WERAM Information

Tag Content
WERAM ID WERAM-Art-0095
Ensembl Protein ID AT4G00990.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G00990 AT4G00990.1 AT4G00990.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 2.80e-63 214.1 503 798
Organism Arabidopsis thaliana
Domain Profile
  HDM JHDM2
    JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwaeedlkellksieeeeldevt 89 
                  + g lNLa+++p+ +++pdlgPk+y AyG+ +e +r++++t+lh+d+sdavn+l++             +   +kk ae+ l++ + s + +e+ e+ 
  AT4G00990.1 503 KSGILNLATRFPEGSLKPDLGPKTYIAYGFHEELNRGDSVTKLHCDISDAVNVLTHtakveippvkyqnIKVHQKKYAEAMLQKQQYSGQVKEASELE 600
                  5799****************************************************999888777766644444444444444444444444556666 PP
    JHDM2.txt  90 rkrvqdpkek 99 
                  +k +++++e+
  AT4G00990.1 601 NKSMKEVDES 610
                  6666665554 PP
    JHDM2.txt  83 eeldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipag 176
                  +e+d +t++r + ++   ga+W+if+++d++k+ ++l+++ +e+++    + +++ +pihdq+++l+++++k+L+ee+ +e+wt+ Q lg+av+ipag
  AT4G00990.1 668 KETDGNTNERSKAVHG--GAVWDIFRREDVPKLIQFLKRHEHEFRHfnnePLESVIHPIHDQTMFLSDSQKKQLKEEFDIEPWTFEQHLGEAVFIPAG 763
                  3677788887776665..***************************98876667799****************************************** PP
    JHDM2.txt 177 apHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                  +pHqv+n +sc+kva dFv PE v+ec+rlt+e+r
  AT4G00990.1 764 CPHQVRNRQSCIKVALDFVAPESVEECLRLTQEFR 798
                  *********************************98 PP
Protein Sequence
(Fasta)		MEKMRGKRIR PRDSGELVED GRSESERKTR KKENDVVSKG RIGRGRGRGE VSKRSIEIDI 60
SNPEKDIKPD GSRKCLGSTC HHCKILTSES DLIFCSKCNK KCYCFDCIKR SYSERTHEEV 120
RAACPFCMMT CICRACLRLP LVIKPPSEKD TDVKLKQLQY LLVKVLPVLK DIYTEQNREL 180
EIESTIRGHP VTEANIKRCK LDPSERIYCD LCRTSIANFH RSCPNKNCSV DICLSCCKEL 240
SEGFHQERDG KKNAEGKGYE CRIPAGQGKD SDAYVPLHFS TWKLNSDSSI PCPPKECGGC 300
GTSTLELRRL WKRDWVEKLI TNAEKCTLNF RPTDVDIVHE CSSCSTNSDS IRRQAAFRKN 360
AHDNFLYSPN AVDLAEDDIA HFQFHWMKAE PVIVRNVLEK TSGLSWEPMV MWRACREMDP 420
KRKGTEEETT KVKALDCLDW CEVEINLHQF FEGYLEGRMH KNGWPEMLKL KDWPPSDLFE 480
KRLPRHNAEF IAALPFFDYT DPKSGILNLA TRFPEGSLKP DLGPKTYIAY GFHEELNRGD 540
SVTKLHCDIS DAVNVLTHTA KVEIPPVKYQ NIKVHQKKYA EAMLQKQQYS GQVKEASELE 600
NKSMKEVDES KKDLKDKAAN EEQSNNSSRP SGSGEAEKVI ISKEDNPTQP AVSTSVESIQ 660
EQKLDAPKET DGNTNERSKA VHGGAVWDIF RREDVPKLIQ FLKRHEHEFR HFNNEPLESV 720
IHPIHDQTMF LSDSQKKQLK EEFDIEPWTF EQHLGEAVFI PAGCPHQVRN RQSCIKVALD 780
FVAPESVEEC LRLTQEFRRL PKDHSSSEDK LELKKIALYA ASSAIREVKG LMQSSRRSDT 840
Nucleotide Sequence
(Fasta)		GAATTAACGA CGTTCGAAGA AACTCCAGAG GTCTCTTCAT TTTCCTTTTG TATACTGGTA 60
AAAATTGGTG GTCTCTTCTT TGTCTCCGAG TATGGAGAAA ATGAGAGGGA AGCGAATCAG 120
ACCAAGAGAT TCCGGCGAGT TAGTCGAAGA TGGGAGATCT GAAAGCGAGC GTAAGACGAG 180
GAAGAAAGAG AATGATGTTG TGAGCAAAGG AAGAATCGGA AGAGGAAGAG GAAGAGGAGA 240
GGTTTCGAAG CGATCTATTG AAATAGACAT TTCTAATCCC GAGAAGGATA TTAAGCCTGA 300
CGGAAGCAGA AAGTGTTTGG GTTCGACGTG TCATCATTGT AAGATCTTGA CGAGTGAGAG 360
TGATCTTATC TTCTGTTCAA AGTGTAACAA GAAGTGTTAT TGCTTTGACT GCATCAAGAG 420
ATCGTATTCA GAAAGAACAC ATGAGGAAGT TAGAGCTGCT TGTCCATTCT GTATGATGAC 480
TTGCATTTGC AGAGCTTGTT TGCGGTTGCC TTTGGTTATC AAGCCTCCAA GTGAAAAAGA 540
TACAGATGTC AAGCTTAAGC AGCTGCAGTA TCTGTTAGTC AAAGTTCTCC CAGTTCTTAA 600
GGATATTTAT ACGGAGCAGA ACCGTGAACT AGAGATTGAA TCAACAATTA GAGGACACCC 660
TGTGACAGAA GCTAATATCA AGAGGTGCAA ACTTGACCCA AGCGAACGCA TATACTGTGA 720
TCTCTGCCGC ACATCCATTG CCAATTTTCA CAGAAGCTGT CCGAACAAAA ATTGTTCAGT 780
CGATATATGT CTTTCTTGCT GCAAGGAACT AAGTGAGGGC TTCCATCAAG AGAGAGATGG 840
GAAGAAAAAT GCAGAAGGGA AAGGATATGA ATGTCGAATC CCAGCAGGTC AAGGAAAAGA 900
