-76 282
WERAM-Caf-0088 ENSCAFP00000011560.3 Canis familiaris 83 2e-75 279
WERAM-Orc-0164 ENSOCUP00000014693.2 Oryctolagus cuniculus 81 4e-75 278
WERAM-Aim-0044 ENSAMEP00000003514.1 Ailuropoda melanoleuca 83 5e-75 278
WERAM-Loa-0042 ENSLAFP00000002850.3 Loxodonta africana 78 9e-75 277
WERAM-Myl-0120 ENSMLUP00000009660.2 Myotis lucifugus 83 1e-74 276
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 83 2e-74 276
WERAM-Tut-0062 ENSTTRP00000004775.1 Tursiops truncatus 82 4e-74 275
WERAM-Fec-0184 ENSFCAP00000019138.1 Felis catus 78 2e-73 273
WERAM-Gog-0039 ENSGGOP00000003799.2 Gorilla gorilla 81 1e-72 270
WERAM-Pat-0137 ENSPTRP00000029048.4 Pan troglodytes 81 3e-72 268
WERAM-Caj-0170 ENSCJAP00000015046.2 Callithrix jacchus 80 1e-71 267
WERAM-Chh-0057 ENSCHOP00000006505.1 Choloepus hoffmanni 71 9e-71 264
WERAM-Bot-0062 ENSBTAP00000007547.5 Bos taurus 76 1e-69 259
WERAM-Cap-0137 ENSCPOP00000011091.2 Cavia porcellus 76 2e-69 259
WERAM-Vip-0097 ENSVPAP00000009201.1 Vicugna pacos 86 2e-66 249
WERAM-Ere-0139 ENSEEUP00000014406.1 Erinaceus europaeus 82 1e-64 243
WERAM-Prc-0042 ENSPCAP00000003902.1 Procavia capensis 79 4e-64 242
WERAM-Ova-0048 ENSOARP00000005820.1 Ovis aries 73 4e-64 241
WERAM-Sus-0126 ENSSSCP00000017979.2 Sus scrofa 78 4e-62 235
WERAM-Tas-0107 ENSTSYP00000011045.1 Tarsius syrichta 70 7e-61 231
WERAM-Ocp-0020 ENSOPRP00000001850.1 Ochotona princeps 77 1e-59 226
WERAM-Ect-0019 ENSETEP00000001131.1 Echinops telfairi 67 4e-59 225
WERAM-Dan-0193 ENSDNOP00000024307.1 Dasypus novemcinctus 67 3e-58 222
WERAM-Otg-0211 ENSOGAP00000018509.1 Otolemur garnettii 67 2e-57 219
WERAM-Mod-0015 ENSMODP00000001738.1 Monodelphis domestica 64 1e-55 214
WERAM-Sah-0016 ENSSHAP00000001682.1 Sarcophilus harrisii 64 2e-50 196
WERAM-Ora-0018 ENSOANP00000002597.3 Ornithorhynchus anatinus 64 2e-50 196
WERAM-Tag-0024 ENSTGUP00000001599.1 Taeniopygia guttata 59 2e-49 193
WERAM-Gaga-0023 ENSGALP00000003813.3 Gallus gallus 66 4e-49 192
WERAM-Dio-0066 ENSDORP00000006637.1 Dipodomys ordii 65 3e-48 189
WERAM-Anc-0104 ENSACAP00000009875.2 Anolis carolinensis 60 3e-46 182
WERAM-Xet-0114 ENSXETP00000039449.3 Xenopus tropicalis 60 4e-44 175
WERAM-Fia-0151 ENSFALP00000012869.1 Ficedula albicollis 62 3e-43 172
WERAM-Pes-0139 ENSPSIP00000016587.1 Pelodiscus sinensis 60 1e-42 171
WERAM-Leo-0107 ENSLOCP00000013933.1 Lepisosteus oculatus 59 1e-41 167
WERAM-Orn-0141 ENSONIP00000014853.1 Oreochromis niloticus 62 2e-40 163
WERAM-Pof-0089 ENSPFOP00000007795.2 Poecilia formosa 57 2e-39 159
WERAM-Xim-0015 ENSXMAP00000001532.1 Xiphophorus maculatus 60 7e-39 158
WERAM-Orla-0110 ENSORLP00000013230.1 Oryzias latipes 57 8e-39 157
WERAM-Gaa-0108 ENSGACP00000014003.1 Gasterosteus aculeatus 56 7e-38 154
WERAM-Tar-0006 ENSTRUP00000001767.1 Takifugu rubripes 53 1e-37 154
WERAM-Ten-0115 ENSTNIP00000012783.1 Tetraodon nigroviridis 52 8e-37 151
WERAM-Dar-0043 ENSDARP00000017636.5 Danio rerio 54 7e-36 148
WERAM-Gam-0194 ENSGMOP00000018574.1 Gadus morhua 49 2e-35 146
WERAM-Asm-0149 ENSAMXP00000014288.1 Astyanax mexicanus 51 9e-34 141
WERAM-Mae-0108 ENSMEUP00000010395.1 Macropus eugenii 59 3e-33 139
WERAM-Pem-0048 ENSPMAP00000005497.1 Petromyzon marinus 48 4e-26 115
WERAM-Meg-0095 ENSMGAP00000009132.2 Meleagris gallopavo 62 2e-23 106
WERAM-Anp-0092 ENSAPLP00000010654.1 Anas platyrhynchos 55 6e-23 105
WERAM-Lac-0090 ENSLACP00000011146.1 Latimeria chalumnae 40 4e-22 102
WERAM-Cii-0058 ENSCINP00000026142.2 Ciona intestinalis 28 2e-09 60.1
WERAM-Cis-0062 ENSCSAVP00000014330.1 Ciona savignyi 32 1e-06 50.8
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 50 2e-06 50.1
WERAM-Cae-0025 C41G7.1a Caenorhabditis elegans 31 7e-06 48.5
Created Date 25-Jun-2016