Tag |
Content |
WERAM ID |
WERAM-Caj-0047 |
Ensembl Protein ID |
ENSCJAP00000007669.2 |
Gene Name |
HDAC8 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
1.30e-100 |
338.1 |
17 |
245 |
|
Organism |
Callithrix jacchus |
Domain Profile |
HDAC Class-I
class-1.txt 4 ayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92 +y+y+++ +++++++ +++pkr+s++h+L+ +y+l+k++++vkpk as+ee+++fh+++y+++l+kv++e +++++ ++ ++++g+dc ENSCJAP00000007669.2 17 VYIYSPE--YVSVCDSLAKIPKRASMVHSLIEAYALHKQMRVVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHP-DSIEYGLGYDC 102 6888888..7899**************************************************************99.6789******* PP class-1.txt 93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyt 181 P ++g+f+y+++++Ga+++aa++L+++++++ainw+GG+hhakk+easGfcy+nD vl+il+l++k++r+ly+d+dlhhGDgve+af++ ENSCJAP00000007669.2 103 PATEGIFDYAAAVGGATITAAQCLIDGMSKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSF 191 ***************************************************************************************** PP class-1.txt 182 tdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifk 235 t++vmtvs+hk++++ffPgtGd+sdvg +kg+yy+vnvP++dgi+De+y++i++ ENSCJAP00000007669.2 192 TSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICE 245 ****************************************************97 PP
|
Protein Sequence (Fasta) | MEEPEEPEDS GQSLVPVYIY SPEYVSVCDS LAKIPKRASM VHSLIEAYAL HKQMRVVKPK 60 VASMEEMATF HTDAYLQHLQ KVSQEGDDDH PDSIEYGLGY DCPATEGIFD YAAAVGGATI 120 TAAQCLIDGM SKVAINWSGG WHHAKKDEAS GFCYLNDAVL GILRLRRKFE RILYVDLDLH 180 HGDGVEDAFS FTSKVMTVSL HKFSPGFFPG TGDVSDVGLG KGRYYSVNVP IQDGIQDEKY 240 YQICERHKPD APNPGL 256Protein Fasta Sequence
>ENSCJAP00000007669.2|Class-I|Callithrix jacchus MEEPEEPEDSGQSLVPVYIYSPEYVSVCDSLAKIPKRASMVHSLIEAYALHKQMRVVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMSKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICERHKPDAPNPGL
|
Nucleotide Sequence (Fasta) | AAATGGCCCC GTAGGGCAAC AAGGATGGTT AGTTTTGACC CTACTTATTT GTGCCATAAA 60 TCGATCCTAA TTGACAGCTC TTTGGACTTT TATATCTGCC GAACACTTTT TCTTGAACTG 120 TGGTCACTAA ATGAGGGGGG TCTGGCCTGG GAAGTCCCAT CCATTCCTTC AATTGGATGG 180 GGAGCGGGGA TAGTGTCTCC GGCAATCTGA AGAATAGGAG GGAATGTTGA CCAGGGAACA 240 CCAATGCGGC CGATCAGAGG AGCAGGAACT AGAGCCCTGG CCGAGTCCGA AAAAAGCCAG 300 ATCTGGACGG TGGCTGCGGA ACGGTTGTAA GTGGAAGATG GAAGAGCCGG AGGAACCGGA 360 GGATAGTGGG CAGTCCCTGG TCCCGGTTTA TATCTATAGT CCCGAGTATG TCAGTGTGTG 420 TGATTCCCTG