WERAM Information

Tag Content
WERAM ID WERAM-Art-0022
Ensembl Protein ID AT1G61215.1
Uniprot Accession Q6AWX2; Q6AWX2_ARATH
Genbank Protein ID NP_974063.1
Protein Name At1g61215
Genbank Nucleotide ID NM_202334.1
Gene Name BRD4;At1g61215
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G61215 AT1G61215.1 AT1G61215.1
Details
Type Family Domain Substrates AA References (PMIDs)
Ac_Reader Bromodomain Bromodomain H4K5; H4K8; H4K12; H4K16 K 12466527
Status Reviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 6.80e-11 42.9 278 345
Organism Arabidopsis thaliana
NCBI Taxa ID 3702
Functional Description
(View)
Domain Profile
  Ac_Reader Bromodomain
    BROMO.txt   2 ehevsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkss 70 
                  ++e++ +Fr++ d  ++   Y+++++++mdL+t+++r++    ss++e+ +D+ l+ nNa  ++++++ 
  AT1G61215.1 278 QNECALVFRRRLDS-QKRGRYKKLVRRHMDLDTVQSRINGCSISSAKELFRDFLLVANNAAIFYSKNTR 345
                  578999********.8*************************************************9875 PP
Protein Sequence
(Fasta)		MVMVMMTTTM ESDWGTWEEL LLGGAVLRHG TGDWTVVADE LRSHSLPEIF TPEICKAKYK 60
DLRKRYVGCK AWFEELKKKR VAELKAALLK SEDSIGSLES KLQSLKSESN DECHQNNYDS 120
SRTLSLEPSP KSEGGGECTS KDTSKDLSSV GSFTQQELTT TNWSPEAKSE APVVIEQEKT 180
KDLLHNDIFE SVYGGGGQVL PSMRKKRGKR KRKDCSVSVG KEVMEVSAVE ESDLFDTSAD 240
IASIYRSKEA ASTSSSQSRG HSLALPKELM KIYNTIAQNE CALVFRRRLD SQKRGRYKKL 300
VRRHMDLDTV QSRINGCSIS SAKELFRDFL LVANNAAIFY SKNTREYKSA VGLRDIVTKS 360
LRHYLTEDHP PHRSSITAGS TKVVVLHQKS TSPSVRTSLA AKKPRTGAHP LKTVVQDMAK 420
TSSRGNKRSV TDLPVSAVKS SAAGKKGTAV RKDGRQANRG LESPALMGRK RNRVR 475
Nucleotide Sequence
(Fasta)		AAGTCTTTCT TCTTTGTTCA AAAACAAACC AATCTTCTTC TTCTTTGCCT TTTGAACAAA 60
ACAAGAAAAA ACAAATAAAA CAAACCACAA CCATCAATTT CTAATTTGTT CCATTTCACA 120
AACGTCGAAC AAATCCAGAC CCTTCGCCAA CTCTTTCTCT CCCACCTCAG ATTTTTCTTT 180
TTCTTTCCTT CTTACTAATT TTGAATTTTA ATTTAATTTT TCTCCCCCAT TTTCTTGTCG 240
GAAAACAGCT TTTCGTGTAA TTTACCTCCG ACACAAACCC ACTCGTAACG GCTTTTTCTG 300
GTTTCTTGTC TTATCATACC AGATTACAAA CTTTTATCTT GGTCTTGGTT TGTTGTCTCT 360
GTCTCTGTTT TTTTTGTTTT TTTTGAGAAT TGAGTGGTCG GAGAAAAAAA GGGAAAATTA 420
GGTGGAAAGC GCTAACATGC GCTTGGGGTG CGTAAGTTAA GTTTTGGGTT TCTTTTTCTT 480
TTTCAAAATC GAGGAGCGCG TAAGGCACAC GCGTGATTAT TATTTTTGAT GGTTATGGTG 540
ATGATGACGA CGACAATGGA GAGTGATTGG GGAACATGGG AGGAGCTTCT TCTCGGCGGC 600
GCTGTTCTCC GTCATGGAAC CGGTGATTGG ACCGTCGTTG CCGACGAACT CCGTTCTCAT 660
TCTTTACCTG AGATTTTCAC ACCTGAGATA TGCAAGGCCA AGTACAAAGA CTTGCGAAAA 720
CGTTATGTGG GATGCAAAGC TTGGTTTGAA GAGCTTAAGA AGAAACGAGT AGCTGAGCTT 780
AAAGCAGCTT TACTTAAATC CGAAGACTCT ATTGGGTCTT TGGAATCAAA GCTTCAGAGT 840
CTGAAGTCAG AAAGTAATGA TGAATGTCAT CAAAACAATT ATGATTCTAG CCGAACGTTA 900
TCACTCGAAC CCTCCCCAAA ATCCGAGGGC GGGGGAGAAT GCACGAGCAA AGATACATCC 960
AAAGACTTGT CATCAGTTGG TAGTTTCACA CAGCAAGAGC TGACCACAAC AAACTGGTCA 1020
CCGGAAGCTA AGTCAGAAGC TCCAGTGGTA ATAGAGCAAG AGAAGACGAA AGACCTATTA 1080
CACAACGACA TTTTCGAGTC AGTGTACGGA GGTGGAGGAC AAGTGCTTCC GAGTATGAGG 1140
AAGAAACGAG GCAAGAGAAA ACGAAAAGAT TGCAGTGTCA GTGTCGGTAA AGAAGTGATG 1200
GAAGTTAGCG CTGTGGAAGA AAGCGATTTG TTTGATACAT CTGCGGATAT TGCTAGCATT 1260
TATAGGAGTA AAGAAGCTGC TTCTACTAGC AGCAGTCAAA GCCGAGGTCA CAGTTTGGCT 1320
TTACCCAAAG AGCTTATGAA GATATACAAC ACTATTGCAC AGAACGAATG TGCACTCGTC 1380
TTCCGTAGAC GGCTTGATAG CCAGAAAAGA GGAAGATACA AGAAATTAGT ACGGAGGCAT 1440
ATGGATTTAG ACACTGTACA ATCAAGAATC AACGGTTGTT CGATATCTTC GGCGAAAGAG 1500
CTTTTTAGGG ACTTTCTTTT GGTGGCGAAC AATGCAGCTA TTTTTTACTC TAAGAACACT 1560
CGAGAATACA AATCCGCGGT GGGACTTAGA GACATTGTTA CCAAGTCTCT AAGACACTAT 1620
TTAACAGAAG ATCATCCTCC TCATCGCAGC AGCATTACTG CTGGAAGCAC AAAGGTTGTG 1680
GTTCTTCATC AGAAATCGAC ATCTCCTTCT GTCCGAACGA GTCTGGCAGC TAAAAAACCA 1740
AGAACCGGGG CGCACCCTCT TAAAACGGTT GTGCAAGATA TGGCAAAGAC TTCAAGTAGG 1800
GGTAACAAAA GGTCTGTTAC GGATTTACCA GTTTCTGCTG TGAAATCCTC GGCAGCGGGT 1860
AAGAAGGGAA CTGCGGTAAG AAAAGACGGT AGACAAGCGA ATCGCGGACT CGAATCTCCT 1920
GCATTGATGG GGAGAAAGCG GAACCGGGTT AGATGATTTT TGTATGAAGG GTTTGTTTCA 1980
TATGTTTTTT GTAGTTAGGC AGAGAAAGCT TATTTGATGT AGTAGTTTAT ATTTGGGTCA 2040
ATCTAATCTG CAGGCATAGA CAGTGATGAA TCATGATCAT TGGTAAAACT AATTGTTAAA 2100
GAAAATGTA
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
--
Interpro

