Vitis vinifera      Me_Reader      PHD

※ PHD family introduction

    PHD: Distinct from the Royal family is the PHD finger, a well-characterized reader of H3K4me3. It contains a C4HC3 motif that coordinates two zinc ions in a cross-brace manner. Such an arrangement produces a globular domain with a small β-sheet and an α-helix. PHD fingers make extensive contacts with H3K4me3, imparting a high degree of specificity. (1)

Reference
1. Musselman CA, Lalonde ME, Cote J, Kutateladze TG.Perceiving the epigenetic landscape through histone readers. Nat Struct Mol Biol.2012;19(12):1218-27. PMID: 23211769.



There are 41 genes.  Reviewed (0 or Unreviewed (41

No.StatusWERAM IDGene/Alias Name
1
WERAM-Viv-0004
VIT_01s0011g01480
2
WERAM-Viv-0005
VIT_01s0011g06390
3
WERAM-Viv-0006
VIT_01s0026g00150
4
WERAM-Viv-0008
VIT_02s0025g01650
5
WERAM-Viv-0009
VIT_02s0025g03560
6
WERAM-Viv-0010
VIT_03s0038g00160
7
WERAM-Viv-0013
VIT_03s0091g00290
8
WERAM-Viv-0016
VIT_04s0008g01670
9
WERAM-Viv-0019
VIT_04s0044g00940
10
WERAM-Viv-0024
VIT_05s0020g03420
11
WERAM-Viv-0027
VIT_05s0051g00350
12
WERAM-Viv-0031
VIT_06s0004g00530
13
WERAM-Viv-0033
VIT_06s0004g02050
14
WERAM-Viv-0034
VIT_06s0004g03180
15
WERAM-Viv-0037
VIT_06s0009g03800
16
WERAM-Viv-0038
VIT_06s0061g00830
17
WERAM-Viv-0039
VIT_06s0061g00840
18
WERAM-Viv-0040
VIT_06s0061g01180
19
WERAM-Viv-0053
VIT_08s0007g04490
20
WERAM-Viv-0054
VIT_08s0007g07500
21
WERAM-Viv-0057
VIT_08s0040g03340
22
WERAM-Viv-0060
VIT_08s0105g00360
23
WERAM-Viv-0061
VIT_09s0002g01600
24
WERAM-Viv-0066
VIT_10s0116g00160
25
WERAM-Viv-0068
VIT_11s0016g01500
26
WERAM-Viv-0071
VIT_11s0103g00660
27
WERAM-Viv-0077
VIT_12s0035g01980
28
WERAM-Viv-0078
VIT_12s0059g01180
29
WERAM-Viv-0082
VIT_13s0064g00630
30
WERAM-Viv-0083
VIT_13s0067g01000 VITISV_024922
31
WERAM-Viv-0088
VIT_14s0060g01560
32
WERAM-Viv-0090
VIT_14s0066g01450
33
WERAM-Viv-0095
VIT_15s0046g00760
34
WERAM-Viv-0100
VIT_16s0098g00350
35
WERAM-Viv-0102
VIT_16s0098g01510
36
WERAM-Viv-0106
VIT_17s0000g04770
37
WERAM-Viv-0110
VIT_18s0001g01580
38
WERAM-Viv-0112
VIT_18s0001g04040
39
WERAM-Viv-0117
VIT_18s0089g01050
40
WERAM-Viv-0119
VIT_19s0014g00230
41
WERAM-Viv-0120
VIT_19s0014g01500