WERAM Information

Tag Content
WERAM ID WERAM-Leo-0107
Ensembl Protein ID ENSLOCP00000013933.1
Gene Name smn1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLOCG00000011339.1 ENSLOCT00000013962.1 ENSLOCP00000013933.1
ENSLOCG00000011339.1 ENSLOCT00000013967.1 ENSLOCP00000013938.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 9.60e-08 32.3 83 133
Organism Lepisosteus oculatus
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgn 56 
                           +k+G+ ++  ws+dG  Y+++i    ++v+ ++ ++ + y d+++ ++ sL++  
  ENSLOCP00000013933.1  83 WKIGDSCISVWSEDGIAYPATI----KSVDHEKGTCIVVYTDYGNEEEQSLLDLQ 133
                           99********************....*********************88888765 PP
Protein Sequence
(Fasta)		MANGYKEVLF TRGIGQSDDS DIWDDTALIK AYDKAVASFK NALKSEDNTE LPKKGKSPAG 60
KKRKSNKKSK SRKKNNAIPD KEWKIGDSCI SVWSEDGIAY PATIKSVDHE KGTCIVVYTD 120
YGNEEEQSLL DLQSQNSEEE VEMGNAAQEN DPEFSTDDSD RSSTPHLPSQ AKPKARSPPG 180
PPLWNRGFPP PPPPMPGFGM AEPRIDGPAA AFPGWPPLIP GGPPLIPPPP PLGPDFTEDY 240
EALGSMLIAW YMSGYHTGYY LGLKQSQRDS ASGNKSQHK 279
Nucleotide Sequence
(Fasta)		TTAAATTTGA TGTTGAAAGC ACTTTCTATT TAGAAAGTAC TGCAGCAGCG ATTACTAAAC 60
CATGCCTTAC CGTTGTAACT CTGAATAGTG ACCAGTCTGA TTTTCTGTGT GCCGGAGAAC 120
CGGATGATGA ACTCCTGTGG AAACATTCCC GTAGAAATCC AAAATGTTTC TGTGCTTCTA 180
AATAAACGAG ATTGAAACAA AAAGAAAAAA AAAAACATCA TCACCTATAC ATGAAAATCA 240
CAAAAAAAAA GTTTCACACG GAATGTCACG TGAGTTCACT CAACACTGAA AGAGCAACGA 300
TGAAGCAATA TTAAATTCAT AATTTAGTTA TCTGATTGAA GATACTTACC CATCGATGAT 360
ATTTTCGGGT GGATAATTTT CATCGCTTGA AGTTGCTAAA ACAACCTGAG CTCCCGATGA 420
GCTTAATGCT GCATCTATCA TATTAAATAA AAGCAATATA TATATATTAA ATATTTTAAA 480
ATACAAATAA CGCACAATGC GATTTAGCAC GATTTTTTGG GAGGCGGCAA ATTATAATTA 540
ACTGCCTACA ATTGGACTGA CTACTCTTCA CCCTGGTTGT CAAGGGGAAA ACTGACGCAA 600
AGCTTCCCAG GCGTGAGCAG CCAGTGTTTG TCGCAGGTCT ATGACATCAT TTTAAACAAC 660
TGTCGCCCGA AGTGAATTCA CGCTGTTTCC AAATTGTTGT CTGCAGGTCT GTGTTTAAAC 720
GTGTGTTTAT TCATGGCAAA TGGATATAAA GAAGTACTAT TTACACGAGG CATTGGACAA 780
AGTGATGATT CTGATATCTG GGATGATACA GCGTTAATAA AGGCATATGA CAAGGCTGTG 840
GCATCCTTTA AGAATGCCTT GAAGAGTGAG GATAACACTG AGTTACCTAA AAAAGGAAAA 900
TCACCAGCTG GAAAGAAGCG TAAAAGCAAC AAGAAGAGCA AAAGCCGAAA GAAAAACAAC 960
GCTATCCCAG ACAAGGAGTG GAAGATTGGG GATTCCTGCA TTTCTGTTTG GTCAGAAGAT 1020
GGCATTGCCT ATCCAGCTAC TATTAAATCT GTAGACCATG AGAAAGGCAC TTGTATTGTT 1080
GTTTACACTG ATTATGGGAA TGAGGAGGAG CAGAGCCTAT TGGACCTTCA GTCTCAGAAT 1140
TCTGAGGAAG AGGTTGAAAT GGGAAATGCT GCCCAGGAGA ATGATCCTGA GTTTTCAACT 1200
