WERAM Information

Tag Content
WERAM ID WERAM-Bro-0050
Ensembl Protein ID Bo3g054370.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo3g054370 Bo3g054370.1 Bo3g054370.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 6.80e-66 223.4 544 945
Organism Brassica oleracea
Domain Profile
  HDM JHDM2
     JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy...vgilkkkwaeedlkellksieee..eldevtrkrvqdp 96 
                   + g lNLa++lp+ +++pdlgPk+y AyG+ +e d ++++t+lh+d+sdavn+l++   v+i+  +++  ++++l k+   +  e+ e  +k v+++
  Bo3g054370.1 544 KSGLLNLATRLPEESLKPDLGPKTYIAYGFPEELDGGDSVTKLHCDMSDAVNVLTHtakVDIPSWQHKLVKKAKLRKQQSGQetEASECENKSVKEV 640
                   5789*****************************************************9999999998888877776655433337888899999998 PP
     JHDM2.txt  97 kekpgal 103
                    ++++al
  Bo3g054370.1 641 VNEEAAL 647
                   8888887 PP
     JHDM2.txt  93 vqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlk 185
                     +  ++ ga+W+if+++d++k+ e+le++++e+++    +v+++ +pihdq+++l+++++k+L+ee+ +e+wt+vQ lg+av+ipag+pHqv+n++
  Bo3g054370.1 823 ESSEAVHGGAVWDIFRREDVPKLIEYLERHKHEFRHffnePVESVTHPIHDQTLFLTESQKKQLKEEFDIEPWTFVQHLGEAVFIPAGCPHQVRNIQ 919
                   334456789**************************9999888999**************************************************** PP
     JHDM2.txt 186 scvkvaedFvsPEnvkecfrltkeyr 211
                   sc+kva dFv PE ++ec+rlt+e+r
  Bo3g054370.1 920 SCIKVALDFVAPESLEECLRLTQEFR 945
                   ************************98 PP
Protein Sequence
(Fasta)		MEKRIRSDDS DESEELRSDK RRNTRKKDTD GVSIGSPSSE GIGRGRGKGR GRGRGRGRKS 60
DGGDNSKRIG SDDSNDSDRL KEHRSEGVVS IESLSSEGQG RGRGRGRGRK SDGGEGSRRT 120
AERRGRERVV STPNKDDNSD GTKKYVGLTC HQCKNLTDKV DLVFCSKCIK KRYCYDCIKR 180
WYPERTPEEV RDACPFCVGN CNCRACLRQP LLVKQPSEKD ANVKLKQLQY LLVKALPVLR 240
DIYAEQNREL EVESAIRGVP VTESDITRSE LHPSERIYCD LCSTSIANFH RSCLNPDCSS 300
DICLSCCKEL RESSHDEKGD GENLSDWKLN PDGSIPCPPK ERRGCGTSTL ELRRLCECDR 360
VEKLITNAEE VTLQFRPPDV NIAHECSSCT SIISRQAAFR KNGHDNFLYC PNAVDLAEGD 420
IAHFQSHWMR AEPVIVRNVL DKTPGLSWDP MVMWRACREM DPKAKCKEEA KSVKALDCLD 480
WCEVEINIHQ FFQGYLKGRQ DSSGMPVMLK LKDWPPSTLF EERLPRHNAE FISSLPFSDY 540
TDPKSGLLNL ATRLPEESLK PDLGPKTYIA YGFPEELDGG DSVTKLHCDM SDAVNVLTHT 600
AKVDIPSWQH KLVKKAKLRK QQSGQETEAS ECENKSVKEV VNEEAALKKW DGLVGEETLK 660
DKAANEEPSN SSSRPSSSQE VDKMFVSKGE CTKTERDDPV EGSCSSKSGH DPKADAGLIN 720
EPIAGENNSE VCLKTERLSP TNQSEDDPTV ENGLMMPTAL STAPLDTDGS LPQPVESIKE 780
EKLDSPKETE GNVTQSLDGS TSAESIQEQK HDAPKETNGN ANESSEAVHG GAVWDIFRRE 840
DVPKLIEYLE RHKHEFRHFF NEPVESVTHP IHDQTLFLTE SQKKQLKEEF DIEPWTFVQH 900
LGEAVFIPAG CPHQVRNIQS CIKVALDFVA PESLEECLRL TQEFRRLPKD HRSNEDKLEL 960
KKIVLHAASS AIREAQDLMQ NSMTE 985
Nucleotide Sequence
(Fasta)		ATGGAGAAGC GAATTAGATC AGATGATTCC GACGAGTCAG AAGAACTTCG ATCTGACAAG 60
