WERAM Information

Tag Content
WERAM ID WERAM-Bro-0097
Ensembl Protein ID Bo5g106210.1
Gene Name JMJD5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo5g106210 Bo5g106210.1 Bo5g106210.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JmjC_only 2.50e-50 171.5 261 413
Organism Brassica oleracea
Domain Profile
  HDM JmjC_only
  JmjC_only.txt   2 ledylvpktfsdqlwqlkeelsepfyclvgsn.......wfltGpassgfplHvddieaflvqveGrkrwrlyepsepaellk.....lasdeqvk 85 
                    +++yl++++++dq+++l++++++p+yc+vg +       wf  Gpa++++plH+d+++++l+qv G+k+ rly++s ++el++     l++++qv+
   Bo5g106210.1 261 EPTYLAQHPLFDQINELRDDICIPDYCFVGGGdlqslnaWF--GPAGTVTPLHHDPHHNILAQVVGKKYVRLYPSSLQDELYPysetmLCNSSQVD 354
                    589**************************************..***************************************************** PP
  JmjC_only.txt  86 qedllltkftliaprplletvlepgellyiprgtwHqalsldvtlsvsqnfssetflen 144
                     +++++++f+++ + ++++++le+ge+lyip+++wH+++sl++++svs+++s+e+++++
   Bo5g106210.1 355 LDNIDKNEFPKAVELEFMDCILEEGEMLYIPPKWWHYVRSLTMSFSVSFWWSNEAESSD 413
                    ****************************************************9998875 PP
Protein Sequence
(Fasta)		MSGAPTAASS GNHSLHLPTP TLDAESQSLL QSISAQGGYA YARMAALAVA GDQSAAEAAR 60
DMAWEQLHSG PWHSVLPVWR DAYSMACLHV AKFHFAAGEF GEALGALDMG LIMGGTLLRK 120
DLHDSVLLVS SEARKMAKSL GDFKGEKLVP EVPVDVNEVL KILPLRSLTS GRVEKRCDLS 180
MEGFLRDYFQ TGTPVVITNC MAHWPARTKW NHLDYLTSVA GNRTVPVEVG KNYLCSDWKQ 240
ELVTFSKFLE RMRTNRSTSV EPTYLAQHPL FDQINELRDD ICIPDYCFVG GGDLQSLNAW 300
FGPAGTVTPL HHDPHHNILA QVVGKKYVRL YPSSLQDELY PYSETMLCNS SQVDLDNIDK 360
NEFPKAVELE FMDCILEEGE MLYIPPKWWH YVRSLTMSFS VSFWWSNEAE SSDS 414
Nucleotide Sequence
(Fasta)		ATGTCAGGAG CTCCCACCGC CGCTTCCTCC GGAAACCACA GCCTCCATCT CCCGACTCCA 60
ACCCTCGACG CGGAGTCGCA ATCCCTGCTG CAGTCGATCT CCGCTCAAGG CGGTTACGCC 120
TATGCTCGCA TGGCGGCGCT AGCAGTCGCC GGCGACCAAA GCGCGGCGGA GGCGGCGCGT 180
GATATGGCCT GGGAGCAGCT TCACTCCGGT CCCTGGCACT CTGTTCTCCC CGTCTGGCGC 240
GACGCTTACT CGATGGCTTG TCTCCACGTC GCCAAGTTCC ATTTCGCCGC CGGCGAGTTT 300
GGGGAAGCTC TCGGCGCGCT CGATATGGGT CTCATCATGG GAGGGACGCT TCTCCGCAAG 360
GACCTCCACG ACTCTGTGCT CTTGGTCTCC TCTGAAGCTC GTAAGATGGC TAAGAGCCTC 420
GGAGATTTCA AGGGTGAGAA GTTGGTCCCT GAAGTTCCCG TCGATGTCAA TGAGGTGCTA 480
AAGATTCTAC CTTTGAGGTC ATTGACTAGT GGAAGGGTAG AGAAGAGGTG TGATTTATCT 540
ATGGAGGGGT TTCTTCGTGA TTATTTTCAG ACAGGTACAC CTGTTGTTAT AACCAATTGT 600
ATGGCTCATT GGCCAGCTAG GACCAAGTGG AACCACTTGG ACTATCTCAC TTCTGTTGCT 660
GGTAACCGTA CCGTTCCCGT CGAGGTGGGG AAAAACTATT TGTGTTCAGA TTGGAAGCAA 720
GAGCTTGTGA CTTTTTCCAA GTTCCTTGAA CGGATGAGGA CCAATAGATC CACCTCCGTG 780
GAACCTACTT ATCTTGCTCA GCATCCGTTG TTTGATCAGA TAAATGAACT GAGAGATGAT 840
ATATGTATTC CTGATTACTG TTTTGTCGGT GGAGGGGATC TCCAATCCCT TAATGCTTGG 900
TTTGGTCCGG CTGGGACAGT TACTCCTTTA CACCATGATC CACATCATAA TATACTTGCT 960
CAGGTTGTTG GCAAGAAGTA TGTAAGGCTT TACCCATCCT CGTTGCAAGA CGAACTTTAC 1020
