WERAM Information

Tag Content
WERAM ID WERAM-Brr-0057
Ensembl Protein ID Bra010705.1-P
Gene Name SHL1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra010705 Bra010705.1 Bra010705.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 8.90e-10 39.6 249 296
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    +C  C+ +++ ++ mvqC+eC++wfH +C++ + + +++ +++yC++C 
  Bra010705.1-P 249 FCK-CEMPYNPDDLMVQCEECSEWFHPSCIGTTIEAAKKLDHFYCEECS 296
                    899.*877777778*******************666665578******7 PP
Protein Sequence
(Fasta)		MENISGLMAF DMGELRNNLP KKRGLSRFYS GKARSYVCIF DVKCLEDLKK PTQLLDIDDD 60
DVAYTKRKKK NKQSSSSSFS AAVNSNVNYQ NYPCRRVSSS THCSSPCMPK QKAQKKQLKS 120
YKLKHINRTI QEGDAVLMRS SEPGKPSYVA RVEAIEATDA RGSNARVRVR WYYRPEESMG 180
GRRQFHGAKE VFLSDHFDLQ SADTIEGKCK VHSFSSYTKL SSVGNDDFFC RFEYNSATGA 240
FIPDRVAVFC KCEMPYNPDD LMVQCEECSE WFHPSCIGTT IEAAKKLDHF YCEECSPEQQ 300
DLDNSNSTSK TTDAKVNTKR SLEVSKTRNK HAKRSG 336
Nucleotide Sequence
(Fasta)		ATGGAAAACA TAAGTGGGTT GATGGCTTTT GACATGGGGG AGCTAAGAAA CAACCTTCCC 60
AAAAAGAGAG GATTGTCAAG GTTCTACTCA GGGAAAGCAA GATCATATGT TTGTATCTTT 120
GATGTTAAAT GCCTTGAAGA TCTGAAGAAA CCAACCCAAC TTCTTGATAT TGATGATGAT 180
GATGTTGCGT ACACGAAGAG GAAGAAGAAG AATAAGCAAT CGTCTTCATC TTCATTTTCT 240
GCTGCTGTGA ACAGCAATGT TAACTATCAA AACTACCCTT GTCGTAGAGT TTCTAGTAGC 300
ACACATTGTT CCTCACCTTG TATGCCCAAG CAAAAAGCTC AAAAGAAGCA ACTCAAATCC 360
TACAAACTCA AACACATCAA CAGAACCATT CAAGAGGGAG ATGCGGTGTT GATGCGGTCA 420
TCGGAGCCTG GGAAACCGTC GTACGTGGCG AGGGTGGAGG CGATCGAGGC GACGGACGCG 480
CGTGGATCGA ACGCGAGGGT TCGCGTGAGG TGGTACTACC GCCCCGAGGA GTCCATGGGA 540
GGGAGGAGGC AGTTCCACGG AGCTAAGGAG GTGTTTCTTT CGGATCACTT TGACTTGCAG 600
AGCGCTGATA CGATCGAAGG CAAGTGTAAG GTTCACAGTT TCAGTAGCTA CACGAAACTC 660
AGCTCCGTGG GAAACGACGA CTTCTTCTGT CGTTTTGAGT ATAATTCTGC AACTGGGGCT 720
TTTATTCCCG ACAGAGTCGC CGTATTCTGC AAGTGTGAGA TGCCGTACAA CCCTGATGAC 780
TTGATGGTTC AGTGCGAGGA GTGTTCTGAG TGGTTTCACC CTTCTTGTAT AGGAACAACA 840
ATAGAGGCAG CTAAAAAGCT CGATCACTTC TACTGTGAAG AGTGTTCCCC GGAACAGCAG 900
GATTTGGATA ACTCTAATTC GACTTCCAAA ACCACAGATG CTAAGGTGAA TACAAAGCGC 960
AGCCTGGAGG TAAGCAAGAC GAGGAACAAA CACGCCAAGC GATCAGGTTA A 1012
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0061 Bo3g149870.1 Brassica oleracea 98 3e-127 451
WERAM-Arl-0103 fgenesh2_kg.7__ 111__ AT4G39100.1 Arabidopsis lyrata 89 8e-121 430
WERAM-Art-0113 AT4G39100.1 Arabidopsis thaliana 88 6e-119 424
WERAM-Glm-0054 GLYMA06G01180.1 Glycine max 72 8e-93 337
WERAM-Thc-0022 EOX97912 Theobroma cacao 73 2e-92 336
WERAM-Met-0082 AES74236 Medicago truncatula 71 4e-91 332
WERAM-Prp-0088 EMJ01661 Prunus persica 72 3e-90 329
WERAM-Pot-0047 POPTR_0004s16700.1 Populus trichocarpa 71 1e-88 323
WERAM-Orni-0072 ONIVA07G04420.1 Oryza nivara 68 2e-87 319
WERAM-Orm-0053 OMERI05G17820.1 Oryza meridionalis 68 2e-87 319
WERAM-Sol-0022 Solyc01g110020.2.1 Solanum lycopersicum 69 2e-87 319