CGACGTAATA CGAGGAAGAA AGATACGGAT GGTGTGAGCA TAGGCTCTCC GAGCTCTGAG 120
GGAATAGGTA GAGGTAGAGG AAAAGGAAGA GGGAGAGGAA GAGGGAGAGG AAGAAAATCT 180
GACGGTGGGG ATAATTCGAA GCGAATTGGA TCAGATGATT CCAACGACTC AGATAGGCTC 240
AAAGAACATA GATCTGAAGG TGTTGTGAGC ATAGAATCTC TGAGTTCTGA GGGCCAGGGA 300
AGAGGGAGAG GGAGAGGGAG AGGGAGAAAA TCTGACGGTG GAGAGGGCTC GAGGCGAACT 360
GCTGAAAGAA GAGGGAGAGA GAGAGTCGTG TCTACGCCCA ACAAGGATGA TAACTCTGAT 420
GGAACAAAAA AGTATGTGGG TTTGACTTGC CATCAGTGCA AGAACCTAAC GGATAAGGTT 480
GATCTCGTCT TCTGTTCTAA ATGCATCAAG AAGCGCTATT GCTATGACTG CATCAAGCGA 540
TGGTATCCAG AGAGAACGCC TGAGGAAGTT AGAGATGCAT GTCCTTTCTG TGTCGGGAAT 600
TGCAACTGCA GAGCTTGTTT GCGTCAGCCT TTGCTTGTCA AGCAACCAAG TGAGAAGGAC 660
GCTAATGTCA AGCTCAAGCA GTTGCAGTAC CTATTAGTTA AAGCTCTTCC TGTTCTTAGG 720
GATATTTATG CAGAGCAAAA CCGTGAATTA GAGGTTGAAT CAGCAATTAG AGGAGTCCCT 780
GTGACAGAAT CTGATATTAC TAGGTCCGAA CTTCATCCTA GTGAACGCAT ATACTGTGAC 840
CTGTGCAGCA CATCCATCGC CAATTTTCAC AGAAGCTGTC TGAACCCAGA TTGCTCTTCC 900
GACATTTGTC TTTCTTGCTG CAAGGAACTT AGAGAGAGTT CACATGATGA GAAGGGAGAT 960
GGGGAGAACT TGTCTGACTG GAAGCTTAAT CCTGACGGTA GCATTCCATG CCCTCCCAAA 1020
GAGCGTCGTG GCTGTGGCAC TTCAACTCTG GAGTTGAGAC GTTTGTGCGA ATGTGATAGG 1080
GTTGAAAAGC TGATAACGAA TGCAGAGGAA GTTACTCTGC AGTTTAGGCC ACCAGATGTG 1140
AATATTGCTC ATGAATGTTC CTCATGCACT TCCATCATCA GTAGGCAGGC GGCGTTCAGG 1200
AAGAATGGTC ATGATAACTT TTTGTACTGC CCAAATGCTG TTGATCTGGC TGAAGGCGAC 1260
ATTGCTCATT TTCAGTCGCA TTGGATGAGG GCGGAACCTG TGATAGTCAG AAATGTTCTC 1320
GACAAGACAC CTGGACTAAG TTGGGATCCA ATGGTTATGT GGAGGGCTTG TAGGGAAATG 1380
GATCCAAAAG CTAAATGCAA AGAAGAGGCA AAAAGCGTGA AAGCTTTGGA TTGCTTGGAC 1440
TGGTGTGAGG TTGAAATAAA TATTCATCAG TTTTTTCAAG GCTACTTGAA AGGCCGCCAG 1500
GATTCCAGTG GTATGCCAGT AATGTTGAAG TTAAAGGATT GGCCTCCTTC AACTTTATTT 1560
GAAGAGCGCC TTCCAAGGCA TAATGCTGAG TTTATTTCTT CCTTACCTTT CTCGGATTAC 1620
ACTGACCCAA AGTCAGGTCT CTTGAATCTG GCAACAAGAC TTCCTGAAGA ATCCTTGAAG 1680
CCAGATCTTG GACCCAAGAC ATACATTGCA TACGGTTTCC CTGAAGAGCT TGATGGAGGA 1740
GATTCTGTGA CAAAACTACA TTGTGATATG TCCGACGCGG TCAATGTGCT GACACACACA 1800
GCTAAAGTTG ATATACCTTC CTGGCAACAC AAACTTGTAA AAAAAGCAAA GTTGCGTAAA 1860
CAACAGTCTG GTCAAGAGAC AGAAGCCAGT GAATGTGAAA ACAAGTCAGT GAAAGAAGTA 1920
GTGAATGAGG AAGCTGCTTT AAAGAAATGG GATGGTCTTG TGGGAGAAGA GACTTTAAAG 1980
GACAAGGCAG CTAACGAAGA ACCATCAAAT AGCAGCTCGA GACCGTCCAG CTCACAAGAA 2040
GTTGATAAGA TGTTTGTTTC AAAAGGTGAA TGTACCAAAA CTGAAAGAGA TGATCCTGTG 2100
GAAGGGTCTT GTAGTTCGAA GTCAGGTCAT GATCCAAAGG CGGATGCTGG TTTGATAAAC 2160
GAACCAATCG CTGGTGAGAA TAATAGTGAA GTATGTTTGA AGACGGAGAG ATTATCTCCA 2220
ACGAACCAGA GTGAAGATGA TCCCACGGTG GAGAACGGAC TTATGATGCC AACAGCTCTT 2280
TCAACTGCCC CGTTGGACAC AGATGGTAGT CTCCCGCAGC CTGTGGAATC CATAAAAGAG 2340
GAGAAACTGG ATTCTCCAAA GGAAACTGAG GGCAATGTCA CTCAGAGTTT GGATGGTAGT 2400
ACAAGTGCGG AGTCCATACA AGAGCAGAAA CATGATGCTC CAAAAGAAAC TAATGGCAAT 2460
