WERAM Information

Tag Content
WERAM ID WERAM-Dar-0043
Ensembl Protein ID ENSDARP00000017636.5
Gene Name smn1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000018494.6 ENSDART00000028099.6 ENSDARP00000017636.5
ENSDARG00000018494.6 ENSDART00000127956.1 ENSDARP00000105995.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 1.00e-06 30 81 128
Organism Danio rerio
Domain Profile
  Me_Reader Tudor
             Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLe 53 
                           + vG+ + a ws+dG  Y ++i    ++v+ ++ ++++ y d+++ ++ +L 
  ENSDARP00000017636.5  81 WQVGDSCYAFWSEDGNLYTATI----TSVDQEKGTCVVFYTDYGNEEEQNLS 128
                           89********************....*****************998877775 PP
Protein Sequence
(Fasta)		MANGAEDVVF CRGTGQSDDS DIWDDTALIK AYDKAVASFK NALKGEDGAT PQENDNPGKK 60
RKNNKKNKSR KRCNAAPDKE WQVGDSCYAF WSEDGNLYTA TITSVDQEKG TCVVFYTDYG 120
NEEEQNLSDL LTEPPDMDED ALKTANVKET ESSTEESDRS FTPQKSGHAK HKSKSNFPMG 180
PPSWFPSFPP GPPPPPPHFK KMDGRRGEGP GPSFPGWPPM IPLGPPMIPP PPPMSPDFGE 240
DDEALGSMLI SWYMSGYHTG YYMGLRQGRK EAAASKKSHR K 281
Nucleotide Sequence
(Fasta)		CATCAGCAGC TGCGTTCATC AGAGTGGCGC ACGTTGGACT TGGGAAATAT TTAAAATTTT 60
CATACATCCC CATGGCCAAT GGTGCAGAAG ATGTCGTATT TTGTCGTGGG ACTGGTCAAA 120
GTGATGATTC TGACATTTGG GATGATACAG CTTTGATTAA AGCATACGAT AAAGCTGTTG 180
CATCATTCAA GAATGCTTTG AAAGGTGAGG ATGGGGCGAC CCCACAAGAA AACGACAACC 240
CAGGGAAGAA GAGGAAAAAC AACAAAAAGA ATAAGAGCAG GAAGAGATGC AACGCAGCAC 300
CGGATAAAGA GTGGCAGGTT GGAGACTCCT GTTATGCGTT CTGGTCTGAA GATGGCAACC 360
TGTACACTGC CACCATTACC TCAGTCGACC AGGAGAAGGG CACCTGTGTG GTCTTTTACA 420
CAGATTATGG AAATGAGGAG GAGCAGAACC TCAGTGACCT TCTGACTGAG CCTCCAGACA 480
TGGATGAAGA TGCTCTGAAG ACAGCAAATG TCAAAGAAAC AGAGTCCTCC ACAGAAGAGA 540
GTGATCGCTC TTTCACCCCA CAGAAGTCCG GTCATGCAAA GCACAAATCT AAAAGCAATT 600
TTCCTATGGG ACCCCCATCA TGGTTTCCCA GTTTCCCACC TGGACCGCCA CCACCACCAC 660
CCCACTTTAA AAAGATGGAT GGCAGACGAG GAGAAGGTCC TGGTCCTTCC TTTCCTGGAT 720
GGCCTCCCAT GATTCCACTC GGTCCACCGA TGATCCCACC ACCGCCACCT ATGAGTCCAG 780
ACTTTGGGGA GGACGACGAG GCTTTGGGCA GTATGCTGAT TTCCTGGTAT ATGAGCGGCT 840
ATCACACTGG ATACTATATG GGTTTAAGAC AGGGCCGTAA AGAGGCTGCT GCATCCAAGA 900
AATCGCATCG GAAATAAAAA CCCAACGAGT GGGATATGAA CGGGATGCTG CTGGAGACAT 960
AATTGTTCTT TTTTGTATCG TTTGTAAATA AATTAAAAGT AATTGTTCTC TTTTCAAAA 1020
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Asm-0149 ENSAMXP00000014288.1 Astyanax mexicanus 68 3e-73 272
WERAM-Pof-0089 ENSPFOP00000007795.2 Poecilia formosa 60 1e-65 247
WERAM-Xim-0015 ENSXMAP00000001532.1 Xiphophorus maculatus 60 2e-65 246
WERAM-Orn-0141 ENSONIP00000014853.1 Oreochromis niloticus 59 5e-64 241
WERAM-Gaa-0108 ENSGACP00000014003.1 Gasterosteus aculeatus 63 9e-62 234
WERAM-Gam-0194 ENSGMOP00000018574.1 Gadus morhua 56 2e-59 226
WERAM-Ten-0115 ENSTNIP00000012783.1 Tetraodon nigroviridis 59 3e-58 222
WERAM-Leo-0107 ENSLOCP00000013933.1 Lepisosteus oculatus 58 6e-58 221
WERAM-Tag-0024 ENSTGUP00000001599.1 Taeniopygia guttata 49 5e-47 185
WERAM-Ora-0018 ENSOANP00000002597.3 Ornithorhynchus anatinus 53 5e-47 185
WERAM-Pes-0139 ENSPSIP00000016587.1 Pelodiscus sinensis 52 2e-46 183
WERAM-Mod-0015 ENSMODP00000001738.1 Monodelphis domestica 54 2e-46 182
WERAM-Orla-0110 ENSORLP00000013230.1 Oryzias latipes 68 6e-46 181
WERAM-Sah-0016 ENSSHAP00000001682.1 Sarcophilus harrisii 52 9e-43 171
