WERAM Information

Tag Content
WERAM ID WERAM-Sot-0072
Ensembl Protein ID PGSC0003DMT400057764
Gene Name PGSC0003DMG400022424
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400022424 PGSC0003DMT400057764 PGSC0003DMT400057764
PGSC0003DMG400022424 PGSC0003DMT400057765 PGSC0003DMT400057765
PGSC0003DMG400022424 PGSC0003DMT400057766 PGSC0003DMT400057766
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 5.20e-46 158.4 382 651
Organism Solanum tuberosum
Domain Profile
  HDM JHDM2
             JHDM2.txt   7 gklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvyvgilkkk.waeedlkellksieee 83 
                           g lN+a klp+++++ d+gPk++  yG+ +e ++++++ nlh+++ d+v +lv++   k k w++ ++ ++ k ++e 
  PGSC0003DMT400057764 382 GLLNVAAKLPHYSLQNDVGPKIFLSYGMYEELGKGDSVNNLHINMRDLVFLLVHISEVKLKgWQKTKIGKMEKIFAES 459
                           779****************************************************99887758887776666666555 PP
             JHDM2.txt  77 lksieeeeldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegw 161
                           + ++ +e+l+  + +     +++ galW++f+++d++ + e+l+ + k  g        ++  p+ d  +yl+++++++L+e +G+e+w
  PGSC0003DMT400057764 515 VDNLSHEDLNGSSLNSS--DSSHSGALWDVFRRQDVPMLIEYLRFHWKKHGDsdhvTDDSVPSPLYDGIVYLNEHHKRKLKELFGIEPW 601
                           45666666644444333..33457*******************998887776544444456689************************* PP
             JHDM2.txt 162 tlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                            + Q lg+a++ipag+p qv+nl+s+v++  dF+sPE + e++r+ +e r
  PGSC0003DMT400057764 602 SFEQHLGEAIFIPAGCPFQVRNLQSTVQLGLDFLSPESLGEAVRMAEEIR 651
                           ******************************************99998875 PP
Protein Sequence
(Fasta)		MPVEEIQRIC PACRGSCNCK VCMRGDNLLK VRIREIPAQN KLQYLYSLLS AVLPVVKHIH 60
NQQCFEVELE KKLRGNGMDL GRTKLNADEQ MCCNFCRIPI VDYHRHCSNC SYDLCLSCCK 120
DLRDATKLVQ DDRGKQFLGR ADCRETTSKD VKLSNVHLNI LSKLSDWKAD SNGSIPCPPK 180
QYGGCSSSVL SLKRIFKMNW VAKLVKNVEE MVSGCKVCDS GDLENTSEGK LFQAAHRENG 240
DDNVLYHPLS EDIRSEGIED FRKQWSRGKP VIIKDIYDVS SMSNWDPIEI WRGVRETTEE 300
KTKDDNRTVK AIDCFDGSEI DIQIGQFIRG YSEGRIHENG WPEMLKLKDW PSPSASEEFL 360
LYQRPEFISK LPLLEFIHSK WGLLNVAAKL PHYSLQNDVG PKIFLSYGMY EELGKGDSVN 420
NLHINMRDLV FLLVHISEVK LKGWQKTKIG KMEKIFAESD HKGFPGDALN VSSEGDFSKF 480
SPVGDRGDGQ YADTDSNANE MLVDQESRVT SQTGVDNLSH EDLNGSSLNS SDSSHSGALW 540
DVFRRQDVPM LIEYLRFHWK KHGDSDHVTD DSVPSPLYDG IVYLNEHHKR KLKELFGIEP 600
WSFEQHLGEA IFIPAGCPFQ VRNLQSTVQL GLDFLSPESL GEAVRMAEEI RGLPNTHDAK 660
LQMLEVGKIS LYAASSAIKE VQKLVLDPKV GPELGFEDPN LTALVSENLE KMMKRRQVA 719
Nucleotide Sequence
(Fasta)		CTTAGACCTG AAGTTTCTTT TTGCTCTCCA AGTATTAGAG GTCAACAGTC CGTCATTGTT 60
ATTGCTGGTT GTGTTTGATA TTCTCACTTG GGCTCCTTTG ATTTTTCCCC TAGGAAACCT 120
CTGAAGGGAG CTCCAATTCT TCTGATAATA CAGGGGGGCA ACCTTGTCAT CAATGTAGGC 180
GGAATGATCA CCGAGTAACT TGGTGCCTTA GATGTGATAG AAGGGGCTAC TGTGAAAGCT 240
GCATTTCAAC TTGGTACTCC AACATGCCAG TTGAAGAGAT ACAGAGGATT TGTCCTGCGT 300
GTCGTGGTAG TTGCAATTGT AAAGTGTGTA TGCGGGGAGA CAACTTGTTA AAGGTTAGAA 360
TAAGGGAGAT ACCTGCACAA AACAAATTGC AGTATCTCTA TTCCCTTTTG TCAGCAGTTC 420
TTCCAGTTGT TAAGCACATT CATAATCAAC AGTGCTTTGA GGTGGAACTA GAAAAAAAAC 480
TTCGAGGAAA TGGAATGGAT CTTGGTCGGA CAAAATTGAA TGCAGATGAG CAAATGTGCT 540
GTAATTTCTG CAGGATACCA ATTGTTGATT ACCATAGACA CTGCTCAAAT TGCTCATATG 600
ACCTCTGCCT TAGCTGCTGC AAAGATCTCA GAGATGCAAC CAAGCTTGTG CAGGATGACA 660
GGGGTAAGCA GTTCCTAGGA AGAGCTGATT GCAGAGAAAC CACATCAAAG GACGTGAAAT 720
TGTCAAACGT TCATCTTAAT ATACTTAGCA AGCTTTCTGA TTGGAAAGCA GATAGTAATG 780
GCTCCATACC CTGTCCACCA AAGCAATATG GGGGCTGCAG TTCCTCGGTC TTATCATTGA 840
AACGAATCTT CAAGATGAAT TGGGTAGCGA AACTGGTGAA AAATGTTGAA GAAATGGTTA 900