GATGACAGTG ACAGGTCGTC CACCCCGCAC CTGCCCAGTC AGGCTAAGCC CAAAGCCAGA 1260
TCTCCTCCAG GACCCCCTCT GTGGAATCGT GGTTTTCCCC CTCCCCCACC GCCAATGCCA 1320
GGGTTTGGCA TGGCTGAACC AAGAATTGAT GGACCTGCTG CTGCCTTCCC TGGCTGGCCT 1380
CCATTAATTC CAGGTGGACC TCCGCTGATC CCCCCTCCAC CTCCATTGGG TCCAGACTTC 1440
ACAGAAGATT ATGAAGCCTT GGGCAGCATG CTAATCGCAT GGTACATGAG CGGATACCAC 1500
ACGGGCTATT ATCTAGGACT AAAGCAGAGC CAAAGGGATT CTGCTTCAGG AAATAAGTCC 1560
CAGCACAAAT GAGCAGTGCG GGTCTGGTCT TTGCCAGAAA ATATGTGGAC ATCTCTCCCA 1620
GGGAGAGCAG TGAAACCTTC AGCAACTGCC GCTACCATTT TTTTTTTAAC CATGGAGTTT 1680
GTATTTGTTG TAAATAAAAG AAAAATGAAA AAACAATGTT TGTGCTTATG TGTATGGGGG 1740
GGAAATGTTA AGAAAT 1757
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Dar-0043 ENSDARP00000017636.5 Danio rerio 59 2e-59 226
WERAM-Orn-0141 ENSONIP00000014853.1 Oreochromis niloticus 52 2e-54 209
WERAM-Asm-0149 ENSAMXP00000014288.1 Astyanax mexicanus 60 3e-51 199
WERAM-Ten-0115 ENSTNIP00000012783.1 Tetraodon nigroviridis 49 4e-50 195
WERAM-Xet-0114 ENSXETP00000039449.3 Xenopus tropicalis 55 9e-50 194
WERAM-Ora-0018 ENSOANP00000002597.3 Ornithorhynchus anatinus 56 2e-49 192
WERAM-Mod-0015 ENSMODP00000001738.1 Monodelphis domestica 52 7e-49 191
WERAM-Orc-0164 ENSOCUP00000014693.2 Oryctolagus cuniculus 53 2e-47 186
WERAM-Tar-0006 ENSTRUP00000001767.1 Takifugu rubripes 50 5e-47 185
WERAM-Tag-0024 ENSTGUP00000001599.1 Taeniopygia guttata 52 1e-46 184
WERAM-Fia-0151 ENSFALP00000012869.1 Ficedula albicollis 54 3e-45 179
WERAM-Sah-0016 ENSSHAP00000001682.1 Sarcophilus harrisii 51 8e-45 177
WERAM-Gaa-0108 ENSGACP00000014003.1 Gasterosteus aculeatus 63 4e-44 175
WERAM-Gam-0194 ENSGMOP00000018574.1 Gadus morhua 49 9e-44 174
WERAM-Pof-0089 ENSPFOP00000007795.2 Poecilia formosa 66 5e-43 171
WERAM-Orla-0110 ENSORLP00000013230.1 Oryzias latipes 62 2e-42 169
WERAM-Xim-0015 ENSXMAP00000001532.1 Xiphophorus maculatus 62 1e-41 167
WERAM-Gaga-0023 ENSGALP00000003813.3 Gallus gallus 57 2e-40 163
WERAM-Ere-0139 ENSEEUP00000014406.1 Erinaceus europaeus 50 3e-39 159
WERAM-Anc-0104 ENSACAP00000009875.2 Anolis carolinensis 59 6e-39 158
WERAM-Mum-0038 ENSMUSP00000022147.8 Mus musculus 57 1e-38 157
WERAM-Tub-0020 ENSTBEP00000002061.1 Tupaia belangeri 59 2e-38 156
WERAM-Paa-0095 ENSPANP00000003940.1 Papio anubis 60 3e-38 156
WERAM-Prc-0042 ENSPCAP00000003902.1 Procavia capensis 47 3e-38 155
WERAM-Tut-0062 ENSTTRP00000004775.1 Tursiops truncatus 52 4e-38 155
WERAM-Mam-0188 ENSMMUP00000026612.2 Macaca mulatta 61 4e-38 155
WERAM-Ran-0117 ENSRNOP00000024456.3 Rattus norvegicus 57 4e-38 155