CCTTATTCTG AGACAATGCT TTGCAACTCT AGCCAGGTTG ATCTTGACAA CATCGACAAG 1080
AACGAGTTTC CAAAGGCGGT GGAGCTAGAG TTTATGGATT GTATCCTAGA GGAAGGAGAA 1140
ATGCTGTACA TCCCTCCCAA ATGGTGGCAC TATGTCAGGT CTTTAACAAT GAGTTTCTCG 1200
GTTAGCTTCT GGTGGAGCAA TGAAGCAGAG TCCTCTGATT CTTAG 1246
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0177 Bra035742.1-P Brassica rapa 99 0.0 800
WERAM-Art-0076 AT3G20810.2 Arabidopsis thaliana 87 0.0 721
WERAM-Arl-0063 fgenesh2_kg.3__ 2308__ AT3G20810.2 Arabidopsis lyrata 87 0.0 717
WERAM-Viv-0032 VIT_06s0004g01630.t01 Vitis vinifera 72 4e-161 565
WERAM-Met-0103 KEH30262 Medicago truncatula 71 1e-159 560
WERAM-Pot-0003 POPTR_0001s05390.1 Populus trichocarpa 71 6e-159 557
WERAM-Prp-0114 EMJ09022 Prunus persica 70 1e-155 546
WERAM-Thc-0109 EOY32544 Theobroma cacao 69 4e-155 545
WERAM-Sot-0067 PGSC0003DMT400055008 Solanum tuberosum 68 7e-152 534
WERAM-Glm-0128 GLYMA11G13911.1 Glycine max 67 5e-149 524
WERAM-Mua-0142 GSMUA_Achr9P20180_001 Musa acuminata 61 8e-134 474
WERAM-Sob-0030 Sb02g028370.1 Sorghum bicolor 58 5e-126 448
WERAM-Sei-0115 Si029989m Setaria italica 58 4e-125 445
WERAM-Lep-0101 LPERR09G10850.1 Leersia perrieri 57 1e-124 443
WERAM-Zem-0040 GRMZM2G052908_P01 Zea mays 58 1e-124 443
WERAM-Orgl-0101 OGLUM09G15350.1 Oryza glumaepatula 57 2e-124 443
WERAM-Ors-0093 OS09T0489200-00 Oryza sativa 57 2e-124 443
WERAM-Ori-0103 BGIOSGA029547-PA Oryza indica 54 9e-120 427
WERAM-Brd-0110 BRADI4G33727.1 Brachypodium distachyon 60 1e-119 427
WERAM-Php-0008 PP1S105_124V6.1 Physcomitrella patens 54 2e-108 390
WERAM-Orr-0098 ORUFI08G22350.2 Oryza rufipogon 54 7e-105 378
WERAM-Sem-0027 EFJ27560 Selaginella moellendorffii 51 3e-104 376
WERAM-Tru-0087 TRIUR3_31518-P1 Triticum urartu 64 4e-102 369
WERAM-Tra-0293 Traes_7AS_08AEBE00A.2 Triticum aestivum 65 6e-102 368
WERAM-Orbr-0102 OB08G26850.1 Oryza brachyantha 63 1e-97 354
WERAM-Orni-0094 ONIVA08G22510.3 Oryza nivara 50 1e-90 330
WERAM-Hov-0087 MLOC_65982.1 Hordeum vulgare 70 2e-80 296
WERAM-Cap-0027 ENSCPOP00000002073.2 Cavia porcellus 44 3e-77 286
WERAM-Aim-0052 ENSAMEP00000004259.1 Ailuropoda melanoleuca 42 5e-75 278
WERAM-Mup-0147 ENSMPUP00000012892.1 Mustela putorius furo 43 2e-74 276
WERAM-Sah-0112 ENSSHAP00000012011.1 Sarcophilus harrisii 41 4e-74 276
WERAM-Otg-0122 ENSOGAP00000010606.2 Otolemur garnettii 42 4e-74 275
WERAM-Tut-0101 ENSTTRP00000008521.1 Tursiops truncatus 43 3e-73 273
WERAM-Mum-0112 ENSMUSP00000033010.2 Mus musculus 41 3e-73 273
WERAM-Orn-0019 ENSONIP00000001749.1 Oreochromis niloticus 43 4e-73 272
WERAM-Ran-0101 ENSRNOP00000020388.4 Rattus norvegicus 41 3e-72 270
WERAM-Tar-0148 ENSTRUP00000031961.1 Takifugu rubripes 42 3e-72 270
WERAM-Gaa-0145 ENSGACP00000018511.1 Gasterosteus aculeatus 42 3e-72 269
WERAM-Prc-0093 ENSPCAP00000008339.1 Procavia capensis 42 4e-72 269
WERAM-Caf-0187 ENSCAFP00000025742.3 Canis familiaris 42 6e-72 268
