WERAM Information

Tag Content
WERAM ID WERAM-Bro-0165
Ensembl Protein ID Bo9g003800.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo9g003800 Bo9g003800.1 Bo9g003800.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 1.20e-65 222.6 453 846
Organism Brassica oleracea
Domain Profile
  HDM JHDM2
     JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy...vgilkkkwaeedlkel.lksieeeel 85 
                     g lNLa++lp+ +++pdlgPk+y AyG+ +e +r++++t+lh+dvsdavn+l++   v     +  + +  +l ++ +++ +l
  Bo9g003800.1 453 ESGILNLATRLPDGSLKPDLGPKTYIAYGFHEELNRGDSVTKLHCDVSDAVNVLTHttkV---DLTPRQYQRIKLeQRRYAKAQL 534
                   4689****************************************************5552...3332222222220222222222 PP
     JHDM2.txt  78 ksieeeeldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgda 170
                   +si+e++ld     +  +  ++ ga+W+if+++d++k+ e+l+++++e+++    +v+++ +pihdqs++l++ ++k+L+ee+ +e+wt+vQ lg+a
  Bo9g003800.1 709 ESIQEQKLDAPKETNESSKAVHGGAVWDIFRREDVPKLVEYLKRHKHEFRHlynePVKSVSHPIHDQSMFLNERQKKQLKEEFDIEPWTFVQHLGEA 805
                   67888888777777778888999***************************99988888899************************************ PP
     JHDM2.txt 171 vlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                   v+ipag+pHqv+n++sc+kva dFv PE v+ec+rlt+e+r
  Bo9g003800.1 806 VFIPAGCPHQVRNIQSCIKVALDFVAPESVEECLRLTEEFR 846
                   ***************************************98 PP
Protein Sequence
(Fasta)		MEERKGKRIR SEEDPPRSSD KRRKTRKKED ENVLSRRGSS SSEGRRRGRD MSSPDKDESE 60
GTRKYAGLTC HQCKIMMSSK TDLVFCSICI NKRYCKDCIT RWYPERTPEG VKAACPFCMG 120
NCNCRACLRE PLAVKIQSEK DDNVKLKQLQ YLLVKVLPVL RAIYTEQDNE LEIETAIRGV 180
PVTESDVAKC EVHPSVRIYC DLCSTSIANF LRSCQNPNCS SDICLSCCKE LRDGESFSNS 240
DGTIPCPPKE RGGCGTSTLE LRRLRKRDLV QKLITDAEEL TLHTKPQDVD FAHECSSCTA 300
SSRRQAASRK NGHDNFLYSP NALDLAEDDN AHFQSHWIKA EPVIVRNVLE KTSGLSWEPM 360
VMWRACREMD PKANCKGEAK AVKAVDCLDW CEVEINIHQF FDGYLKGRMH CNGWPEMLKL 420
KDWPPSALFE ERLPRHNDEF MSALPFFDYT DPESGILNLA TRLPDGSLKP DLGPKTYIAY 480
GFHEELNRGD SVTKLHCDVS DAVNVLTHTT KVDLTPRQYQ RIKLEQRRYA KAQLRKQQEN 540
KSLGEVDKDE IILIENEEDL KNCNGLLGEQ SLKDKASKEE PSNSIAGPSR SQKGECTKVE 600
RADDPMEGSS SLYSCTGAME SGHDPKVDVG LITQENVTVK YESIADENHD NVCLKTGRLS 660
PSQREADSSV ENELKMPTKE TEMMPTLPST PPWDEEDRPP RPVVSTSAES IQEQKLDAPK 720
ETNESSKAVH GGAVWDIFRR EDVPKLVEYL KRHKHEFRHL YNEPVKSVSH PIHDQSMFLN 780
ERQKKQLKEE FDIEPWTFVQ HLGEAVFIPA GCPHQVRNIQ SCIKVALDFV APESVEECLR 840
LTEEFRRLPK VHRSNEDKLE LKKIVLHAAS SAIREAKKLV QKSKIQ 886
Nucleotide Sequence
(Fasta)		ATGGAGGAAA GGAAGGGTAA GCGGATTAGG TCAGAGGAAG ATCCCCCGAG ATCTTCTGAC 60
AAGCGACGTA AGACGAGGAA GAAGGAAGAT GAGAATGTCC TGAGCAGAAG AGGATCTTCG 120
AGTTCTGAGG GAAGAAGAAG AGGAAGAGAC ATGTCTTCTC CCGACAAGGA TGAGTCTGAA 180
GGAACAAGAA AGTATGCTGG TTTGACTTGT CATCAGTGTA AGATCATGAT GAGTAGTAAG 240
ACTGATCTTG TCTTCTGTTC AATATGTATC AATAAGCGCT ACTGCAAGGA CTGCATCACT 300
AGATGGTATC CAGAGAGAAC ACCCGAGGGA GTTAAAGCTG CTTGTCCTTT CTGTATGGGG 360
AATTGCAACT GCAGAGCTTG TTTGCGAGAG CCTTTGGCCG TCAAGATACA AAGTGAAAAG 420
GATGATAATG TCAAGCTCAA GCAGTTGCAG TACCTATTAG TTAAAGTCCT TCCTGTTCTT 480
AGGGCTATTT ATACAGAGCA GGACAATGAA CTAGAGATTG AAACAGCGAT TAGAGGAGTG 540
CCTGTGACAG AATCTGATGT TGCTAAGTGC GAGGTTCATC CAAGTGTACG CATATACTGT 600
GACCTCTGCA GCACATCCAT TGCCAATTTT CTCAGAAGCT GTCAGAACCC AAATTGTTCT 660
TCCGACATAT GTCTCTCTTG CTGCAAGGAA CTGAGAGATG GCGAGAGTTT CTCTAACTCC 720
GACGGTACCA TTCCCTGCCC ACCAAAGGAA CGTGGTGGTT GTGGTACCTC AACACTGGAG 780
TTGAGACGTT TGCGCAAACG TGATTTGGTC CAAAAACTGA TAACCGATGC AGAGGAACTT 840
ACTCTACACA CTAAACCACA AGATGTGGAT TTTGCTCATG AATGTTCCTC ATGCACTGCC 900
