WERAM Information

Tag Content
WERAM ID WERAM-Brr-0134
Ensembl Protein ID Bra026825.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra026825 Bra026825.1 Bra026825.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.50e-11 44.1 190 236
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    +C +Cg+++++  ++++Cd C++wfH+kCvk++  +++  k++ Cp+C 
  Bra026825.1-P 190 VCGACGDNHDD--FWICCDACEKWFHGKCVKITPAKAEHIKHYKCPTCS 236
                    8****555555..8*******************555554479******6 PP
Protein Sequence
(Fasta)		MEGIQNPVVS RSVEEVFGDF RGRRAGLLKA LSTDVRKFYH ECDPDKENLC LYGLPNETWE 60
VNLPVDEVPP ELPEPALGIN FARDGMPEKD WISLVAVHSD SWLISVAFYF GARFGFGKNE 120
RKRLFQMIND LPTIFEVITG NAKQTKDQSA NNHNSSRTKP SGVKASKTSP PPREDDDSGD 180
DEEDDEQGAV CGACGDNHDD FWICCDACEK WFHGKCVKIT PAKAEHIKHY KCPTCSINKK 240
IKAS 244
Nucleotide Sequence
(Fasta)		ATGGAGGGAA TACAGAATCC TGTTGTATCG CGCAGTGTCG AAGAGGTCTT TGGCGACTTT 60
AGGGGTCGAA GAGCTGGTCT CCTCAAGGCT CTCTCTACAG ATGTACGGAA GTTTTACCAC 120
GAGTGTGACC CTGACAAGGA AAACTTGTGT CTTTATGGAC TTCCAAATGA GACATGGGAA 180
GTGAATCTTC CCGTCGACGA GGTCCCTCCC GAGCTCCCTG AACCAGCTCT AGGCATCAAC 240
TTTGCAAGGG ACGGAATGCC TGAAAAAGAC TGGATATCTC TTGTTGCTGT TCACAGTGAC 300
TCATGGCTCA TCTCTGTTGC CTTCTACTTT GGCGCACGTT TCGGATTTGG GAAGAATGAG 360
AGGAAGAGGC TCTTCCAGAT GATAAACGAT CTCCCAACCA TCTTCGAGGT TATAACTGGC 420
AACGCAAAGC AAACCAAGGA TCAGTCTGCT AACAACCACA ACAGTAGCAG AACCAAGCCT 480
AGTGGTGTCA AGGCTTCAAA GACGTCTCCA CCACCAAGAG AAGATGATGA CAGTGGAGAT 540
GATGAGGAAG ACGATGAACA AGGTGCGGTC TGTGGTGCCT GTGGAGACAA CCATGATGAT 600
TTCTGGATAT GTTGCGATGC TTGTGAGAAA TGGTTCCATG GAAAATGCGT GAAGATCACA 660
CCTGCAAAGG CTGAGCACAT CAAACATTAC AAATGCCCTA CTTGCAGTAT CAACAAGAAA 720
ATCAAAGCTT CATAA 736
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 82 3e-101 364
WERAM-Arl-0043 fgenesh2_kg.1__ 1579__ AT1G14510.1 Arabidopsis lyrata 83 5e-101 364
WERAM-Bro-0146 Bo8g066080.1 Brassica oleracea 84 1e-99 359
WERAM-Glm-0084 GLYMA07G40165.1 Glycine max 74 2e-91 332
WERAM-Prp-0081 EMJ24886 Prunus persica 76 2e-90 329
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 73 4e-90 328
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 73 7e-88 320
WERAM-Met-0117 KEH32736 Medicago truncatula 72 5e-87 317
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 75 9e-86 313
WERAM-Thc-0075 EOY26404 Theobroma cacao 73 1e-85 313
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 75 3e-85 311
WERAM-Amt-0032 ERN11177 Amborella trichopoda 65 9e-81 296
WERAM-Mua-0059 GSMUA_Achr3P16750_001 Musa acuminata 65 1e-79 293
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 69 1e-79 293
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 68 2e-78 289
WERAM-Sob-0115 Sb08g006530.1 Sorghum bicolor 65 1e-77 286
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 67 2e-77 285
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 67 2e-77 285
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 67 2e-77 285
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 67 2e-77 285
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 67 2e-77 285
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 67 2e-77 285
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 67 2e-77 285
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 67 2e-77 285
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 68 7e-77 283
WERAM-Sei-0086 Si023009m Setaria italica 63 1e-76 283
WERAM-Aet-0106 EMT19247 Aegilops tauschii 63 1e-75 280
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 62 1e-75 280
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 64 2e-75 278
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 62 1e-74 276
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 64 5e-72 267
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 62 2e-71 266
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 67 4e-70 261
WERAM-Php-0091 PP1S38_137V6.1 Physcomitrella patens 58 1e-68 256
Created Date 25-Jun-2016