CTCGGACGCA TATGTTCCAC TGCATTTCTC GACTTGGAAG CTTAACTCAG ACAGTAGCAT 960
TCCATGCCCT CCAAAAGAGT GTGGTGGTTG TGGTACTTCA ACACTGGAGT TGAGACGCTT 1020
ATGGAAAAGA GATTGGGTTG AAAAATTAAT AACGAATGCC GAGAAATGTA CTCTGAATTT 1080
TAGGCCAACA GATGTGGATA TTGTTCATGA ATGTTCCTCA TGCTCTACCA ATTCTGATTC 1140
CATTAGAAGG CAGGCAGCTT TTAGGAAGAA TGCTCATGAT AATTTCTTAT ACTCCCCAAA 1200
TGCTGTTGAT CTGGCTGAAG ACGATATTGC TCATTTTCAG TTTCATTGGA TGAAGGCAGA 1260
ACCTGTGATA GTCAGAAATG TTCTCGAGAA GACATCTGGA CTAAGTTGGG AACCAATGGT 1320
TATGTGGAGG GCTTGTAGGG AAATGGATCC AAAGCGTAAA GGTACAGAAG AAGAGACAAC 1380
AAAAGTGAAA GCTTTGGATT GCTTGGACTG GTGTGAGGTT GAAATAAATC TGCATCAGTT 1440
TTTTGAGGGC TACTTAGAAG GCCGCATGCA TAAAAACGGT TGGCCAGAAA TGTTGAAATT 1500
GAAGGACTGG CCTCCCTCAG ATTTATTTGA AAAGCGCCTT CCAAGGCATA ATGCTGAGTT 1560
TATTGCCGCA TTGCCTTTCT TTGATTACAC TGACCCAAAG TCTGGTATCC TAAATCTCGC 1620
AACAAGATTT CCGGAAGGAT CCTTGAAGCC AGATCTTGGA CCCAAGACAT ACATTGCGTA 1680
CGGTTTCCAT GAAGAGCTTA ATAGAGGAGA TTCGGTGACA AAACTTCATT GTGACATTTC 1740
TGACGCGGTC AATGTGTTGA CACACACAGC TAAAGTGGAA ATCCCTCCCG TCAAATACCA 1800
AAACATAAAA GTACATCAGA AAAAATATGC AGAAGCCATG TTGCAGAAAC AACAATACAG 1860
TGGTCAAGTG AAAGAAGCCA GCGAACTTGA AAACAAGTCA ATGAAAGAAG TGGATGAAAG 1920
TAAAAAGGAT TTAAAAGACA AGGCAGCTAA CGAAGAACAA TCAAATAACA GTTCAAGACC 1980
GTCGGGCTCA GGAGAAGCTG AGAAAGTAAT TATTTCAAAA GAGGATAATC CCACACAACC 2040
TGCTGTGAGT ACAAGTGTGG AATCCATACA AGAACAGAAG CTGGATGCTC CAAAAGAAAC 2100
TGATGGCAAT ACCAATGAGA GGTCAAAGGC TGTGCATGGT GGTGCTGTCT GGGATATCTT 2160
TCGAAGAGAG GATGTTCCAA AACTTATTCA GTTTTTGAAA AGGCACGAGC ATGAGTTTCG 2220
TCACTTCAAT AACGAACCCC TGGAATCCGT TATTCACCCA ATTCATGACC AGACTATGTT 2280
CTTGAGTGAT AGCCAGAAGA AACAGCTGAA AGAAGAATTT GATATAGAAC CATGGACCTT 2340
TGAGCAACAC CTCGGCGAAG CAGTCTTCAT ACCTGCAGGT TGTCCTCACC AAGTGAGGAA 2400
TAGACAGTCT TGCATAAAGG TGGCACTAGA CTTTGTGGCT CCTGAAAGCG TCGAAGAATG 2460
CCTTAGGCTA ACACAGGAGT TCCGGAGATT GCCTAAAGAC CACAGTTCTA GCGAGGATAA 2520
ATTGGAGCTT AAGAAAATTG CACTGTATGC TGCGAGTTCA GCCATAAGAG AGGTAAAAGG 2580
GCTAATGCAA AGCTCCCGAC GCAGTGATAC CTAACAAATG ACAAGGAAAA GTTCCCAAGT 2640
TTATTTTATC CCTAAACTAT TCCTACGCAG TTGACTTGTT GTAACTTCCT CTACTTTAAA 2700
ATAGTAGAGT TGGATAGAGT GTAATGTATA ATTACCATGA TTACCGAGTA GTAGAATTAT 2760
GTAAAAGAAT CTGTTAACTT CAAGTTTTAA TCAACATGTT GCTT 2805
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0098 fgenesh2_kg.6__ 3604__ AT4G00990.1 Arabidopsis lyrata 88 0.0 1439
WERAM-Brr-0005 Bra000936.1-P Brassica rapa 59 0.0 905
WERAM-Met-0165 KEH24644 Medicago truncatula 53 0.0 810
WERAM-Viv-0094 VIT_15s0046g00340.t01 Vitis vinifera 52 0.0 805
WERAM-Prp-0006 EMJ21777 Prunus persica 52 0.0 774
WERAM-Thc-0038 EOY23556 Theobroma cacao 51 0.0 766
WERAM-Pot-0147 POPTR_0015s01510.1 Populus trichocarpa 51 0.0 760
WERAM-Bro-0050 Bo3g054370.1 Brassica oleracea 67 0.0 734
WERAM-Sol-0046 Solyc03g083240.2.1 Solanum lycopersicum 50 0.0 711
WERAM-Orbr-0045 OB03G31290.1 Oryza brachyantha 46 0.0 638
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 43 2e-180 630
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 45 8e-179 625
WERAM-Ori-0043 BGIOSGA012927-PA Oryza indica 45 2e-178 623
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 44 4e-178 622
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 44 4e-178 622
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 44 2e-177 620
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 42 3e-176 616
WERAM-Lep-0033 LPERR02G31600.1 Leersia perrieri 43 4e-176 615
WERAM-Sei-0128 Si034182m Setaria italica 44 1e-175 614
WERAM-Glm-0245 GLYMA19G12090.1 Glycine max 45 3e-175 613
WERAM-Aet-0028 EMT26740 Aegilops tauschii 43 8e-174 608
WERAM-Orb-0029 OBART02G38100.1 Oryza barthii 44 1e-173 607
