WERAM Information

Tag Content
WERAM ID WERAM-Viv-0002
Ensembl Protein ID VIT_00s0203g00110.t01
Gene Name VIT_00s0203g00110
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_00s0203g00110 VIT_00s0203g00110.t01 VIT_00s0203g00110.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 3.40e-50 171.2 160 478
Organism Vitis vinifera
Domain Profile
  HDM JHDM2
              JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.vgilkkkwaeedlkellksieeeeldevtr 90 
                            + g lNLa+klp+ + +pdlgP +y  yG  +e    +++t+l  +  d+vnil y  + ++++ + +++++llk+ + ++  + tr
  VIT_00s0203g00110.t01 160 KSGLLNLAVKLPHEYPKPDLGPCIYISYGSCEELLLADSVTRLSYESYDVVNILAYaTDVPISTEKLSKIRKLLKKHKAQDHSKPTR 246
                            5799****************************************************5589999999999999999999887766555 PP
              JHDM2.txt  98 ekpgalWhifaakdaekirellekvskeqga...evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvq 182
                            ++ ga W++f+++d++k+ e+l+++s+e+g+     +++++pi d+s++ld++++++L+e++ +e+wt+ Q lg+av+ipag+p q++
  VIT_00s0203g00110.t01 362 NSCGAQWDVFRRQDVPKLLEYLREHSNEFGHiygLSKHVVHPILDKSFFLDANHKMQLKEKFKIEPWTFEQHLGEAVMIPAGCPYQIR 449
                            4569***************************987556689************************************************ PP
              JHDM2.txt 183 nlkscvkvaedFvsPEnvkecfrltkeyr 211
                            nlkscv+v  dF+sPEnv+e++r++ e+r
  VIT_00s0203g00110.t01 450 NLKSCVNVVLDFISPENVSESIRMIDELR 478
                            *************************9986 PP
Protein Sequence
(Fasta)		MDHEIGKIKE LQEAANREDS NDNFLYYPTV QGLHDDNLEH FQKHWGRGHP IIVRNVLQGM 60
SDLSWDPIVM FCTYLERSSA KSENDKKAVK ATSCLDWCEV EIDIKQFFLG SLEGRKHTNA 120
WQEKLKLMGW LSSHLFQEQF PAHYDEIIHS LPLQEYMNPK SGLLNLAVKL PHEYPKPDLG 180
PCIYISYGSC EELLLADSVT RLSYESYDVV NILAYATDVP ISTEKLSKIR KLLKKHKAQD 240
HSKPTRIAID LKAASQVNRA SSLFSQNMDE ARLQDRTRER PLLCNGVSTV PWFSAARHDT 300
CDVSVQEGNI ASGEELNSES DSEAAKLSCG TSKNSTKSGG YQKLCQEHMK SSNCLGRKLV 360
ANSCGAQWDV FRRQDVPKLL EYLREHSNEF GHIYGLSKHV VHPILDKSFF LDANHKMQLK 420
EKFKIEPWTF EQHLGEAVMI PAGCPYQIRN LKSCVNVVLD FISPENVSES IRMIDELRLL 480
PQDHKAKEDN LEVKKMTLYS INTAIKEIQN LTCAETRIEL KD 522
Nucleotide Sequence
(Fasta)		ATGGATCATG AAATCGGAAA AATCAAGGAG TTGCAGGAAG CAGCTAATAG AGAAGATTCT 60
AATGACAACT TTTTATATTA CCCCACTGTA CAGGGCCTTC ATGATGATAA TCTTGAACAC 120
TTTCAGAAGC ATTGGGGTAG AGGTCATCCT ATAATAGTCC GTAATGTCCT TCAGGGTATG 180
TCGGATTTGA GTTGGGATCC AATTGTTATG TTCTGCACTT ACCTGGAAAG GAGCAGTGCC 240
AAATCTGAGA ATGACAAGAA AGCTGTTAAA GCTACCAGTT GCTTGGATTG GTGTGAGGTA 300
GAAATTGATA TTAAGCAGTT CTTTTTGGGG TCTCTGGAGG GGCGGAAGCA TACAAATGCA 360
TGGCAAGAGA AGCTGAAATT GATGGGTTGG CTTTCTTCCC ATTTATTTCA AGAACAGTTT 420
CCCGCTCATT ATGATGAAAT CATCCATTCT CTACCCCTTC AAGAATACAT GAATCCCAAG 480
TCTGGGCTTC TAAACCTTGC TGTGAAGTTG CCACATGAAT ATCCAAAGCC TGACCTAGGT 540
CCATGTATCT ACATCTCGTA TGGCAGTTGC GAGGAACTAC TACTAGCTGA TTCTGTGACA 600
AGACTGTCTT ATGAGTCCTA TGATGTGGTA AATATTTTGG CATATGCTAC AGATGTTCCA 660
