WERAM Information

Tag Content
WERAM ID WERAM-Bro-0061
Ensembl Protein ID Bo3g149870.1
Gene Name SHL1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo3g149870 Bo3g149870.1 Bo3g149870.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.20e-09 39.7 142 189
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                   +C  C+ +++ ++ mvqC+eC++wfH +C++ + + +++ +++yC++C 
  Bo3g149870.1 142 FCK-CEMPYNPDDLMVQCEECSEWFHPSCIGTTIEAAKKLDHFYCEECS 189
                   899.*877777778*******************666665578******7 PP
Protein Sequence
(Fasta)		MPKQKAQKKQ LKSYKLKHIN RTIQEGDAVL MRSSEPGKPS YVARVEAIEA TDARGSNARV 60
RVRWYYRPEE SMGGRRQFHG AKEVFLSDHF DLQSADTIEG KCKVHSFSSY TKLSSVGNDD 120
FFCRFEYNSA TGAFIPDRVA VFCKCEMPYN PDDLMVQCEE CSEWFHPSCI GTTIEAAKKL 180
DHFYCEECSP ELENLDNANS TSKNTDAKVN TKRSLEVSKT RNKHAKRSG 229
Nucleotide Sequence
(Fasta)		ATGCCCAAGC AAAAAGCTCA AAAGAAGCAA CTCAAATCCT ACAAACTCAA ACACATCAAC 60
AGAACGATTC AAGAGGGAGA TGCGGTTTTG ATGCGGTCTT CGGAGCCTGG GAAACCGTCG 120
TACGTGGCGA GGGTGGAGGC GATCGAGGCG ACGGACGCGC GTGGATCCAA CGCGAGGGTT 180
CGCGTGAGGT GGTACTACCG CCCCGAGGAG TCCATGGGAG GGAGGAGGCA GTTTCATGGA 240
GCTAAGGAGG TGTTTCTTTC GGATCACTTT GACTTGCAGA GCGCTGATAC GATCGAAGGA 300
AAGTGTAAGG TTCACAGTTT CAGTAGCTAC ACGAAACTCA GCTCTGTTGG AAACGACGAC 360
TTCTTCTGTC GTTTTGAGTA TAATTCTGCA ACCGGGGCTT TTATTCCCGA CAGAGTCGCC 420
GTATTCTGCA AGTGTGAGAT GCCGTACAAC CCTGATGACT TGATGGTTCA ATGCGAGGAG 480
TGTTCTGAGT GGTTTCACCC TTCTTGTATA GGAACAACAA TAGAGGCAGC TAAAAAGCTC 540
GATCACTTCT ACTGCGAAGA GTGTTCCCCA GAACTGGAGA ACTTGGACAA CGCTAATTCG 600
ACTTCCAAAA ACACAGATGC TAAGGTGAAT ACAAAGCGCA GCCTGGAGGT AAGCAAGACG 660
AGGAACAAAC ACGCCAAGCG ATCAGGTTAA 691
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0057 Bra010705.1-P Brassica rapa 98 8e-128 452
WERAM-Arl-0103 fgenesh2_kg.7__ 111__ AT4G39100.1 Arabidopsis lyrata 89 2e-121 431
WERAM-Art-0113 AT4G39100.1 Arabidopsis thaliana 87 4e-119 424
WERAM-Glm-0054 GLYMA06G01180.1 Glycine max 71 1e-92 336
WERAM-Thc-0022 EOX97912 Theobroma cacao 72 4e-92 334
WERAM-Met-0082 AES74236 Medicago truncatula 70 3e-90 328
WERAM-Prp-0088 EMJ01661 Prunus persica 71 5e-90 327
WERAM-Pot-0107 POPTR_0009s12380.1 Populus trichocarpa 70 2e-88 322
WERAM-Orni-0072 ONIVA07G04420.1 Oryza nivara 67 2e-87 318
WERAM-Orm-0053 OMERI05G17820.1 Oryza meridionalis 67 2e-87 318
WERAM-Sol-0022 Solyc01g110020.2.1 Solanum lycopersicum 68 4e-87 317
WERAM-Orb-0072 OBART07G05590.1 Oryza barthii 64 6e-87 317
WERAM-Ors-0065 OS07T0186400-01 Oryza sativa 67 1e-86 316
WERAM-Ori-0083 BGIOSGA025290-PA Oryza indica 67 1e-86 316
WERAM-Viv-0010 VIT_03s0038g00160.t01 Vitis vinifera 69 2e-86 315
WERAM-Sei-0120 Si031067m Setaria italica 66 3e-85 311