GCCAATGAGA GTTCAGAGGC TGTGCATGGT GGTGCTGTGT GGGACATCTT TCGAAGAGAG 2520
GATGTTCCAA AACTTATTGA GTATTTGGAA AGACACAAGC ATGAGTTTCG CCATTTCTTT 2580
AACGAACCTG TGGAATCTGT TACTCACCCA ATTCATGACC AGACCTTGTT CTTGACTGAA 2640
AGCCAGAAGA AACAGCTGAA AGAGGAGTTC GATATAGAGC CATGGACATT TGTGCAACAC 2700
CTCGGCGAAG CTGTTTTTAT CCCTGCAGGT TGTCCTCACC AAGTTAGAAA TATACAGTCA 2760
TGCATAAAGG TGGCACTAGA TTTTGTTGCT CCTGAAAGCT TAGAGGAGTG CCTTAGGCTA 2820
ACACAGGAGT TCCGGAGACT ACCAAAAGAC CACAGATCCA ATGAAGATAA ACTAGAGCTT 2880
AAGAAAATAG TGCTGCATGC TGCCAGCTCA GCCATAAGAG AGGCACAAGA TCTAATGCAA 2940
AACTCCATGA CAGAATGA 2959
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0005 Bra000936.1-P Brassica rapa 89 0.0 1532
WERAM-Arl-0098 fgenesh2_kg.6__ 3604__ AT4G00990.1 Arabidopsis lyrata 72 0.0 741
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 65 0.0 717
WERAM-Thc-0124 EOX95689 Theobroma cacao 57 3e-177 620
WERAM-Viv-0094 VIT_15s0046g00340.t01 Vitis vinifera 58 4e-176 616
WERAM-Org-0016 ORGLA02G0006900.1 Oryza glaberrima 40 3e-165 580
WERAM-Met-0165 KEH24644 Medicago truncatula 56 2e-162 570
WERAM-Prp-0006 EMJ21777 Prunus persica 54 2e-160 563
WERAM-Pot-0147 POPTR_0015s01510.1 Populus trichocarpa 55 6e-157 552
WERAM-Glm-0182 GLYMA14G26015.1 Glycine max 55 2e-152 537
WERAM-Tru-0016 TRIUR3_07101-P1 Triticum urartu 45 1e-148 525
WERAM-Tra-0254 Traes_6AS_71DD6D6B2.1 Triticum aestivum 45 2e-148 524
WERAM-Amt-0026 ERN14091 Amborella trichopoda 50 3e-140 497
WERAM-Sol-0046 Solyc03g083240.2.1 Solanum lycopersicum 50 2e-139 494
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 52 7e-133 472
WERAM-Sot-0039 PGSC0003DMT400035505 Solanum tuberosum 49 1e-125 448
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 43 3e-122 437
WERAM-Ori-0043 BGIOSGA012927-PA Oryza indica 45 7e-122 436
WERAM-Orbr-0045 OB03G31290.1 Oryza brachyantha 44 5e-120 429
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 44 5e-119 426
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 44 6e-119 426
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 44 3e-118 424
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 44 1e-117 421
WERAM-Sei-0128 Si034182m Setaria italica 42 2e-117 421
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 45 4e-117 420
WERAM-Orb-0037 OBART03G22260.1 Oryza barthii 44 7e-117 419
WERAM-Lep-0033 LPERR02G31600.1 Leersia perrieri 44 4e-116 416
WERAM-Aet-0028 EMT26740 Aegilops tauschii 44 7e-116 416
WERAM-Orni-0109 ONIVA10G14230.1 Oryza nivara 44 1e-115 415
WERAM-Orm-0018 OMERI02G00250.1 Oryza meridionalis 43 6e-114 409
WERAM-Orr-0016 ORUFI02G00790.1 Oryza rufipogon 42 6e-114 409
WERAM-Orp-0036 OPUNC03G20970.1 Oryza punctata 42 6e-112 403
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 43 1e-109 395
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 41 1e-108 392
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 49 3e-33 141
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 49 4e-33 141
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 49 4e-33 140
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 49 4e-33 140
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 49 4e-33 140
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 49 4e-33 140
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 49 5e-33 140
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 49 5e-33 140
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 49 5e-33 140
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 49 5e-33 140
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 47 5e-33 140
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 49 5e-33 140
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 49 5e-33 140
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 49 5e-33 140
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 49 5e-33 140
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 49 6e-33 140
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 49 6e-33 140
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 49 6e-33 140
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 49 6e-33 140
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 49 6e-33 140
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 49 6e-33 140
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 49 6e-33 140
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 49 6e-33 140
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 49 6e-33 140
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 49 6e-33 140
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 49 6e-33 140
WERAM-Soa-0091 ENSSARP00000008521.1 Sorex araneus 49 7e-33 140
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 49 7e-33 140
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 47 7e-33 140
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 49 8e-33 140
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 49 8e-33 140
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 49 1e-32 139
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 49 1e-32 139
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 49 1e-32 139
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 49 1e-32 139
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 48 1e-32 139
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 48 2e-32 139
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 48 2e-32 139
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 48 2e-32 139
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 48 2e-32 139
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 48 2e-32 139
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 49 2e-32 139
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 49 2e-32 138
Created Date 25-Jun-2016