GCCAAGATCC CCAAACGGGC CAGTATGGTA CATTCTTTGA TTGAAGCATA 480 TGCACTGCAT AAGCAAATGA GGGTGGTTAA GCCCAAAGTG GCCTCCATGG AGGAGATGGC 540 CACTTTCCAC ACTGATGCTT ATCTGCAGCA TCTCCAGAAG GTCAGCCAAG AGGGTGATGA 600 TGATCATCCG GACTCCATAG AATATGGGCT AGGTTATGAC TGCCCAGCCA CTGAAGGGAT 660 ATTTGACTAT GCAGCAGCTG TAGGAGGAGC TACAATCACA GCTGCGCAGT GCCTGATTGA 720 TGGAATGTCC AAAGTAGCAA TTAACTGGTC TGGAGGGTGG CATCATGCAA AGAAAGATGA 780 AGCATCTGGT TTTTGTTATC TCAATGATGC TGTCCTGGGA ATATTACGAT TGCGACGGAA 840 ATTTGAGCGT ATTCTCTATG TGGATTTGGA TCTGCACCAT GGAGATGGTG TAGAAGATGC 900 CTTCAGTTTC ACTTCCAAAG TCATGACGGT GTCCTTGCAC AAATTCTCCC CGGGATTTTT 960 CCCAGGAACA GGTGATGTGT CTGATGTTGG CCTGGGGAAG GGACGGTACT ACAGTGTAAA 1020 TGTGCCCATT CAGGATGGCA TACAAGATGA AAAATATTAT CAGATCTGTG AAAGGCACAA 1080 ACCCGATGCC CCAAATCCAG GCCTGTAGAA GCTAGCTGCT GCAGCTTCTC TTCCTCATTT 1140 GCATAACCTT GTCTGAAAAC TATACTAGTG AATACTGAAG GATCAGGTTT CTCATCAAGA 1200 AAACTGCATT TTAAATAAAT ATCTTGTGTG TTTATAGGGA AGTTACCAAT GTAGTGTAAT 1260 GAGATGCCTG TCCTCCCCCT CCTTTCTGGA TAAGAGATTT TATACTTTCA CAAAAGGAAA 1320 AATTAATGAT TTGCAGTGTA ACAAACACTA CTGTTACAGT GGTTAGGGAA ACTTTCCCAA 1380 AAGCAATCTG GAGTGGCACT TCGTTCATTT ATTCATTTAA TGACTATTTA TTGAATGTCT 1440 ACTATGTATA AAGTATTGAT TCTACCTTCA AGGAAGTTAG TGGAAATTTT AAAATGTTAG 1500 ATAAATAAAT AGAGATTGAT TTTCATATTC ATACACATTT GAATAAATAA AACATGGAAA 1560 ATTATAAGAA CCATGAGAGA TAGAATGCTG TGGGTATTGA AAGAGAGAAA ATATTTCAGA 1620 AAAAGGCGTA ATTGAGGAGG TTACATTTGA TCCGGTTTCT AAAGGGTAGC TAATTACTCT 1680 ATCTTTACAA AGTGTGTGAA TGTATATGTG TGTTTATAAA ATCTGGGTCA AGTTTGAATA 1740 TACAGAGATT GTAGGGAAGG ATGTTCTACA CACATGGTAC AGCAAGATCA AAGTTGGGAG 1800 AGGCTGAGCT ATGTACAAAT AATAGCAGTG GTTTTAGTTT GGCTGGACCG TAAAGTGCAT 1860 GAGGGAGAAG TTGCAAAGAA GATTGAAAAC GTGGGTGGGA ACCACATCAT GGAAGAGCTG 1920 GAATTCTTAG CTATGAAAAT TTGTACCATA TTCTGTAAAC ATTTTGGGAG ACACTGAAGG 1980 TTTTAGAATG AGGGAATTGT AAGATCAAAA GCTTGCTTGG GAAGATTAAC ACCCTTCCCA 2040 GTAAAGTTTG GCAACAGCGT CTGCTGTTAT ATTGAAATAA TGTGGGTAAA GTGGCTGACA 2100 CAGTATCTGA TGCATAGTAG CTCGGTAAGT CATGGAAGCA GATATATTGT AGTGGTTTAG 2160 AGCAAAAACT CTGGTGCCTG GATGCCTGGG TTCAAAAACA AGCTCTGCCA CTTAATAGCT 2220 GTATGATTTT GTACAGATTT CTTAACCACT CTGTATGGTA GTTTCCCCAT CTGTAAATTA 2280 GGATTAAAAA TATGTTATGA AATTATAAGG GTCAAATGCG TTAATGCATG TAAAATATAT 2340 AGAACAGTGC ACTATTCTGA ATAAACTGCT CAATAAATGT T
2382Nucleotide Fasta Sequence