WERAM-Tar-0006 ENSTRUP00000001767.1 Takifugu rubripes 69 2e-42 169
WERAM-Gaga-0023 ENSGALP00000003813.3 Gallus gallus 66 2e-38 156
WERAM-Fia-0151 ENSFALP00000012869.1 Ficedula albicollis 67 4e-36 149
WERAM-Xet-0114 ENSXETP00000039449.3 Xenopus tropicalis 64 5e-36 148
WERAM-Anc-0104 ENSACAP00000009875.2 Anolis carolinensis 69 9e-36 147
WERAM-Paa-0095 ENSPANP00000003940.1 Papio anubis 66 5e-35 145
WERAM-Tut-0062 ENSTTRP00000004775.1 Tursiops truncatus 65 1e-34 144
WERAM-Caj-0170 ENSCJAP00000015046.2 Callithrix jacchus 66 1e-34 144
WERAM-Mam-0188 ENSMMUP00000026612.2 Macaca mulatta 67 1e-34 144
WERAM-Mum-0038 ENSMUSP00000022147.8 Mus musculus 64 2e-34 143
WERAM-Aim-0044 ENSAMEP00000003514.1 Ailuropoda melanoleuca 61 2e-34 143
WERAM-Bot-0062 ENSBTAP00000007547.5 Bos taurus 60 2e-34 143
WERAM-Loa-0042 ENSLAFP00000002850.3 Loxodonta africana 66 2e-34 143
WERAM-Chs-0190 ENSCSAP00000011744.1 Chlorocebus sabaeus 67 3e-34 142
WERAM-Ran-0117 ENSRNOP00000024456.3 Rattus norvegicus 65 4e-34 142
WERAM-Cap-0137 ENSCPOP00000011091.2 Cavia porcellus 64 5e-34 141
WERAM-Mup-0166 ENSMPUP00000014360.1 Mustela putorius furo 60 6e-34 141
WERAM-Ict-0106 ENSSTOP00000011013.2 Ictidomys tridecemlineatus 64 1e-33 140
WERAM-Anp-0092 ENSAPLP00000010654.1 Anas platyrhynchos 50 1e-33 140
WERAM-Tub-0020 ENSTBEP00000002061.1 Tupaia belangeri 61 2e-33 140
WERAM-Myl-0120 ENSMLUP00000009660.2 Myotis lucifugus 61 2e-33 140
WERAM-Eqc-0118 ENSECAP00000013134.1 Equus caballus 64 2e-33 140
WERAM-Fec-0184 ENSFCAP00000019138.1 Felis catus 59 2e-33 139
WERAM-Nol-0044 ENSNLEP00000005396.1 Nomascus leucogenys 64 4e-33 139
WERAM-Gog-0039 ENSGGOP00000003799.2 Gorilla gorilla 65 5e-33 138
WERAM-Pat-0137 ENSPTRP00000029048.4 Pan troglodytes 65 5e-33 138
WERAM-Hos-0271 ENSP00000483819.1 Homo sapiens 65 5e-33 138
WERAM-Ptv-0052 ENSPVAP00000005647.1 Pteropus vampyrus 56 6e-33 138
WERAM-Sus-0126 ENSSSCP00000017979.2 Sus scrofa 64 7e-33 138
WERAM-Caf-0088 ENSCAFP00000011560.3 Canis familiaris 58 1e-32 137
WERAM-Orc-0164 ENSOCUP00000014693.2 Oryctolagus cuniculus 63 2e-32 136
WERAM-Vip-0097 ENSVPAP00000009201.1 Vicugna pacos 64 2e-32 136
WERAM-Ova-0048 ENSOARP00000005820.1 Ovis aries 53 5e-32 135
WERAM-Ere-0139 ENSEEUP00000014406.1 Erinaceus europaeus 65 2e-30 129
WERAM-Ocp-0020 ENSOPRP00000001850.1 Ochotona princeps 65 5e-30 128
WERAM-Dio-0066 ENSDORP00000006637.1 Dipodomys ordii 52 1e-29 127
WERAM-Poa-0138 ENSPPYP00000017360.2 Pongo abelii 63 8e-29 124
WERAM-Dan-0193 ENSDNOP00000024307.1 Dasypus novemcinctus 56 1e-28 124
WERAM-Prc-0042 ENSPCAP00000003902.1 Procavia capensis 64 2e-28 123
WERAM-Chh-0057 ENSCHOP00000006505.1 Choloepus hoffmanni 58 3e-28 122
WERAM-Otg-0211 ENSOGAP00000018509.1 Otolemur garnettii 44 8e-28 121
WERAM-Ect-0019 ENSETEP00000001131.1 Echinops telfairi 57 5e-25 112
WERAM-Mae-0108 ENSMEUP00000010395.1 Macropus eugenii 50 6e-25 111
WERAM-Pem-0048 ENSPMAP00000005497.1 Petromyzon marinus 50 2e-22 103
WERAM-Lac-0090 ENSLACP00000011146.1 Latimeria chalumnae 43 3e-21 99.4
WERAM-Meg-0095 ENSMGAP00000009132.2 Meleagris gallopavo 68 1e-17 87.8
WERAM-Tas-0107 ENSTSYP00000011045.1 Tarsius syrichta 64 5e-17 85.5
WERAM-Cii-0058 ENSCINP00000026142.2 Ciona intestinalis 29 2e-08 56.6
WERAM-Drm-0058 FBpp0075441 Drosophila melanogaster 49 9e-07 51.2
Created Date 25-Jun-2016