Caenorhabditis elegans      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 13 genes.  Reviewed (5 or Unreviewed (8

No.StatusWERAM IDGene/Alias Name
1
WERAM-Cae-0003
BAZ-2; flt-1; CELE_ZK783.4
2
WERAM-Cae-0012
LIN-49; F42A9.2
3
WERAM-Cae-0038
LEX-1; TBP7; F11A10.1
4
WERAM-Cae-0042
BET2; CELE_F57C7.1
5
WERAM-Cae-0070
BET1; Y119C1B.8
6
WERAM-Cae-0016
swsn-4
7
WERAM-Cae-0027
taf-1
8
WERAM-Cae-0033
pbrm-1
9
WERAM-Cae-0034
swsn-9
10
WERAM-Cae-0039
nurf-1
11
WERAM-Cae-0056
F13C5.2
12
WERAM-Cae-0061
F59E12.1
13
WERAM-Cae-0062
athp-2