GTGGATGTAA AGTATGTGAT TCTGGCGATC TAGAGAATAC CTCTGAAGGG AAGTTGTTCC 960
AGGCTGCTCA TAGAGAGAAT GGGGATGATA ATGTTTTGTA CCATCCATTG TCTGAAGATA 1020
TTAGAAGTGA AGGGATTGAG GACTTCAGAA AGCAATGGAG TAGAGGTAAA CCTGTTATCA 1080
TCAAGGATAT ATATGATGTA TCATCGATGT CAAACTGGGA TCCCATTGAG ATATGGAGAG 1140
GGGTAAGGGA GACAACAGAG GAGAAAACAA AAGATGATAA CAGAACTGTG AAGGCCATTG 1200
ATTGTTTTGA TGGGAGTGAG ATTGATATTC AGATTGGTCA ATTCATCAGA GGATACTCAG 1260
AGGGAAGAAT TCATGAGAAT GGTTGGCCAG AAATGCTCAA ATTGAAAGAT TGGCCTTCTC 1320
CTAGTGCTTC AGAAGAGTTC TTGTTGTACC AGAGACCTGA GTTTATTAGT AAACTTCCTT 1380
TACTTGAATT CATTCACTCC AAGTGGGGTC TTCTAAATGT AGCTGCGAAA TTACCTCATT 1440
ATTCCCTGCA GAATGATGTT GGTCCTAAGA TTTTTCTTTC TTATGGGATG TATGAAGAAC 1500
TTGGTAAAGG TGACTCAGTG AACAATCTGC ATATCAACAT GCGTGACCTA GTATTCCTTT 1560
TGGTTCATAT CAGTGAGGTC AAACTGAAAG GTTGGCAGAA GACGAAGATA GGAAAGATGG 1620
AGAAAATCTT TGCTGAATCT GATCACAAAG GATTTCCTGG CGATGCACTA AATGTTTCAA 1680
GCGAAGGGGA TTTCTCCAAA TTTTCACCTG TTGGCGATAG AGGGGATGGT CAGTATGCTG 1740
ATACAGATTC AAATGCCAAT GAAATGTTGG TCGACCAAGA GAGCAGAGTT ACTTCTCAGA 1800
CTGGTGTAGA TAACTTGAGT CATGAAGATC TGAATGGTTC CAGTTTAAAC AGCTCCGACA 1860
GTAGTCACTC TGGAGCTCTT TGGGATGTCT TTCGGAGGCA GGATGTGCCG ATGCTTATCG 1920
AGTATTTAAG ATTTCATTGG AAGAAACATG GAGATTCAGA CCATGTAACG GATGATTCTG 1980
TGCCCAGTCC TCTTTACGAT GGAATAGTAT ATCTGAATGA GCATCATAAG AGAAAGTTGA 2040
AAGAGTTATT TGGAATTGAG CCTTGGTCGT TTGAACAGCA TTTAGGTGAA GCGATTTTCA 2100
TTCCTGCTGG ATGTCCTTTC CAAGTGAGGA ATCTTCAGTC CACTGTCCAA TTGGGCCTTG 2160
ATTTTCTTTC TCCAGAAAGT TTAGGTGAGG CTGTTAGAAT GGCTGAAGAA ATCCGTGGCC 2220
TTCCTAATAC TCATGATGCA AAGCTGCAAA TGTTGGAGGT GGGAAAGATA TCACTTTATG 2280
CAGCAAGCTC AGCCATCAAA GAAGTTCAGA AGTTGGTTCT GGATCCTAAA GTTGGTCCCG 2340
AGCTTGGATT TGAGGATCCC AATTTGACCG CATTGGTGTC AGAGAATTTG GAGAAAATGA 2400
TGAAGAGACG TCAGGTAGCT TGAACATAAA CCAGTGCACA GAGGTTTGTA TCCGAGTATC 2460
TCTGAATTCA TATGTACAGA AGAAACAGCA AAACCCATAG GGAATGTGCA TTGGAGTACT 2520
TGGTTTTGTT CTGCCAAATG CTAGATTGCT CTCAGGGGAT GTGCATTGTT ACCGCTCACT 2580
TTTGTTCTCC CATAATCTCA TAGGTTGCAT ATGGTTATAG CCTGTGATAT CTATCTATTG 2640
TCTTATGAAG AAATCAACAG CTGTGTTACT TCCATAGTCT TGTAGTAAAA GATATCAATA 2700
GGTCTATCTA TTGTAATTGT AATTTTATAG GAGGAATGAG CACTTATAGT CTACTGCAAT 2760
TATATCATTT TTTTTGATAG ATATTCAAGG TAACAATCCT ATGTAGCCTT CATATGATTA 2820
TATAAAG 2828
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0026 Solyc02g078790.2.1 Solanum lycopersicum 93 0.0 1337
WERAM-Viv-0089 VIT_14s0060g02420.t01 Vitis vinifera 66 0.0 977
WERAM-Prp-0108 EMJ09853 Prunus persica 65 0.0 954
WERAM-Thc-0068 EOY11467 Theobroma cacao 65 0.0 943
WERAM-Glm-0262 GLYMA20G37910.2 Glycine max 64 0.0 936
WERAM-Met-0026 AES61379 Medicago truncatula 63 0.0 914
WERAM-Amt-0068 ERN16983 Amborella trichopoda 51 0.0 747
WERAM-Brd-0031 BRADI1G62640.1 Brachypodium distachyon 47 0.0 681
WERAM-Ors-0031 OS03T0346700-01 Oryza sativa 47 0.0 679
WERAM-Org-0036 ORGLA03G0163900.1 Oryza glaberrima 47 0.0 676
WERAM-Aet-0090 EMT30788 Aegilops tauschii 46 0.0 662
WERAM-Tra-0155 Traes_4DL_7CD41060B.1 Triticum aestivum 46 0.0 660
WERAM-Sei-0127 Si034162m Setaria italica 46 0.0 654
WERAM-Orm-0039 OMERI03G15300.1 Oryza meridionalis 46 0.0 647
WERAM-Sob-0008 Sb01g035540.1 Sorghum bicolor 45 0.0 642
WERAM-Ori-0042 BGIOSGA012608-PA Oryza indica 45 0.0 636
WERAM-Orr-0036 ORUFI03G17780.1 Oryza rufipogon 45 3e-180 629
WERAM-Orgl-0038 OGLUM03G17600.1 Oryza glumaepatula 45 3e-178 622
WERAM-Orni-0034 ONIVA03G18210.1 Oryza nivara 45 2e-177 620
WERAM-Orp-0035 OPUNC03G16540.1 Oryza punctata 45 3e-177 619
WERAM-Orb-0036 OBART03G17150.1 Oryza barthii 44 2e-173 607
WERAM-Orbr-0043 OB03G26770.1 Oryza brachyantha 46 9e-159 558