ATTTCCACAG AAAAGCTTTC TAAAATAAGG AAGTTACTGA AAAAACACAA GGCTCAAGAT 720
CATAGCAAGC CTACGAGGAT AGCTATTGAT TTGAAAGCAG CAAGTCAAGT GAACAGAGCA 780
TCATCATTGT TTAGTCAAAA CATGGATGAA GCCAGACTAC AGGATAGGAC AAGAGAAAGA 840
CCACTATTAT GCAATGGAGT GTCTACAGTA CCATGGTTCT CTGCTGCCAG ACATGACACA 900
TGTGATGTCA GTGTCCAAGA AGGAAATATT GCCAGTGGTG AGGAACTTAA TTCGGAATCT 960
GATTCTGAAG CAGCTAAACT TTCTTGTGGA ACATCTAAGA ACTCTACAAA ATCAGGAGGA 1020
TATCAGAAAT TGTGTCAGGA ACACATGAAA AGCTCAAATT GTTTGGGAAG GAAATTAGTG 1080
GCCAATTCTT GTGGTGCCCA ATGGGATGTC TTTCGCAGAC AAGATGTTCC AAAGCTTCTA 1140
GAATATCTCA GAGAACATTC TAATGAGTTT GGCCACATTT ATGGATTGTC AAAGCATGTT 1200
GTTCATCCAA TTCTTGACAA GAGTTTCTTC CTGGATGCAA ATCACAAAAT GCAGCTAAAG 1260
GAGAAATTCA AAATTGAACC ATGGACTTTT GAGCAACACC TTGGAGAAGC TGTCATGATT 1320
CCTGCTGGGT GCCCATATCA GATTAGGAAC CTTAAGTCTT GCGTAAATGT GGTTTTGGAC 1380
TTTATCTCAC CTGAAAATGT TTCCGAGTCC ATCCGCATGA TTGATGAACT CCGCCTACTT 1440
CCACAAGATC ATAAAGCCAA AGAAGACAAC CTGGAGGTGA AGAAAATGAC CTTGTACTCT 1500
ATCAATACAG CAATCAAAGA AATCCAAAAT CTTACATGTG CAGAGACCAG AATTGAACTC 1560
AAAGACTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Prp-0024 EMJ14883 Prunus persica 59 3e-180 629
WERAM-Thc-0080 EOY28452 Theobroma cacao 57 1e-164 577
WERAM-Pot-0124 POPTR_0011s04100.1 Populus trichocarpa 55 1e-155 547
WERAM-Sol-0028 Solyc02g079300.2.1 Solanum lycopersicum 54 2e-153 540
WERAM-Glm-0168 GLYMA13G32110.2 Glycine max 53 7e-152 534
WERAM-Met-0108 AES90468 Medicago truncatula 52 3e-146 515
WERAM-Amt-0077 ERM98415 Amborella trichopoda 43 8e-117 418
WERAM-Orgl-0016 OGLUM01G49660.1 Oryza glumaepatula 43 3e-112 402
WERAM-Orr-0028 ORUFI02G39830.1 Oryza rufipogon 43 1e-111 401
WERAM-Ori-0030 BGIOSGA009342-PA Oryza indica 43 2e-111 400
WERAM-Orm-0031 OMERI02G35990.1 Oryza meridionalis 43 2e-111 400
WERAM-Orni-0028 ONIVA02G41010.1 Oryza nivara 43 2e-111 400
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 43 3e-111 399
WERAM-Orb-0029 OBART02G38100.1 Oryza barthii 43 3e-111 399
WERAM-Orp-0027 OPUNC02G35390.1 Oryza punctata 43 4e-111 399
WERAM-Orl-0018 KN538711.1_FGP007 Oryza longistaminata 43 7e-111 398
WERAM-Org-0029 ORGLA02G0333900.1 Oryza glaberrima 43 9e-111 398
WERAM-Arl-0098 fgenesh2_kg.6__ 3604__ AT4G00990.1 Arabidopsis lyrata 43 2e-109 393
WERAM-Php-0099 PP1S430_29V6.1 Physcomitrella patens 42 1e-108 390
WERAM-Orbr-0035 OB02G45020.1 Oryza brachyantha 41 4e-108 389
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 41 4e-107 385
WERAM-Lep-0033 LPERR02G31600.1 Leersia perrieri 43 5e-107 385
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 41 1e-103 374
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 40 6e-103 372
WERAM-Sei-0128 Si034182m Setaria italica 41 8e-102 368
WERAM-Brr-0004 Bra000935.1-P Brassica rapa 41 3e-100 363
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 38 4e-100 362
WERAM-Tra-0254 Traes_6AS_71DD6D6B2.1 Triticum aestivum 37 3e-96 349
WERAM-Tru-0016 TRIUR3_07101-P1 Triticum urartu 37 2e-95 347
WERAM-Aet-0029 EMT12717 Aegilops tauschii 37 4e-94 342