IPR001487--Bromodomain
PROSITE

PS50014--BROMODOMAIN_2
Pfam

PF00439--Bromodomain
Gene Ontology
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0120 scaffold_200471.1 Arabidopsis lyrata 96 0.0 822
WERAM-Brr-0154 Bra031444.1-P Brassica rapa 77 3e-175 612
WERAM-Bro-0071 Bo4g086660.1 Brassica oleracea 75 8e-173 603
WERAM-Thc-0079 EOY28363 Theobroma cacao 48 4e-83 306
WERAM-Glm-0191 GLYMA15G07500.1 Glycine max 44 1e-70 265
WERAM-Prp-0058 EMJ13280 Prunus persica 44 2e-66 250
WERAM-Sot-0030 PGSC0003DMT400028077 Solanum tuberosum 42 4e-64 243
WERAM-Sol-0123 Solyc10g009160.2.1 Solanum lycopersicum 42 1e-63 241
WERAM-Pot-0044 POPTR_0004s03710.1 Populus trichocarpa 44 3e-55 213
WERAM-Met-0107 AES90380 Medicago truncatula 62 3e-40 163
WERAM-Sob-0035 Sb02g036530.1 Sorghum bicolor 52 6e-29 126
WERAM-Zem-0131 GRMZM2G402804_P01 Zea mays 52 1e-28 125
WERAM-Tra-0093 Traes_2DS_86FDBD81F.1 Triticum aestivum 50 9e-28 122
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 48 5e-27 119
WERAM-Sei-0112 Si029233m Setaria italica 51 6e-27 119
WERAM-Amt-0004 ERN03421 Amborella trichopoda 67 8e-27 119
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 47 1e-26 118
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 47 1e-26 118
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 47 1e-26 118
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 47 2e-26 118
WERAM-Aet-0053 EMT30824 Aegilops tauschii 50 2e-26 118
WERAM-Brd-0012 BRADI1G24580.1 Brachypodium distachyon 46 1e-25 115
WERAM-Tru-0068 TRIUR3_26205-P1 Triticum urartu 49 1e-23 108
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 32 2e-15 81.3
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 35 6e-15 79.7
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 36 4e-14 76.6
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 34 1e-13 75.5
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 35 2e-13 75.1
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 33 5e-13 73.6
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 38 5e-12 70.1
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 33 7e-11 66.2
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 36 7e-10 62.8
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 35 3e-07 54.3
WERAM-Drm-0075 FBpp0084763 Drosophila melanogaster 32 7e-07 52.8
WERAM-Nec-0030 EFNCRP00000007772 Neurospora crassa 33 1e-06 52.0
Created Date 25-Jun-2016