WERAM-Orb-0072 OBART07G05590.1 Oryza barthii 64 4e-87 318
WERAM-Viv-0010 VIT_03s0038g00160.t01 Vitis vinifera 70 8e-87 317
WERAM-Ors-0065 OS07T0186400-01 Oryza sativa 67 1e-86 317
WERAM-Ori-0083 BGIOSGA025290-PA Oryza indica 67 1e-86 317
WERAM-Sei-0120 Si031067m Setaria italica 67 2e-85 313
WERAM-Sob-0018 Sb02g004890.1 Sorghum bicolor 66 3e-85 312
WERAM-Zem-0061 GRMZM2G097726_P02 Zea mays 67 4e-85 311
WERAM-Lep-0072 LPERR07G04960.1 Leersia perrieri 65 9e-85 310
WERAM-Sot-0093 PGSC0003DMT400079501 Solanum tuberosum 68 2e-84 310
WERAM-Brd-0029 BRADI1G55090.1 Brachypodium distachyon 65 1e-83 307
WERAM-Orl-0080 KN539704.1_FGP005 Oryza longistaminata 71 3e-82 302
WERAM-Org-0073 ORGLA07G0046800.1 Oryza glaberrima 72 3e-82 302
WERAM-Orbr-0081 OB07G14170.1 Oryza brachyantha 72 3e-82 302
WERAM-Sem-0075 EFJ26805 Selaginella moellendorffii 63 9e-81 297
WERAM-Mua-0144 GSMUA_Achr9P25510_001 Musa acuminata 64 1e-80 297
WERAM-Orp-0039 OPUNC03G34660.1 Oryza punctata 63 5e-80 295
WERAM-Amt-0094 ERM95501 Amborella trichopoda 66 1e-79 294
WERAM-Orgl-0099 OGLUM09G09260.1 Oryza glumaepatula 66 1e-78 290
WERAM-Orr-0106 ORUFI09G09520.1 Oryza rufipogon 66 5e-78 288
WERAM-Tra-0053 Traes_2AS_BD0861D99.1 Triticum aestivum 68 7e-78 288
WERAM-Php-0116 PP1S56_182V6.1 Physcomitrella patens 66 6e-77 285
WERAM-Hov-0101 MLOC_71907.1 Hordeum vulgare 59 8e-75 277
WERAM-Aet-0060 EMT02157 Aegilops tauschii 64 2e-73 273
WERAM-Tru-0056 TRIUR3_22993-P1 Triticum urartu 53 8e-51 198
WERAM-Chr-0035 EDO98852 Chlamydomonas reinhardtii 41 2e-41 166
WERAM-Osl-0033 ABO95088 Ostreococcus lucimarinus 45 2e-40 163
WERAM-Prc-0121 ENSPCAP00000010850.1 Procavia capensis 34 5e-10 62.8
WERAM-Anc-0126 ENSACAP00000011870.3 Anolis carolinensis 36 2e-09 60.5
WERAM-Cap-0130 ENSCPOP00000010443.2 Cavia porcellus 40 3e-09 60.1
WERAM-Ran-0162 ENSRNOP00000032833.4 Rattus norvegicus 42 4e-09 59.7
WERAM-Lac-0125 ENSLACP00000014816.1 Latimeria chalumnae 40 4e-09 59.7
WERAM-Xet-0141 ENSXETP00000047696.4 Xenopus tropicalis 40 4e-09 59.7
WERAM-Tas-0113 ENSTSYP00000011554.1 Tarsius syrichta 40 5e-09 59.3
WERAM-Vip-0022 ENSVPAP00000002066.1 Vicugna pacos 40 5e-09 59.3
WERAM-Poa-0198 ENSPPYP00000022810.2 Pongo abelii 40 5e-09 59.3
WERAM-Hos-0203 ENSP00000350676.5 Homo sapiens 40 5e-09 59.3
WERAM-Gog-0162 ENSGGOP00000014352.2 Gorilla gorilla 40 5e-09 59.3
WERAM-Nol-0174 ENSNLEP00000019631.2 Nomascus leucogenys 40 5e-09 59.3
WERAM-Caf-0169 ENSCAFP00000024137.2 Canis familiaris 40 5e-09 59.3
WERAM-Pof-0120 ENSPFOP00000010415.2 Poecilia formosa 38 5e-09 59.3
WERAM-Mam-0070 ENSMMUP00000011473.2 Macaca mulatta 40 5e-09 59.3
WERAM-Fec-0005 ENSFCAP00000000567.3 Felis catus 40 5e-09 59.3
WERAM-Xim-0128 ENSXMAP00000010848.1 Xiphophorus maculatus 38 5e-09 59.3
WERAM-Ptv-0061 ENSPVAP00000006309.1 Pteropus vampyrus 40 5e-09 59.3
