WERAM Information

Tag Content
WERAM ID WERAM-Viv-0005
Ensembl Protein ID VIT_01s0011g06390.t01
Gene Name VIT_01s0011g06390
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_01s0011g06390 VIT_01s0011g06390.t01 VIT_01s0011g06390.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 7.40e-08 33 91 637
Organism Vitis vinifera
Domain Profile
  Me_Reader PHD
                PHD.txt   3 iClvCgkddegekem 17 
                             C +C+ +++g + m
  VIT_01s0011g06390.t01  91 HCNHCKYVGWGHH-M 104
                            4666666666643.3 PP
                PHD.txt   4 ClvCg.kddegekemvqCdeCddwfHlkCvklp.lsslpegkswyCpsCke 52 
                            C+ Cg kdd+ge+ m+ Cd C+ w H++C ++p  +++p    ++C++C++
  VIT_01s0011g06390.t01 591 CP-CGaKDDDGER-MISCDICEVWQHTRCAQIPnNEEIPH--IFLCNQCEQ 637
                            99.*638888877.*******************3333333..5******97 PP
Protein Sequence
(Fasta)		MSQLDLTGCK KRKRGDRVFR FKTFGEKGYP AEFKGSFREN VAALLEFGHI ESNMSCGMLC 60
WSFQLELHSH PPAHILLFVV EEPIGASTHR HCNHCKYVGW GHHMICNRKY HFVVPSRETE 120
AVFGHDSNYE GPDSRKGERS IVGVEGHAMH GVIHSNGFGH LLCVNGLEMG SDLAGRHIMD 180
FWDRLCTSLR ARKVSIYDIS QKKGMDLRLL HGVAYSKPWF GRWGYGFGRG SFGVTQPMYQ 240
KAIDAIQGMP LCLLIHHLGS SNHDIPLIFS RYQTLSDHSL VTVGNLFHFM LELKSRLPKE 300
TCLDSYNPGI SVETTCRWSP KRVEMAARVI VEALRRAEFR WVSRQEVRDA ARAYIGDTGL 360
LDFVLKSLGN HIVGNYLVRR SLNPVTKVLE YCLEDISTVF PSDEGLAMND SKLKARYKIT 420
RIQLMKDMFY LYKNILKEQK QTVATGIFST IPVAARVILD TKYLIKEYCG GQPSEVKVGL 480
KLYCTVVSRN NDEDDDGIEK ALPPFECIIF KDNSTVNELK LEVERNFREI YWGLRSFCVE 540
SIVNLNAKGS DLVFGLVEAG SELLFEGNDS KVGINNEGIY ESGHNNCTVD CPCGAKDDDG 600
ERMISCDICE VWQHTRCAQI PNNEEIPHIF LCNQCEQEII LFPSLP 646
Nucleotide Sequence
(Fasta)		ATGTCGCAGT TGGACCTAAC TGGCTGCAAG AAAAGGAAGA GAGGAGACAG GGTTTTTAGA 60
TTCAAGACCT TTGGAGAAAA AGGCTACCCT GCTGAGTTCA AAGGCTCCTT CCGTGAAAAT 120
GTGGCGGCCC TCCTTGAATT TGGGCATATA GAGAGTAACA TGAGTTGTGG AATGCTATGC 180
TGGTCGTTTC AGCTCGAGCT TCATAGCCAC CCTCCTGCCC ATATCTTGCT GTTTGTGGTT 240
GAAGAGCCCA TTGGAGCATC CACCCACCGT CACTGCAACC ACTGCAAATA TGTCGGCTGG 300
GGGCACCATA TGATATGCAA TAGGAAGTAT CACTTTGTAG TGCCTTCCAG GGAAACAGAG 360
GCAGTGTTTG GCCATGACAG CAACTATGAA GGGCCTGATT CGAGGAAGGG TGAGAGGAGC 420
ATAGTGGGAG TTGAGGGGCA TGCGATGCAT GGAGTCATTC ACTCCAATGG CTTCGGCCAT 480
TTGCTGTGTG TGAATGGGCT AGAAATGGGC TCAGACTTGG CTGGGCGACA CATCATGGAT 540
TTTTGGGACC GTTTGTGCAC CAGTCTGAGG GCAAGGAAAG TGAGTATATA TGACATTTCA 600
CAGAAGAAAG GCATGGATTT GAGGCTACTC CATGGAGTAG CTTACAGTAA GCCCTGGTTT 660
GGTCGCTGGG GATATGGCTT TGGGCGTGGA AGCTTTGGTG TTACTCAACC AATGTACCAG 720
AAGGCCATAG ATGCTATACA AGGCATGCCA TTGTGCTTAC TCATCCATCA TCTTGGCAGT 780
TCTAACCATG ACATTCCACT CATCTTCTCA AGGTATCAAA CATTATCGGA TCATTCACTG 840
GTGACAGTTG GCAATCTCTT TCATTTCATG TTAGAGCTTA AATCCCGCCT TCCAAAGGAA 900
ACTTGTCTTG ATTCATATAA TCCAGGAATC TCAGTGGAAA CTACTTGTAG ATGGTCTCCA 960
AAGCGAGTTG AAATGGCAGC AAGGGTGATT GTTGAAGCAT TAAGGAGGGC TGAATTTAGG 1020
TGGGTCTCAA GGCAAGAGGT TCGTGATGCT GCTCGGGCCT ACATTGGTGA CACTGGCTTG 1080