WERAM-Lep-0039 LPERR03G14970.1 Leersia perrieri 45 2e-156 550
WERAM-Pot-0147 POPTR_0015s01510.1 Populus trichocarpa 40 5e-143 505
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 37 3e-135 479
WERAM-Arl-0098 fgenesh2_kg.6__ 3604__ AT4G00990.1 Arabidopsis lyrata 38 1e-133 474
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 36 9e-125 445
WERAM-Bro-0002 Bo00957s030.1 Brassica oleracea 36 2e-120 431
WERAM-Brr-0086 Bra016801.1-P Brassica rapa 36 8e-120 428
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 34 1e-117 421
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 34 4e-110 396
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 42 8e-97 352
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 36 2e-95 347
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 33 9e-79 292
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 26 3e-35 147
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 26 1e-34 145
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 26 2e-34 145
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 26 4e-33 140
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 36 7e-20 96.7
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 36 7e-20 96.7
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 35 2e-19 95.5
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 35 2e-19 95.5
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 35 2e-19 95.1
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 35 2e-19 95.1
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 35 2e-19 95.1
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 35 2e-19 95.1
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 35 2e-19 95.1
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 35 2e-19 95.1
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 35 2e-19 95.1
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 35 2e-19 95.1
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 35 2e-19 95.1
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 35 2e-19 95.1
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 35 2e-19 95.1
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 35 2e-19 95.1
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 35 2e-19 95.1
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 35 2e-19 95.1
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 35 2e-19 95.1
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 35 2e-19 95.1
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 35 3e-19 94.7
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 35 3e-19 94.7
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 35 3e-19 94.7
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 35 3e-19 94.7
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 35 3e-19 94.7
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 35 3e-19 94.7
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 35 3e-19 94.7
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 35 3e-19 94.7
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 35 3e-19 94.7
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 35 3e-19 94.7
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 35 3e-19 94.7
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 35 3e-19 94.7
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 35 3e-19 94.7
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 35 3e-19 94.7
WERAM-Soa-0091 ENSSARP00000008521.1 Sorex araneus 35 4e-19 94.4
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 34 5e-19 94.0
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 34 5e-19 94.0
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 34 5e-19 94.0
Created Date 25-Jun-2016