WERAM-Orni-0109 ONIVA10G14230.1 Oryza nivara 45 3e-173 606
WERAM-Orgl-0016 OGLUM01G49660.1 Oryza glumaepatula 43 4e-173 606
WERAM-Tra-0032 Traes_1DS_20D6E2B0D.1 Triticum aestivum 43 5e-173 605
WERAM-Orm-0031 OMERI02G35990.1 Oryza meridionalis 43 7e-172 602
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 43 3e-170 596
WERAM-Mua-0155 GSMUA_AchrUn_randomP11860_001 Musa acuminata 42 2e-168 590
WERAM-Orp-0027 OPUNC02G35390.1 Oryza punctata 43 4e-168 589
WERAM-Orr-0028 ORUFI02G39830.1 Oryza rufipogon 43 1e-162 571
WERAM-Amt-0068 ERN16983 Amborella trichopoda 40 9e-156 548
WERAM-Orl-0018 KN538711.1_FGP007 Oryza longistaminata 42 3e-155 546
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 42 6e-154 542
WERAM-Tru-0041 TRIUR3_19822-P1 Triticum urartu 40 8e-138 488
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 46 3e-31 134
WERAM-Xet-0113 ENSXETP00000038986.2 Xenopus tropicalis 47 3e-31 134
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 46 3e-31 134
WERAM-Soa-0091 ENSSARP00000008521.1 Sorex araneus 46 4e-31 134
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 46 4e-31 134
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 46 4e-31 134
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 46 4e-31 134
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 46 4e-31 134
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 46 4e-31 134
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 46 4e-31 134
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 46 4e-31 134
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 46 4e-31 134
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 46 4e-31 134
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 46 4e-31 134
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 46 4e-31 134
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 46 4e-31 134
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 46 4e-31 134
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 46 4e-31 134
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 46 4e-31 134
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 46 4e-31 134
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 46 5e-31 134
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 46 5e-31 134
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 46 5e-31 134
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 46 5e-31 134
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 45 5e-31 134
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 46 5e-31 134
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 46 5e-31 134
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 46 5e-31 134
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 46 5e-31 134
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 45 5e-31 134
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 46 6e-31 133
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 46 6e-31 133
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 46 7e-31 133
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 46 7e-31 133
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 46 7e-31 133
WERAM-Ran-0048 ENSRNOP00000041218.4 Rattus norvegicus 42 8e-31 133
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 45 1e-30 132
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 45 1e-30 132
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 45 1e-30 132
WERAM-Pes-0047 ENSPSIP00000007045.1 Pelodiscus sinensis 43 1e-30 132
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 45 1e-30 132
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 45 1e-30 132
Created Date 25-Jun-2016