CTGGATTTTG TGCTGAAATC CCTGGGAAAC CACATAGTTG GGAATTACTT GGTTCGACGC 1140
AGCTTAAACC CAGTGACAAA AGTTCTGGAG TATTGCTTAG AAGACATCTC CACTGTATTT 1200
CCCAGTGATG AAGGTTTGGC CATGAATGAT TCGAAACTGA AGGCTCGCTA CAAGATCACG 1260
AGGATTCAAC TAATGAAAGA CATGTTCTAC TTGTACAAAA ACATCCTAAA AGAGCAAAAG 1320
CAGACGGTTG CCACAGGGAT ATTTAGTACA ATACCTGTAG CTGCACGGGT AATTCTTGAC 1380
ACCAAATATC TAATCAAAGA ATATTGTGGG GGGCAACCTT CAGAAGTCAA AGTGGGCTTG 1440
AAGCTCTATT GTACAGTTGT ATCACGAAAC AATGATGAGG ATGATGATGG AATAGAAAAG 1500
GCACTTCCAC CATTTGAGTG TATCATCTTC AAAGATAATT CTACCGTCAA TGAGCTTAAG 1560
CTAGAAGTTG AAAGGAACTT TAGAGAGATT TATTGGGGAT TGAGAAGCTT CTGTGTGGAG 1620
TCAATAGTGA ATTTGAATGC CAAGGGATCA GATTTGGTTT TTGGGCTAGT TGAAGCAGGC 1680
AGTGAACTTC TCTTTGAAGG TAATGACAGC AAGGTTGGAA TCAACAATGA GGGGATATAT 1740
GAGAGTGGTC ATAATAACTG CACTGTGGAT TGTCCTTGTG GAGCTAAAGA TGATGATGGT 1800
GAACGAATGA TATCATGTGA TATTTGTGAA GTTTGGCAGC ATACACGGTG TGCTCAGATT 1860
CCAAATAATG AAGAAATTCC ACATATATTT CTCTGCAATC AGTGTGAGCA AGAAATCATA 1920
CTATTTCCTT CTCTACCATA G 1942
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pot-0116 POPTR_0010s11170.1 Populus trichocarpa 66 0.0 872
WERAM-Met-0128 AES96731 Medicago truncatula 64 0.0 825
WERAM-Sol-0060 Solyc04g008420.1.1 Solanum lycopersicum 58 0.0 684
WERAM-Sot-0101 PGSC0003DMT400088327 Solanum tuberosum 63 1e-168 590
WERAM-Sem-0063 EFJ34635 Selaginella moellendorffii 44 2e-145 513
WERAM-Mua-0123 GSMUA_Achr8P22880_001 Musa acuminata 51 5e-113 405
WERAM-Lep-0041 LPERR03G26620.1 Leersia perrieri 34 3e-85 313
WERAM-Orp-0038 OPUNC03G29130.1 Oryza punctata 33 5e-79 293
WERAM-Orm-0043 OMERI03G28610.1 Oryza meridionalis 33 4e-77 286
WERAM-Org-0042 ORGLA03G0412100.1 Oryza glaberrima 33 5e-77 286
WERAM-Zem-0133 GRMZM2G408897_P01 Zea mays 33 1e-76 285
WERAM-Orgl-0031 OGLUM02G34660.1 Oryza glumaepatula 35 2e-76 284
WERAM-Orni-0036 ONIVA03G33470.1 Oryza nivara 33 2e-76 284
WERAM-Brd-0003 BRADI1G10680.1 Brachypodium distachyon 35 5e-76 283
WERAM-Ors-0034 OS03T0716200-01 Oryza sativa 33 1e-75 281
WERAM-Orr-0039 ORUFI03G33320.1 Oryza rufipogon 33 1e-75 281
WERAM-Ori-0032 BGIOSGA009918-PA Oryza indica 33 1e-75 281
WERAM-Sob-0004 Sb01g010120.1 Sorghum bicolor 33 2e-75 280
WERAM-Orbr-0047 OB03G39010.1 Oryza brachyantha 36 4e-75 280
WERAM-Tra-0158 Traes_4DS_4536CBC16.1 Triticum aestivum 35 2e-74 277
WERAM-Tru-0052 TRIUR3_22363-P1 Triticum urartu 35 1e-72 271
WERAM-Orl-0099 KN541009.1_FGP002 Oryza longistaminata 35 2e-70 264
WERAM-Thc-0009 EOX92788 Theobroma cacao 31 4e-70 263
WERAM-Orb-0039 OBART03G31940.1 Oryza barthii 34 4e-70 263
WERAM-Glm-0136 GLYMA12G00570.1 Glycine max 32 4e-69 260
WERAM-Sei-0093 Si026053m Setaria italica 32 2e-68 258
WERAM-Amt-0086 ERM99751 Amborella trichopoda 30 4e-64 243
WERAM-Hov-0098 MLOC_70587.10 Hordeum vulgare 30 8e-38 156
WERAM-Osl-0024 ABO96103 Ostreococcus lucimarinus 29 2e-29 128
WERAM-Mel-0025 EGG01272 Melampsora laricipopulina 45 4e-07 54.3
WERAM-Kop-0001 CAY71222 Komagataella pastoris 45 4e-06 50.8
Created Date 25-Jun-2016