>ENSCJAP00000007669.2|Class-I|Callithrix jacchus AAATGGCCCCGTAGGGCAACAAGGATGGTTAGTTTTGACCCTACTTATTTGTGCCATAAATCGATCCTAATTGACAGCTCTTTGGACTTTTATATCTGCCGAACACTTTTTCTTGAACTGTGGTCACTAAATGAGGGGGGTCTGGCCTGGGAAGTCCCATCCATTCCTTCAATTGGATGGGGAGCGGGGATAGTGTCTCCGGCAATCTGAAGAATAGGAGGGAATGTTGACCAGGGAACACCAATGCGGCCGATCAGAGGAGCAGGAACTAGAGCCCTGGCCGAGTCCGAAAAAAGCCAGATCTGGACGGTGGCTGCGGAACGGTTGTAAGTGGAAGATGGAAGAGCCGGAGGAACCGGAGGATAGTGGGCAGTCCCTGGTCCCGGTTTATATCTATAGTCCCGAGTATGTCAGTGTGTGTGATTCCCTGGCCAAGATCCCCAAACGGGCCAGTATGGTACATTCTTTGATTGAAGCATATGCACTGCATAAGCAAATGAGGGTGGTTAAGCCCAAAGTGGCCTCCATGGAGGAGATGGCCACTTTCCACACTGATGCTTATCTGCAGCATCTCCAGAAGGTCAGCCAAGAGGGTGATGATGATCATCCGGACTCCATAGAATATGGGCTAGGTTATGACTGCCCAGCCACTGAAGGGATATTTGACTATGCAGCAGCTGTAGGAGGAGCTACAATCACAGCTGCGCAGTGCCTGATTGATGGAATGTCCAAAGTAGCAATTAACTGGTCTGGAGGGTGGCATCATGCAAAGAAAGATGAAGCATCTGGTTTTTGTTATCTCAATGATGCTGTCCTGGGAATATTACGATTGCGACGGAAATTTGAGCGTATTCTCTATGTGGATTTGGATCTGCACCATGGAGATGGTGTAGAAGATGCCTTCAGTTTCACTTCCAAAGTCATGACGGTGTCCTTGCACAAATTCTCCCCGGGATTTTTCCCAGGAACAGGTGATGTGTCTGATGTTGGCCTGGGGAAGGGACGGTACTACAGTGTAAATGTGCCCATTCAGGATGGCATACAAGATGAAAAATATTATCAGATCTGTGAAAGGCACAAACCCGATGCCCCAAATCCAGGCCTGTAGAAGCTAGCTGCTGCAGCTTCTCTTCCTCATTTGCATAACCTTGTCTGAAAACTATACTAGTGAATACTGAAGGATCAGGTTTCTCATCAAGAAAACTGCATTTTAAATAAATATCTTGTGTGTTTATAGGGAAGTTACCAATGTAGTGTAATGAGATGCCTGTCCTCCCCCTCCTTTCTGGATAAGAGATTTTATACTTTCACAAAAGGAAAAATTAATGATTTGCAGTGTAACAAACACTACTGTTACAGTGGTTAGGGAAACTTTCCCAAAAGCAATCTGGAGTGGCACTTCGTTCATTTATTCATTTAATGACTATTTATTGAATGTCTACTATGTATAAAGTATTGATTCTACCTTCAAGGAAGTTAGTGGAAATTTTAAAATGTTAGATAAATAAATAGAGATTGATTTTCATATTCATACACATTTGAATAAATAAAACATGGAAAATTATAAGAACCATGAGAGATAGAATGCTGTGGGTATTGAAAGAGAGAAAATATTTCAGAAAAAGGCGTAATTGAGGAGGTTACATTTGATCCGGTTTCTAAAGGGTAGCTAATTACTCTATCTTTACAAAGTGTGTGAATGTATATGTGTGTTTATAAAATCTGGGTCAAGTTTGAATATACAGAGATTGTAGGGAAGGATGTTCTACACACATGGTACAGCAAGATCAAAGTTGGGAGAGGCTGAGCTATGTACAAATAATAGCAGTGGTTTTAGTTTGGCTGGACCGTAAAGTGCATGAGGGAGAAGTTGCAAAGAAGATTGAAAACGTGGGTGGGAACCACATCATGGAAGAGCTGGAATTCTTAGCTATGAAAATTTGTACCATATTCTGTAAACATTTTGGGAGACACTGAAGGTTTTAGAATGAGGGAATTGTAAGATCAAAAGCTTGCTTGGGAAGATTAACACCCTTCCCAGTAAAGTTTGGCAACAGCGTCTGCTGTTATATTGAAATAATGTGGGTAAAGTGGCTGACACAGTATCTGATGCATAGTAGCTCGGTAAGTCATGGAAGCAGATATATTGTAGTGGTTTAGAGCAAAAACTCTGGTGCCTGGATGCCTGGGTTCAAAAACAAGCTCTGCCACTTAATAGCTGTATGATTTTGTACAGATTTCTTAACCACTCTGTATGGTAGTTTCCCCATCTGTAAATTAGGATTAAAAATATGTTATGAAATTATAAGGGTCAAATGCGTTAATGCATGTAAAATATATAGAACAGTGCACTATTCTGAATAAACTGCTCAATAAATGTT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |