WERAM Information


Tag Content
WERAM ID WERAM-Ran-0162
Ensembl Protein ID ENSRNOP00000032833.4
Gene Name RGD1310212
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000026582.5 ENSRNOT00000036473.5 ENSRNOP00000032833.4
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM PHF2_PHF8 2.10e-89 297.8 195 351
Me_Reader PHD 3.90e-12 46.7 6 54
Organism Rattus norvegicus
Domain Profile
  HDM PHF2_PHF8

              PHF2.txt   1 fsdtklselveppdivkklslvenlwpdeavlekpkvekycligvkdsytdfhidfggasvyyhvlkgekifylirpteanlalyeawe 89 
fs+t+ls+ ve+p+iv+kls+venlwp+e+ +e+p+v+kycl++v++sytdfhi+fgg+s++yhvlkgekifyli+pt+anl+l+++w+
ENSRNOP00000032833.4 195 FSNTRLSNTVEMPKIVRKLSWVENLWPEECGFERPTVQKYCLMSVQNSYTDFHIEFGGTSIWYHVLKGEKIFYLIHPTDANLTLFKCWS 283
79*************************************************************************************** PP
PHF2.txt 90 sssdqsevffgdkvdkaykvvvkqgqtllipagwihavltpvdclafggnflhslniemqlrayelek 157
ss+q+e+ffgd+vdk+yk++vkqgqtl+ip+gwi+avltpvdclafggnflhslniemql+aye ek
ENSRNOP00000032833.4 284 NSSNQKEMFFGDQVDKCYKCSVKQGQTLFIPTGWIYAVLTPVDCLAFGGNFLHSLNIEMQLKAYETEK 351
*****************************************************************997 PP

  Me_Reader PHD

               PHD.txt  2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51
+Cl C+++++ +++m++Cd C+dwfH++Cv+++++++ + + ++Cp C+
ENSRNOP00000032833.4 6 VYCL-CRQPYNVNHFMIECDLCQDWFHGSCVGIEEEKAVDIDIYHCPDCE 54
69*9.*****99**********************666665557******7 PP

Protein Sequence
(Fasta)
MALVPVYCLC RQPYNVNHFM IECDLCQDWF HGSCVGIEEE KAVDIDIYHC PDCEVIYGPS 60
IMKKWPASSK EHEALKREPV KTGSPIFIHQ LQGKTFDSSD EVILKPTGSQ LTVEFLEESS 120
FSIPILVLKK NGLGMTLPPT SFTVRDVEQY VGSDREIDVI DVACQASSKM MLGDFVKYYY 180
SRRREKVFNV INLEFSNTRL SNTVEMPKIV RKLSWVENLW PEECGFERPT VQKYCLMSVQ 240
NSYTDFHIEF GGTSIWYHVL KGEKIFYLIH PTDANLTLFK CWSNSSNQKE MFFGDQVDKC 300
YKCSVKQGQT LFIPTGWIYA VLTPVDCLAF GGNFLHSLNI EMQLKAYETE KHLSTAHLFK 360
FPSFETICWH VGKHMLDIFE GLRENGRYPA PYLVRGGKAL NLAFQAWTRK EVLPDHEDEI 420
PKTVQTVQLI EDLAREICLV EDTSQQSIPK TSTIFGLQQH HTNPSSLNRQ THSTSVSTST 480
LSLPSKSGSE KKSPKYKDIF KKEEQTSKER PTLGPNDQHS CNFMDLNNHQ ELKVGFSQNV 540
ECNITSTCLN DSDDDSKFDK VCDGNESLVP LLMANGSTKR VKSLSNSWRA KITKKEDKSK 600
LVEEKKMGDK FDLDTNDELQ TEKRLGKVKD SLVVRSKIPP NLPHVKFCSH QNQSCEPGET 660
EIDIVENYKI DEGMMEGVEG KLKNGGESDG ILDLLKARKQ VGGPGYVVLT DAPDYSSSKE 720
NTQDTVFMAE LQSSSPSPAP STLHTLWSGG QDQGYESSSS GLGTVFNSPV SQQTRRKWPI 780
KRLTYWRTES EEENACVDEQ DGLGACFKQV KYIYLSLESD DDDDDDDDDD DSVLRSLSKK 840
RKVSDNVPWI PRTGEIQTLL EQDHPVLEGT RVTSIEIGLA TAATKLSQQV NNMKLTLISP 900
GKKTASKQRQ SDLNPCPQTS AFLLLDP 927
Nucleotide Sequence
(Fasta)
CAGGTATTTA TATGAAACAT CAGAAAGTTA CCACCGACTT CAGGGCCAAA GAAAGTGGCC 60
TGGGAATGGC TCAAAGGTAG AGCAGGACAT AGAATTATTT CTCTGTTTTC TCTCAGTGAA 120
AGGAATTCCG AAGTCTGGGT CCCAGCGATC TATCGTCAAC AAGGGAGGGC GTTTGCTGCT 180
ACTTGCTCTT TTAACACCAC CACCTTGGTC TGCTCTAAAA CCTGTGAAGA TGGCCTTGGT 240
GCCTGTGTAT TGTCTTTGTA GACAGCCTTA CAATGTGAAC CACTTCATGA TTGAGTGTGA 300
CCTGTGCCAG GACTGGTTTC ATGGTAGTTG TGTTGGGATT GAAGAAGAAA AAGCTGTTGA 360
CATCGACATC TACCACTGCC CAGACTGTGA GGTCATATAT GGACCCTCCA TTATGAAAAA 420
ATGGCCTGCA TCGTCTAAAG AGCACGAAGC TCTCAAGAGG GAGCCAGTGA AGACTGGGAG 480
CCCTATCTTT ATTCACCAGC TCCAGGGTAA GACTTTTGAC AGCTCTGACG AAGTGATCTT 540
GAAGCCCACA GGAAGTCAGT TGACAGTGGA ATTCTTGGAA GAAAGTAGCT TCAGTATACC 600
TATCCTTGTC TTGAAGAAGA ATGGGTTGGG GATGACCCTT CCCCCAACAT CATTCACTGT 660
CAGAGATGTG GAACAATATG TTGGTTCTGA CAGAGAGATT GACGTGATTG ATGTGGCCTG 720
TCAGGCTAGC AGCAAGATGA TGCTGGGTGA TTTTGTGAAA TATTATTACA GCAGAAGGAG 780
GGAAAAAGTA TTTAATGTTA TTAATCTGGA ATTCTCTAAT ACTAGGCTTT CTAATACAGT 840
AGAGATGCCC AAGATAGTTC GTAAGCTTTC CTGGGTTGAA AACTTATGGC CAGAAGAGTG 900
TGGCTTTGAG AGACCCACTG TACAGAAGTA TTGCCTTATG AGTGTGCAGA ATAGCTATAC 960
TGATTTTCAC ATTGAATTTG GTGGCACTTC GATCTGGTAC CATGTACTTA AGGGTGAGAA 1020
GATCTTCTAC CTGATCCACC CAACAGATGC TAACCTGACT CTTTTTAAAT GTTGGAGCAA 1080
CTCTTCTAAC CAAAAAGAAA TGTTCTTTGG TGACCAGGTA GACAAATGTT ACAAGTGTTC 1140
TGTGAAGCAA GGACAGACAC TTTTCATTCC CACAGGATGG ATCTATGCTG TGCTGACCCC 1200
TGTCGACTGC CTGGCATTTG GAGGAAACTT CTTACACAGC CTCAACATTG AAATGCAGCT 1260
CAAAGCCTAC GAGACTGAGA AACATCTGAG TACAGCACAC CTCTTCAAGT TTCCAAGCTT 1320
TGAGACCATC TGTTGGCATG TGGGAAAGCA CATGCTGGAC ATCTTTGAAG GTTTGCGGGA 1380
GAATGGGAGA TACCCTGCAC CCTACTTGGT TCGTGGTGGT AAAGCTCTAA ATTTGGCCTT 1440
CCAAGCTTGG ACAAGGAAAG AAGTTCTGCC AGACCATGAG GATGAGATCC CAAAGACAGT 1500
GCAGACCGTA CAGCTCATTG AAGATCTGGC TAGGGAAATC TGTCTGGTCG AAGATACCTC 1560
CCAACAGAGC ATCCCAAAGA CAAGTACCAT CTTTGGGCTC CAGCAACACC ATACCAATCC 1620
CTCTTCCTTA AATAGGCAAA CTCATTCCAC TTCAGTATCC ACGTCTACAT TATCACTGCC 1680
CTCCAAAAGT GGTTCGGAAA AGAAAAGCCC GAAGTATAAA GACATCTTCA AGAAGGAAGA 1740
ACAAACAAGC AAGGAGAGAC CAACTTTGGG GCCTAATGAC CAACATAGCT GTAATTTCAT 1800
GGATCTAAAT AATCATCAAG AACTGAAGGT AGGCTTTTCC CAAAATGTAG AGTGTAACAT 1860
CACTAGTACG TGTTTGAATG ACTCAGATGA TGACTCAAAA TTTGACAAAG TCTGTGATGG 1920
GAATGAGAGC CTGGTCCCTC TGTTGATGGC TAATGGCAGT ACCAAGAGGG TGAAGAGCTT 1980
GTCCAATTCT TGGCGAGCCA AAATCACAAA GAAGGAAGAT AAATCAAAGT TGGTAGAAGA 2040
AAAAAAGATG GGAGACAAGT TTGACTTGGA TACAAATGAT GAGCTGCAGA CTGAAAAAAG 2100
ATTGGGCAAA GTAAAAGATA GTCTAGTAGT AAGGTCAAAA ATTCCCCCAA ATTTGCCCCA 2160
TGTGAAGTTT TGCTCTCACC AAAACCAAAG TTGTGAACCA GGGGAAACTG AAATTGACAT 2220
TGTGGAGAAC TATAAAATAG ATGAGGGAAT GATGGAAGGG GTTGAAGGCA AACTTAAGAA 2280
TGGAGGTGAA TCTGATGGAA TTCTTGATCT ACTTAAGGCC AGGAAACAGG TGGGAGGACC 2340
TGGCTATGTT GTCCTCACTG ATGCCCCAGA CTATTCCAGC AGTAAGGAGA ATACCCAGGA 2400
CACTGTGTTC ATGGCTGAAT TGCAGTCCTC CTCTCCTTCA CCAGCTCCTT CCACCCTTCA 2460
TACACTTTGG AGTGGGGGAC AAGACCAAGG CTACGAGAGC TCCAGCAGTG GCTTGGGCAC 2520
AGTGTTTAAC AGTCCTGTTT CTCAGCAGAC ACGGAGGAAA TGGCCCATCA AGCGGCTAAC 2580
ATATTGGAGA ACTGAAAGTG AGGAGGAAAA TGCCTGTGTG GATGAGCAGG ACGGCTTAGG 2640
AGCATGCTTC AAGCAAGTTA AGTATATCTA CTTATCCCTG GAATCTGATG ATGATGATGA 2700
CGACGACGAC GACGACGACG ACTCTGTTTT GAGATCTCTA TCAAAGAAAA GGAAGGTATC 2760
GGATAACGTC CCATGGATTC CTAGGACAGG TGAGATCCAA ACACTCCTGG AGCAGGACCA 2820
TCCTGTACTT GAGGGTACCA GAGTTACCTC CATTGAGATA GGCTTGGCTA CCGCAGCTAC 2880
AAAGCTATCA CAGCAAGTGA ACAACATGAA GCTCACTCTG ATTAGTCCAG GAAAAAAAAC 2940
AGCCAGTAAA CAGAGACAAT CAGACTTAAA CCCATGTCCT CAAACTTCAG CTTTTCTGTT 3000
GCTTGATCCT TAAGGGAATA TATATTTTAG TAAAAATATC CTATTTAAAT GGAATTTAAT 3060
AGGGTTATGT TTTTAATAGG AAGTTCTATA GAGTCGTGGG ATTTCTTAGA AATGTCTTGT 3120
AGGTTGTTAT TGGGATCCAG AAGAGATCGA GCAGGTCAGG AAGCTCTTTT ACTAAAACCT 3180
GCCTCTGTTG TTTATATCTC AGTGCTGCAT GTAACTTGGA AATAAAAGAA CTTTATTGGG 3240
GCTGGAGAAA TGGCTCAGTG GTTAAGAGCA TTGACTGCTC TTCCAGAGGT CCTGAGTTCA 3300
ATTCCCAGCA ACCACATGGT GGCTCACAAC CATCTGTAAT GGGATCTGAT GCCCTCTTCT 3360
GGTGTGTCTG AAGACAGCAA CAGTGTGCTC ATATTCATTA GATAAATAAA TATTTTCTTA 3420
AAAAAGAATT TTATTGATTT AAATAAACTC AAGATGAAGA AAACAAAAGG ACCACAACAA 3480
TAAAATATAA ACAAAAGACC CACC 3505
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0052 ENSMUSP00000024121.4 Mus musculus 79 0.0 1377
WERAM-Orc-0019 ENSOCUP00000002278.2 Oryctolagus cuniculus 70 0.0 1135
WERAM-Loa-0154 ENSLAFP00000013594.3 Loxodonta africana 71 0.0 1130
WERAM-Ova-0070 ENSOARP00000007621.1 Ovis aries 70 0.0 1129
WERAM-Nol-0174 ENSNLEP00000019631.2 Nomascus leucogenys 70 0.0 1129
WERAM-Mup-0130 ENSMPUP00000011455.1 Mustela putorius furo 71 0.0 1125
WERAM-Fec-0005 ENSFCAP00000000567.3 Felis catus 71 0.0 1125
WERAM-Hos-0203 ENSP00000350676.5 Homo sapiens 70 0.0 1123
WERAM-Myl-0006 ENSMLUP00000000462.2 Myotis lucifugus 69 0.0 1122
WERAM-Paa-0022 ENSPANP00000018377.1 Papio anubis 70 0.0 1122
WERAM-Chs-0149 ENSCSAP00000008671.1 Chlorocebus sabaeus 70 0.0 1122
WERAM-Gog-0162 ENSGGOP00000014352.2 Gorilla gorilla 70 0.0 1117
WERAM-Eqc-0214 ENSECAP00000022798.1 Equus caballus 70 0.0 1117
WERAM-Mam-0070 ENSMMUP00000011473.2 Macaca mulatta 70 0.0 1112
WERAM-Aim-0075 ENSAMEP00000006562.1 Ailuropoda melanoleuca 71 0.0 1104
WERAM-Caf-0169 ENSCAFP00000024137.2 Canis familiaris 70 0.0 1094
WERAM-Cap-0130 ENSCPOP00000010443.2 Cavia porcellus 70 0.0 1087
WERAM-Otg-0029 ENSOGAP00000001922.2 Otolemur garnettii 72 0.0 1087
WERAM-Dan-0011 ENSDNOP00000001170.3 Dasypus novemcinctus 69 0.0 1084
WERAM-Soa-0095 ENSSARP00000008902.1 Sorex araneus 66 0.0 1083
WERAM-Sus-0089 ENSSSCP00000013121.2 Sus scrofa 71 0.0 1080
WERAM-Bot-0124 ENSBTAP00000017673.4 Bos taurus 68 0.0 1067
WERAM-Pat-0187 ENSPTRP00000042192.3 Pan troglodytes 71 0.0 1062
WERAM-Caj-0235 ENSCJAP00000050740.1 Callithrix jacchus 62 0.0 1004
WERAM-Tub-0093 ENSTBEP00000010730.1 Tupaia belangeri 70 0.0 981
WERAM-Tut-0006 ENSTTRP00000000351.1 Tursiops truncatus 67 0.0 978
WERAM-Tas-0113 ENSTSYP00000011554.1 Tarsius syrichta 68 0.0 961
WERAM-Mod-0187 ENSMODP00000026122.3 Monodelphis domestica 55 0.0 916
WERAM-Ptv-0061 ENSPVAP00000006309.1 Pteropus vampyrus 63 0.0 905
WERAM-Xet-0141 ENSXETP00000047696.4 Xenopus tropicalis 53 0.0 886
WERAM-Poa-0198 ENSPPYP00000022810.2 Pongo abelii 60 0.0 881
WERAM-Anc-0126 ENSACAP00000011870.3 Anolis carolinensis 54 0.0 874