WERAM-Eqc-0214 ENSECAP00000022798.1 Equus caballus 40 5e-09 59.3
WERAM-Chs-0149 ENSCSAP00000008671.1 Chlorocebus sabaeus 40 6e-09 59.3
WERAM-Mum-0169 ENSMUSP00000127653.1 Mus musculus 40 6e-09 59.3
WERAM-Myl-0006 ENSMLUP00000000462.2 Myotis lucifugus 40 6e-09 59.3
WERAM-Mup-0130 ENSMPUP00000011455.1 Mustela putorius furo 40 6e-09 59.3
WERAM-Ova-0070 ENSOARP00000007621.1 Ovis aries 40 6e-09 59.3
WERAM-Paa-0022 ENSPANP00000018377.1 Papio anubis 40 6e-09 58.9
WERAM-Gaga-0056 ENSGALP00000008273.4 Gallus gallus 33 6e-09 58.9
WERAM-Tut-0051 ENSTTRP00000004269.1 Tursiops truncatus 40 6e-09 58.9
WERAM-Orc-0019 ENSOCUP00000002278.2 Oryctolagus cuniculus 40 6e-09 58.9
WERAM-Loa-0154 ENSLAFP00000013594.3 Loxodonta africana 36 6e-09 58.9
WERAM-Pat-0187 ENSPTRP00000042192.3 Pan troglodytes 40 7e-09 58.9
WERAM-Tag-0055 ENSTGUP00000003831.1 Taeniopygia guttata 40 7e-09 58.9
WERAM-Otg-0029 ENSOGAP00000001922.2 Otolemur garnettii 40 7e-09 58.9
WERAM-Aim-0075 ENSAMEP00000006562.1 Ailuropoda melanoleuca 40 7e-09 58.9
WERAM-Fia-0091 ENSFALP00000007322.1 Ficedula albicollis 40 7e-09 58.9
WERAM-Ect-0006 ENSETEP00000000305.1 Echinops telfairi 40 8e-09 58.9
WERAM-Crn-0026 AAW44599 Cryptococcus neoformans 45 8e-09 58.5
WERAM-Ora-0007 ENSOANP00000001114.1 Ornithorhynchus anatinus 40 9e-09 58.5
WERAM-Asm-0138 ENSAMXP00000013325.1 Astyanax mexicanus 31 9e-09 58.5
WERAM-Orn-0143 ENSONIP00000015119.1 Oreochromis niloticus 38 1e-08 58.2
WERAM-Dar-0045 ENSDARP00000045941.6 Danio rerio 30 1e-08 58.2
WERAM-Orla-0070 ENSORLP00000008997.1 Oryzias latipes 38 1e-08 58.2
WERAM-Tar-0180 ENSTRUP00000037980.1 Takifugu rubripes 38 1e-08 58.2
WERAM-Gam-0086 ENSGMOP00000008905.1 Gadus morhua 38 1e-08 58.2
WERAM-Cae-0039 F26H11.2a Caenorhabditis elegans 27 1e-08 57.8
WERAM-Ten-0078 ENSTNIP00000009506.1 Tetraodon nigroviridis 38 2e-08 57.8
WERAM-Sah-0039 ENSSHAP00000004512.1 Sarcophilus harrisii 38 3e-08 57.0
WERAM-Gaa-0089 ENSGACP00000011590.1 Gasterosteus aculeatus 36 3e-08 57.0
WERAM-Mod-0187 ENSMODP00000026122.3 Monodelphis domestica 40 3e-08 56.6
WERAM-Drm-0002 FBpp0072421 Drosophila melanogaster 37 6e-08 55.8
WERAM-Spr-0013 CBQ68026 Sporisorium reilianum 54 8e-08 55.5
WERAM-Caj-0235 ENSCJAP00000050740.1 Callithrix jacchus 40 8e-08 55.5
WERAM-Leo-0136 ENSLOCP00000016741.1 Lepisosteus oculatus 38 1e-07 55.1
WERAM-Dan-0075 ENSDNOP00000007530.3 Dasypus novemcinctus 37 2e-07 54.3
WERAM-Sus-0122 ENSSSCP00000017483.2 Sus scrofa 37 2e-07 53.9
WERAM-Pem-0097 ENSPMAP00000010124.1 Petromyzon marinus 38 2e-07 53.9
WERAM-Cii-0050 ENSCINP00000019842.3 Ciona intestinalis 33 3e-06 50.1
WERAM-Scp-0015 SPAC343.11c.1:pep Schizosaccharomyces pombe 32 4e-06 49.7
WERAM-Caa-0027 KGT65810 Candida albicans 39 4e-06 49.7
WERAM-Scj-0010 EEB06423 Schizosaccharomyces japonicus 40 4e-06 49.7
WERAM-Cis-0085 ENSCSAVP00000019686.1 Ciona savignyi 30 5e-06 49.3
Created Date 25-Jun-2016