WERAM-Sob-0018 Sb02g004890.1 Sorghum bicolor 65 4e-85 311
WERAM-Zem-0061 GRMZM2G097726_P02 Zea mays 66 5e-85 310
WERAM-Lep-0072 LPERR07G04960.1 Leersia perrieri 72 1e-84 310
WERAM-Sot-0093 PGSC0003DMT400079501 Solanum tuberosum 67 1e-84 309
WERAM-Brd-0029 BRADI1G55090.1 Brachypodium distachyon 65 6e-84 307
WERAM-Orl-0080 KN539704.1_FGP005 Oryza longistaminata 70 4e-82 301
WERAM-Org-0073 ORGLA07G0046800.1 Oryza glaberrima 71 4e-82 301
WERAM-Orbr-0081 OB07G14170.1 Oryza brachyantha 71 8e-82 300
WERAM-Orp-0039 OPUNC03G34660.1 Oryza punctata 64 7e-81 296
WERAM-Sem-0075 EFJ26805 Selaginella moellendorffii 62 1e-80 296
WERAM-Mua-0144 GSMUA_Achr9P25510_001 Musa acuminata 63 1e-80 296
WERAM-Orgl-0099 OGLUM09G09260.1 Oryza glumaepatula 66 2e-79 292
WERAM-Amt-0094 ERM95501 Amborella trichopoda 65 2e-79 291
WERAM-Orr-0106 ORUFI09G09520.1 Oryza rufipogon 65 9e-79 290
WERAM-Tra-0053 Traes_2AS_BD0861D99.1 Triticum aestivum 70 2e-78 288
WERAM-Php-0116 PP1S56_182V6.1 Physcomitrella patens 66 2e-77 286
WERAM-Hov-0101 MLOC_71907.1 Hordeum vulgare 59 9e-76 280
WERAM-Aet-0060 EMT02157 Aegilops tauschii 69 2e-73 272
WERAM-Tru-0056 TRIUR3_22993-P1 Triticum urartu 53 2e-51 199
WERAM-Chr-0035 EDO98852 Chlamydomonas reinhardtii 42 4e-41 164
WERAM-Osl-0033 ABO95088 Ostreococcus lucimarinus 45 8e-41 164
WERAM-Prc-0121 ENSPCAP00000010850.1 Procavia capensis 34 1e-10 63.5
WERAM-Anc-0126 ENSACAP00000011870.3 Anolis carolinensis 36 2e-10 63.2
WERAM-Myl-0006 ENSMLUP00000000462.2 Myotis lucifugus 34 7e-10 61.2
WERAM-Cap-0130 ENSCPOP00000010443.2 Cavia porcellus 40 1e-09 60.5
WERAM-Xet-0141 ENSXETP00000047696.4 Xenopus tropicalis 40 1e-09 60.5
WERAM-Ran-0162 ENSRNOP00000032833.4 Rattus norvegicus 42 1e-09 60.5
WERAM-Lac-0125 ENSLACP00000014816.1 Latimeria chalumnae 40 1e-09 60.5
WERAM-Gog-0162 ENSGGOP00000014352.2 Gorilla gorilla 33 1e-09 60.5
WERAM-Tas-0113 ENSTSYP00000011554.1 Tarsius syrichta 40 2e-09 60.1
WERAM-Vip-0022 ENSVPAP00000002066.1 Vicugna pacos 40 2e-09 60.1
WERAM-Hos-0203 ENSP00000350676.5 Homo sapiens 40 2e-09 60.1
WERAM-Xim-0128 ENSXMAP00000010848.1 Xiphophorus maculatus 38 2e-09 60.1
WERAM-Nol-0174 ENSNLEP00000019631.2 Nomascus leucogenys 40 2e-09 60.1
WERAM-Poa-0198 ENSPPYP00000022810.2 Pongo abelii 40 2e-09 60.1
WERAM-Mam-0070 ENSMMUP00000011473.2 Macaca mulatta 40 2e-09 60.1
WERAM-Pof-0120 ENSPFOP00000010415.2 Poecilia formosa 38 2e-09 60.1
WERAM-Caf-0169 ENSCAFP00000024137.2 Canis familiaris 40 2e-09 60.1
WERAM-Mum-0169 ENSMUSP00000127653.1 Mus musculus 40 2e-09 60.1
WERAM-Fec-0005 ENSFCAP00000000567.3 Felis catus 40 2e-09 60.1
WERAM-Ptv-0061 ENSPVAP00000006309.1 Pteropus vampyrus 40 2e-09 60.1
WERAM-Ova-0070 ENSOARP00000007621.1 Ovis aries 40 2e-09 60.1