WERAM-Lac-0125 ENSLACP00000014816.1 Latimeria chalumnae 54 0.0 870
WERAM-Ect-0006 ENSETEP00000000305.1 Echinops telfairi 76 0.0 855
WERAM-Dar-0017 ENSDARP00000007140.7 Danio rerio 51 0.0 812
WERAM-Ict-0005 ENSSTOP00000000259.2 Ictidomys tridecemlineatus 77 0.0 812
WERAM-Asm-0138 ENSAMXP00000013325.1 Astyanax mexicanus 49 0.0 806
WERAM-Mae-0004 ENSMEUP00000000188.1 Macropus eugenii 55 0.0 793
WERAM-Dio-0011 ENSDORP00000001369.1 Dipodomys ordii 60 0.0 758
WERAM-Sah-0047 ENSSHAP00000005380.1 Sarcophilus harrisii 48 0.0 734
WERAM-Ora-0007 ENSOANP00000001114.1 Ornithorhynchus anatinus 72 0.0 730
WERAM-Xim-0128 ENSXMAP00000010848.1 Xiphophorus maculatus 70 0.0 713
WERAM-Orn-0143 ENSONIP00000015119.1 Oreochromis niloticus 70 0.0 709
WERAM-Pof-0120 ENSPFOP00000010415.2 Poecilia formosa 69 0.0 707
WERAM-Gam-0086 ENSGMOP00000008905.1 Gadus morhua 69 0.0 706
WERAM-Gaa-0089 ENSGACP00000011590.1 Gasterosteus aculeatus 69 0.0 705
WERAM-Orla-0070 ENSORLP00000008997.1 Oryzias latipes 68 0.0 701
WERAM-Ten-0185 ENSTNIP00000018140.1 Tetraodon nigroviridis 69 0.0 697
WERAM-Tar-0180 ENSTRUP00000037980.1 Takifugu rubripes 70 0.0 691
WERAM-Prc-0121 ENSPCAP00000010850.1 Procavia capensis 66 0.0 635
WERAM-Vip-0022 ENSVPAP00000002066.1 Vicugna pacos 63 3e-178 623
WERAM-Leo-0144 ENSLOCP00000017335.1 Lepisosteus oculatus 60 6e-171 598
WERAM-Gaga-0056 ENSGALP00000008273.4 Gallus gallus 58 3e-168 590
WERAM-Tag-0055 ENSTGUP00000003831.1 Taeniopygia guttata 58 5e-168 589
WERAM-Pem-0097 ENSPMAP00000010124.1 Petromyzon marinus 63 7e-168 588
WERAM-Fia-0091 ENSFALP00000007322.1 Ficedula albicollis 58 2e-167 587
WERAM-Anp-0115 ENSAPLP00000013232.1 Anas platyrhynchos 55 2e-150 531
WERAM-Meg-0060 ENSMGAP00000005425.2 Meleagris gallopavo 57 2e-147 521
WERAM-Pes-0093 ENSPSIP00000011413.1 Pelodiscus sinensis 55 4e-143 506
WERAM-Ere-0005 ENSEEUP00000000200.1 Erinaceus europaeus 54 3e-131 466
WERAM-Mim-0110 ENSMICP00000010445.1 Microcebus murinus 49 8e-123 439
WERAM-Drm-0062 FBpp0289915 Drosophila melanogaster 48 5e-76 283
WERAM-Miv-0040 MVLG_06132T0 Microbotryum violaceum 36 1e-73 275
WERAM-Ocp-0120 ENSOPRP00000012395.2 Ochotona princeps 45 5e-72 270
Created Date 25-Jun-2016