AGTTCTAGAA GGCAAGCTGC TTCTAGGAAG AACGGTCATG ATAACTTCTT ATACTCCCCA 960
AACGCTCTTG ATCTAGCCGA AGACGACAAT GCTCATTTCC AGTCGCATTG GATAAAGGCA 1020
GAGCCTGTTA TAGTCAGAAA CGTTCTGGAG AAGACATCAG GACTAAGCTG GGAGCCAATG 1080
GTTATGTGGA GGGCGTGTAG AGAAATGGAT CCTAAGGCTA ATTGCAAAGG TGAGGCAAAA 1140
GCTGTGAAGG CTGTGGACTG CTTGGACTGG TGTGAGGTTG AGATAAACAT TCATCAGTTT 1200
TTCGATGGCT ACTTAAAAGG GAGAATGCAT TGCAACGGTT GGCCAGAGAT GTTGAAACTG 1260
AAGGATTGGC CTCCATCAGC TTTGTTTGAA GAGCGGCTTC CGAGGCATAA TGATGAGTTC 1320
ATGTCTGCGT TGCCTTTCTT TGATTACACT GATCCAGAGT CTGGTATCTT GAATCTTGCT 1380
ACAAGACTTC CAGATGGATC CTTGAAGCCA GATCTTGGAC CAAAGACGTA CATTGCTTAT 1440
GGTTTCCATG AGGAGCTTAA TAGAGGAGAC TCTGTGACAA AGCTACATTG TGATGTTTCT 1500
GACGCGGTCA ATGTGCTGAC ACACACAACT AAAGTGGATT TAACTCCCAG ACAATACCAA 1560
AGGATAAAAT TAGAACAGAG AAGATATGCA AAAGCACAAT TGCGTAAACA ACAGGAAAAC 1620
AAGTCACTGG GAGAAGTAGA TAAAGATGAA ATAATCTTGA TTGAGAATGA GGAAGATTTA 1680
AAGAATTGCA ATGGTCTTTT GGGGGAACAG AGCTTGAAGG ACAAGGCATC TAAAGAAGAA 1740
CCATCAAACA GCATTGCTGG ACCGTCCAGA TCACAAAAAG GTGAATGTAC TAAAGTTGAA 1800
AGAGCTGATG ATCCTATGGA AGGATCTTCT AGTTTGTATT CTTGCACTGG TGCTATGGAG 1860
TCAGGTCATG ATCCAAAGGT GGATGTGGGT TTGATAACTC AGGAGAATGT AACAGTGAAA 1920
TATGAATCAA TTGCTGACGA GAATCATGAT AACGTCTGTT TGAAGACAGG GAGATTATCT 1980
CCAAGTCAAA GAGAAGCTGA TTCATCCGTG GAGAATGAAC TAAAGATGCC AACAAAGGAA 2040
ACTGAGATGA TGCCAACACT TCCTTCAACT CCCCCGTGGG ATGAAGAAGA TAGGCCCCCA 2100
CGGCCTGTCG TCAGTACAAG TGCGGAATCA ATACAAGAGC AGAAACTAGA TGCTCCAAAA 2160
GAAACAAATG AGAGTTCAAA GGCTGTGCAC GGTGGTGCTG TGTGGGACAT CTTTCGAAGA 2220
GAGGATGTTC CAAAACTTGT TGAGTATTTG AAAAGGCACA AGCATGAGTT TCGTCACCTC 2280
TACAACGAAC CTGTGAAATC TGTGTCACAC CCAATTCATG ACCAAAGTAT GTTCTTGAAT 2340
GAAAGACAGA AGAAACAGCT CAAGGAGGAG TTCGATATAG AACCATGGAC CTTTGTGCAA 2400
CACCTCGGTG AAGCTGTCTT TATCCCTGCA GGTTGTCCTC ACCAAGTGAG GAACATACAG 2460
TCATGCATAA AGGTGGCACT AGATTTTGTT GCCCCTGAAA GCGTAGAGGA ATGTCTTAGG 2520
CTAACAGAGG AGTTCCGGAG ACTACCAAAA GTTCACAGAT CCAACGAAGA TAAACTAGAG 2580
CTTAAGAAGA TAGTGCTGCA TGCTGCCAGC TCAGCCATAA GAGAGGCAAA AAAGCTAGTG 2640
CAAAAGTCCA AGATACAATG A 2662
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0187 Bra037394.1-P Brassica rapa 89 0.0 1470
WERAM-Arl-0098 fgenesh2_kg.6__ 3604__ AT4G00990.1 Arabidopsis lyrata 63 0.0 733
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 61 0.0 718
WERAM-Prp-0030 EMJ21800 Prunus persica 48 0.0 666
WERAM-Thc-0124 EOX95689 Theobroma cacao 53 1e-164 578
WERAM-Viv-0094 VIT_15s0046g00340.t01 Vitis vinifera 53 7e-156 548
WERAM-Brd-0062 BRADI3G01060.1 Brachypodium distachyon 39 3e-146 516
WERAM-Met-0165 KEH24644 Medicago truncatula 53 4e-146 516
WERAM-Lep-0019 LPERR02G00580.1 Leersia perrieri 40 5e-145 512
WERAM-Glm-0182 GLYMA14G26015.1 Glycine max 54 2e-143 507
WERAM-Pot-0147 POPTR_0015s01510.1 Populus trichocarpa 53 4e-143 506
WERAM-Amt-0026 ERN14091 Amborella trichopoda 50 5e-138 489
WERAM-Sob-0062 Sb04g000775.1 Sorghum bicolor 44 1e-136 484
WERAM-Sol-0046 Solyc03g083240.2.1 Solanum lycopersicum 49 1e-130 464
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 49 2e-126 451
WERAM-Sot-0039 PGSC0003DMT400035505 Solanum tuberosum 48 1e-122 438
WERAM-Aet-0028 EMT26740 Aegilops tauschii 44 6e-113 406
WERAM-Tra-0032 Traes_1DS_20D6E2B0D.1 Triticum aestivum 44 8e-113 405
WERAM-Orbr-0035 OB02G45020.1 Oryza brachyantha 42 3e-111 400
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 43 8e-111 399
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 43 1e-108 392
WERAM-Orm-0031 OMERI02G35990.1 Oryza meridionalis 43 6e-108 389
WERAM-Orp-0027 OPUNC02G35390.1 Oryza punctata 42 2e-104 378