WERAM-Eqc-0214 ENSECAP00000022798.1 Equus caballus 40 2e-09 60.1
WERAM-Orc-0019 ENSOCUP00000002278.2 Oryctolagus cuniculus 40 2e-09 60.1
WERAM-Chs-0149 ENSCSAP00000008671.1 Chlorocebus sabaeus 40 2e-09 59.7
WERAM-Paa-0022 ENSPANP00000018377.1 Papio anubis 40 2e-09 59.7
WERAM-Mup-0130 ENSMPUP00000011455.1 Mustela putorius furo 40 2e-09 59.7
WERAM-Tut-0051 ENSTTRP00000004269.1 Tursiops truncatus 40 2e-09 59.7
WERAM-Loa-0154 ENSLAFP00000013594.3 Loxodonta africana 36 2e-09 59.7
WERAM-Gaga-0056 ENSGALP00000008273.4 Gallus gallus 40 2e-09 59.7
WERAM-Crn-0026 AAW44599 Cryptococcus neoformans 45 2e-09 59.7
WERAM-Asm-0138 ENSAMXP00000013325.1 Astyanax mexicanus 31 2e-09 59.7
WERAM-Tag-0055 ENSTGUP00000003831.1 Taeniopygia guttata 40 2e-09 59.7
WERAM-Ect-0006 ENSETEP00000000305.1 Echinops telfairi 40 2e-09 59.7
WERAM-Pat-0187 ENSPTRP00000042192.3 Pan troglodytes 40 2e-09 59.7
WERAM-Otg-0029 ENSOGAP00000001922.2 Otolemur garnettii 40 2e-09 59.7
WERAM-Fia-0091 ENSFALP00000007322.1 Ficedula albicollis 40 2e-09 59.7
WERAM-Aim-0075 ENSAMEP00000006562.1 Ailuropoda melanoleuca 40 2e-09 59.7
WERAM-Ora-0007 ENSOANP00000001114.1 Ornithorhynchus anatinus 40 3e-09 59.3
WERAM-Cae-0039 F26H11.2a Caenorhabditis elegans 29 3e-09 59.3
WERAM-Orn-0143 ENSONIP00000015119.1 Oreochromis niloticus 38 3e-09 59.3
WERAM-Dar-0045 ENSDARP00000045941.6 Danio rerio 38 3e-09 58.9
WERAM-Orla-0070 ENSORLP00000008997.1 Oryzias latipes 38 4e-09 58.9
WERAM-Gam-0086 ENSGMOP00000008905.1 Gadus morhua 38 4e-09 58.9
WERAM-Tar-0040 ENSTRUP00000009774.1 Takifugu rubripes 38 4e-09 58.9
WERAM-Ten-0078 ENSTNIP00000009506.1 Tetraodon nigroviridis 38 4e-09 58.9
WERAM-Gaa-0089 ENSGACP00000011590.1 Gasterosteus aculeatus 36 8e-09 57.8
WERAM-Mod-0187 ENSMODP00000026122.3 Monodelphis domestica 40 9e-09 57.8
WERAM-Sah-0039 ENSSHAP00000004512.1 Sarcophilus harrisii 38 1e-08 57.0
WERAM-Drm-0002 FBpp0072421 Drosophila melanogaster 37 2e-08 56.6
WERAM-Spr-0013 CBQ68026 Sporisorium reilianum 40 3e-08 56.2
WERAM-Caj-0235 ENSCJAP00000050740.1 Callithrix jacchus 40 3e-08 55.8
WERAM-Leo-0136 ENSLOCP00000016741.1 Lepisosteus oculatus 38 3e-08 55.8
WERAM-Dan-0075 ENSDNOP00000007530.3 Dasypus novemcinctus 37 7e-08 54.7
WERAM-Sus-0122 ENSSSCP00000017483.2 Sus scrofa 37 8e-08 54.7
WERAM-Pem-0097 ENSPMAP00000010124.1 Petromyzon marinus 38 8e-08 54.3
WERAM-Caa-0027 KGT65810 Candida albicans 39 7e-07 51.2
WERAM-Scj-0010 EEB06423 Schizosaccharomyces japonicus 40 2e-06 50.1
WERAM-Sac-0050 YPL181W Saccharomyces cerevisiae 42 2e-06 49.7
WERAM-Tum-0002 CAZ79493 Tuber melanosporum 41 2e-06 49.7
WERAM-Kll-0022 CAG99888 Kluyveromyces lactis 39 2e-06 49.7
WERAM-Scp-0015 SPAC343.11c.1:pep Schizosaccharomyces pombe 37 2e-06 49.7
Created Date 25-Jun-2016