WERAM-Caj-0170 ENSCJAP00000015046.2 Callithrix jacchus 57 6e-38 155
WERAM-Ict-0106 ENSSTOP00000011013.2 Ictidomys tridecemlineatus 57 9e-38 154
WERAM-Bot-0062 ENSBTAP00000007547.5 Bos taurus 53 1e-37 154
WERAM-Aim-0044 ENSAMEP00000003514.1 Ailuropoda melanoleuca 55 1e-37 154
WERAM-Chs-0190 ENSCSAP00000011744.1 Chlorocebus sabaeus 61 1e-37 154
WERAM-Mup-0166 ENSMPUP00000014360.1 Mustela putorius furo 56 2e-37 153
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 55 3e-37 152
WERAM-Caf-0088 ENSCAFP00000011560.3 Canis familiaris 54 4e-37 152
WERAM-Myl-0120 ENSMLUP00000009660.2 Myotis lucifugus 58 5e-37 151
WERAM-Nol-0044 ENSNLEP00000005396.1 Nomascus leucogenys 52 6e-37 151
WERAM-Gog-0217 ENSGGOP00000017774.1 Gorilla gorilla 53 1e-36 150
WERAM-Pat-0137 ENSPTRP00000029048.4 Pan troglodytes 53 1e-36 150
WERAM-Hos-0271 ENSP00000483819.1 Homo sapiens 53 1e-36 150
WERAM-Fec-0184 ENSFCAP00000019138.1 Felis catus 54 2e-36 149
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 59 3e-36 149
WERAM-Cap-0137 ENSCPOP00000011091.2 Cavia porcellus 59 3e-36 149
WERAM-Loa-0042 ENSLAFP00000002850.3 Loxodonta africana 54 2e-35 146
WERAM-Ova-0048 ENSOARP00000005820.1 Ovis aries 50 3e-35 145
WERAM-Vip-0097 ENSVPAP00000009201.1 Vicugna pacos 61 2e-34 143
WERAM-Sus-0126 ENSSSCP00000017979.2 Sus scrofa 53 3e-34 142
WERAM-Pes-0139 ENSPSIP00000016587.1 Pelodiscus sinensis 59 9e-34 141
WERAM-Ocp-0020 ENSOPRP00000001850.1 Ochotona princeps 58 7e-33 138
WERAM-Otg-0211 ENSOGAP00000018509.1 Otolemur garnettii 52 3e-32 136
WERAM-Poa-0138 ENSPPYP00000017360.2 Pongo abelii 49 4e-32 135
WERAM-Chh-0057 ENSCHOP00000006505.1 Choloepus hoffmanni 57 1e-30 130
WERAM-Dio-0066 ENSDORP00000006637.1 Dipodomys ordii 51 7e-30 128
WERAM-Dan-0060 ENSDNOP00000005641.3 Dasypus novemcinctus 46 4e-29 125
WERAM-Mae-0108 ENSMEUP00000010395.1 Macropus eugenii 50 5e-28 122
WERAM-Anp-0092 ENSAPLP00000010654.1 Anas platyrhynchos 47 7e-28 121
WERAM-Ect-0019 ENSETEP00000001131.1 Echinops telfairi 45 4e-25 112
WERAM-Pem-0048 ENSPMAP00000005497.1 Petromyzon marinus 47 2e-24 109
WERAM-Tas-0107 ENSTSYP00000011045.1 Tarsius syrichta 50 2e-21 100
WERAM-Lac-0090 ENSLACP00000011146.1 Latimeria chalumnae 44 5e-20 95.5
WERAM-Meg-0095 ENSMGAP00000009132.2 Meleagris gallopavo 48 5e-18 89.0
WERAM-Cii-0058 ENSCINP00000026142.2 Ciona intestinalis 29 2e-08 56.6
WERAM-Soa-0056 ENSSARP00000005482.1 Sorex araneus 42 1e-07 54.3
WERAM-Cis-0062 ENSCSAVP00000014330.1 Ciona savignyi 31 5e-06 48.9
Created Date 25-Jun-2016