WERAM-Mua-0155 GSMUA_AchrUn_randomP11860_001 Musa acuminata 35 2e-87 320
WERAM-Sot-0072 PGSC0003DMT400057764 Solanum tuberosum 37 3e-86 316
WERAM-Brd-0031 BRADI1G62640.1 Brachypodium distachyon 34 3e-70 263
WERAM-Bro-0165 Bo9g003800.1 Brassica oleracea 48 1e-57 221
WERAM-Orc-0105 ENSOCUP00000008900.3 Oryctolagus cuniculus 34 5e-23 106
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 37 5e-23 106
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 35 1e-22 105
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 37 2e-22 105
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 37 2e-22 104
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 36 2e-22 104
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 37 2e-22 104
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 37 2e-22 104
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 37 2e-22 104
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 37 2e-22 104
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 37 2e-22 104
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 37 2e-22 104
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 36 2e-22 104
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 37 2e-22 104
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 37 2e-22 104
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 37 2e-22 104
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 37 2e-22 104
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 37 2e-22 104
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 37 2e-22 104
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 37 2e-22 104
WERAM-Soa-0091 ENSSARP00000008521.1 Sorex araneus 37 2e-22 104
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 37 2e-22 104
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 37 2e-22 104
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 37 2e-22 104
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 37 2e-22 104
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 37 2e-22 104
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 37 2e-22 104
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 37 2e-22 104
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 37 2e-22 104
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 37 2e-22 104
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 37 2e-22 104
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 37 3e-22 104
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 37 3e-22 104
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 37 3e-22 104
WERAM-Pes-0047 ENSPSIP00000007045.1 Pelodiscus sinensis 37 3e-22 103
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 37 3e-22 103
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 37 3e-22 103
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 37 3e-22 103
WERAM-Ocp-0022 ENSOPRP00000001989.2 Ochotona princeps 36 4e-22 103
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 37 4e-22 103
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 37 4e-22 103
Created Date 25-Jun-2016