WERAM-Mod-0137 ENSMODP00000019296.2 Monodelphis domestica 40 8e-72 268
WERAM-Pof-0141 ENSPFOP00000011752.1 Poecilia formosa 41 1e-71 267
WERAM-Loa-0169 ENSLAFP00000015542.3 Loxodonta africana 40 2e-71 266
WERAM-Ova-0201 ENSOARP00000020136.1 Ovis aries 42 2e-71 266
WERAM-Eqc-0005 ENSECAP00000000474.1 Equus caballus 41 3e-71 266
WERAM-Xet-0135 ENSXETP00000047024.2 Xenopus tropicalis 39 4e-71 266
WERAM-Gaga-0066 ENSGALP00000010168.4 Gallus gallus 42 4e-71 265
WERAM-Sus-0055 ENSSSCP00000008347.2 Sus scrofa 43 5e-71 265
WERAM-Bot-0170 ENSBTAP00000026023.5 Bos taurus 42 6e-71 265
WERAM-Nol-0122 ENSNLEP00000014249.2 Nomascus leucogenys 40 7e-71 265
WERAM-Fec-0011 ENSFCAP00000000891.3 Felis catus 43 7e-71 265
WERAM-Tag-0119 ENSTGUP00000009777.1 Taeniopygia guttata 42 8e-71 265
WERAM-Ptv-0038 ENSPVAP00000004151.1 Pteropus vampyrus 41 2e-70 263
WERAM-Gog-0074 ENSGGOP00000006358.2 Gorilla gorilla 40 2e-70 263
WERAM-Xim-0107 ENSXMAP00000009477.1 Xiphophorus maculatus 41 2e-70 263
WERAM-Ten-0217 ENSTNIP00000021769.1 Tetraodon nigroviridis 41 2e-70 263
WERAM-Myl-0091 ENSMLUP00000007518.2 Myotis lucifugus 40 3e-70 263
WERAM-Gam-0047 ENSGMOP00000004939.1 Gadus morhua 40 3e-70 263
WERAM-Poa-0063 ENSPPYP00000008151.1 Pongo abelii 40 4e-70 263
WERAM-Ict-0169 ENSSTOP00000022768.1 Ictidomys tridecemlineatus 43 4e-70 262
WERAM-Hos-0166 ENSP00000286096.4 Homo sapiens 40 4e-70 262
WERAM-Paa-0062 ENSPANP00000012432.1 Papio anubis 40 4e-70 262
WERAM-Dio-0095 ENSDORP00000009624.1 Dipodomys ordii 42 6e-70 262
WERAM-Pat-0060 ENSPTRP00000013519.3 Pan troglodytes 40 8e-70 261
WERAM-Lac-0048 ENSLACP00000007034.1 Latimeria chalumnae 38 9e-70 261
WERAM-Chs-0075 ENSCSAP00000002744.1 Chlorocebus sabaeus 40 3e-69 259
WERAM-Mam-0145 ENSMMUP00000020806.2 Macaca mulatta 39 3e-69 259
WERAM-Pes-0097 ENSPSIP00000011968.1 Pelodiscus sinensis 40 4e-69 259
WERAM-Leo-0023 ENSLOCP00000004737.1 Lepisosteus oculatus 40 4e-68 255
WERAM-Orla-0050 ENSORLP00000006206.1 Oryzias latipes 42 6e-68 255
WERAM-Ere-0039 ENSEEUP00000002911.1 Erinaceus europaeus 42 7e-68 255
WERAM-Dan-0154 ENSDNOP00000024517.1 Dasypus novemcinctus 41 1e-67 254
WERAM-Dar-0218 ENSDARP00000133489.1 Danio rerio 40 1e-67 254
WERAM-Tub-0083 ENSTBEP00000009713.1 Tupaia belangeri 43 2e-67 254
WERAM-Tas-0011 ENSTSYP00000001358.1 Tarsius syrichta 51 8e-65 245
WERAM-Fia-0169 ENSFALP00000014680.1 Ficedula albicollis 50 5e-62 235
WERAM-Chh-0005 ENSCHOP00000000442.1 Choloepus hoffmanni 38 6e-62 235
WERAM-Anc-0031 ENSACAP00000003528.2 Anolis carolinensis 40 1e-61 234
WERAM-Anp-0138 ENSAPLP00000014931.1 Anas platyrhynchos 50 5e-59 226
WERAM-Caj-0217 ENSCJAP00000038116.2 Callithrix jacchus 36 8e-58 221
WERAM-Mae-0065 ENSMEUP00000005887.1 Macropus eugenii 36 2e-56 217
WERAM-Mim-0094 ENSMICP00000008672.1 Microcebus murinus 37 4e-55 213
WERAM-Asm-0055 ENSAMXP00000006811.1 Astyanax mexicanus 24 2e-07 54.7
Created Date 25-Jun-2016