WERAM-Orgl-0016 OGLUM01G49660.1 Oryza glumaepatula 44 3e-103 374
WERAM-Orr-0028 ORUFI02G39830.1 Oryza rufipogon 44 4e-103 373
WERAM-Orni-0087 ONIVA08G02050.1 Oryza nivara 41 1e-102 372
WERAM-Ori-0020 BGIOSGA007275-PA Oryza indica 41 1e-102 372
WERAM-Orb-0016 OBART02G00740.1 Oryza barthii 41 1e-102 372
WERAM-Org-0016 ORGLA02G0006900.1 Oryza glaberrima 39 2e-97 354
WERAM-Zem-0041 GRMZM2G054162_P01 Zea mays 40 4e-96 350
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 55 3e-93 340
WERAM-Sei-0062 Si016268m Setaria italica 41 7e-93 339
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 55 4e-88 323
WERAM-Tru-0016 TRIUR3_07101-P1 Triticum urartu 47 2e-87 321
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 48 2e-34 145
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 48 3e-34 144
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 48 4e-34 144
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 48 4e-34 144
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 48 4e-34 144
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 48 5e-34 144
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 48 5e-34 144
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 48 5e-34 144
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 48 5e-34 144
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 48 5e-34 144
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 48 5e-34 144
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 48 5e-34 144
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 48 5e-34 144
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 48 5e-34 144
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 48 5e-34 144
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 48 5e-34 144
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 48 5e-34 144
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 48 5e-34 144
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 48 5e-34 144
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 48 5e-34 144
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 48 6e-34 144
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 48 6e-34 144
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 48 6e-34 144
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 48 6e-34 144
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 48 6e-34 144
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 48 6e-34 143
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 48 6e-34 143
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 48 7e-34 143
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 47 7e-34 143
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 48 7e-34 143
WERAM-Soa-0091 ENSSARP00000008521.1 Sorex araneus 48 8e-34 143
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 47 9e-34 143
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 48 1e-33 143
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 48 1e-33 142
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 48 1e-33 142
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 48 1e-33 142
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 47 1e-33 142
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 47 1e-33 142
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 48 1e-33 142
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 47 1e-33 142
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 47 1e-33 142
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 47 1e-33 142
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 47 2e-33 142
Created Date 25-Jun-2016