Tag |
Content |
WERAM ID |
WERAM-Ict-0202 |
Ensembl Protein ID |
ENSSTOP00000021402.1 |
Gene Name |
KDM4A |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
Me_Reader |
TTD |
2.80e-44 |
150.7 |
321 |
436 |
Me_Reader |
PHD |
1.80e-10 |
40.9 |
153 |
289 |
|
Organism |
Ictidomys tridecemlineatus |
Domain Profile |
Me_Reader TTD
TTD.txt 3 asievGakvaakdrdeewyqaevvkvsaettkyevdfeegkeredlskeyivpleklklrpegdpeaefqkgekVlarypdttfYpAkv 91 +si++G+kv++k++++++yq+evv++++et+ yev+f++g+++++l++e+iv++++l+l+p++ +ge+V++r++d+++Y+Ak+ ENSSTOP00000021402.1 321 QSITAGQKVISKHKNGRFYQCEVVRLTTETF-YEVNFDDGSFSDNLYPEDIVSQDCLQLGPPA-------EGEVVQVRWTDGQVYGAKF 401 689****************************.*******************************.......******************* PP TTD.txt 92 iaskkdgtysvkFeDgssevvkraqvyalskeenk 126 +as++ ++y+v+FeDgs+ vvkr++vy+l++e++k ENSSTOP00000021402.1 402 VASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPK 436 *********************************95 PP
Me_Reader PHD
PHD.txt 11 degekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 ++g++++v C++C+ +H++C+++p +++++++w+C +C ENSSTOP00000021402.1 153 EDGTSILVSCKKCSVRVHASCYGVP--PAKASEEWMCSRCS 191 4566679******************..6666657******7 PP PHD.txt 4 ClvCgkddegekemvqCdeCddwfHlkCv 32 Cl C g ++q + d+w+H++C ENSSTOP00000021402.1 200 CL-C-SLRGG---ALQRANDDRWVHVSCA 223 44.6.33333...456666689******7 PP PHD.txt 4 ClvC.gkddegekemvqCde..CddwfHlkCvklpl 36 C++C ++++ ++ ++vqC++ C+++fH++C + + ENSSTOP00000021402.1 254 CVFCkKRRKRNAGCCVQCSHgrCPTAFHVSCAQAAG 289 ****5467777889*****************99874 PP
|
Protein Sequence (Fasta) | AQVADEYMFS LEENKKSKGR RQPLSKLPRH HPLVLQDCVS DDETSEQLSP EEEAEETEAW 60 AKPLSQLWQN RPPNFEAEKE FNETMAQQAP HCAVCMIFQT YHQVEFGGLS QNCGNTSELA 120 PQKQRTKPLI PEMCFTSTGC STDINLSTPY LEEDGTSILV SCKKCSVRVH ASCYGVPPAK 180 ASEEWMCSRC SANALEEDCC LCSLRGGALQ RANDDRWVHV SCAVAILEAR FVNIAERSPV 240 DVSKIPLPRF KLKCVFCKKR RKRNAGCCVQ CSHGRCPTAF HVSCAQAAGV MMQPDDWPFV 300 VFITCFRHKI PNLERAKGAL QSITAGQKVI SKHKNGRFYQ CEVVRLTTET FYEVNFDDGS 360 FSDNLYPEDI VSQDCLQLGP PAEGEVVQVR WTDGQVYGAK FVASHPIQMY QVEFEDGSQL 420 VVKRDDVYTL DEELPKRVKS RLSVASDMRF NEIFTEKEVK QEKKRQRVIN SRYREDYIEP 480 ALYRAIME 488Protein Fasta Sequence
>ENSSTOP00000021402.1|PHD|Ictidomys tridecemlineatus AQVADEYMFSLEENKKSKGRRQPLSKLPRHHPLVLQDCVSDDETSEQLSPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEFNETMAQQAPHCAVCMIFQTYHQVEFGGLSQNCGNTSELAPQKQRTKPLIPEMCFTSTGCSTDINLSTPYLEEDGTSILVSCKKCSVRVHASCYGVPPAKASEEWMCSRCSANALEEDCCLCSLRGGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKKRRKRNAGCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALQSITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLGPPAEGEVVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRLSVASDMRFNEIFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME
|
Nucleotide Sequence (Fasta) | GCTCAGGTTG CAGATGAATA CATGTTTTCC CTGGAAGAGA ATAAGAAGTC AAAGGGTCGC 60 CGACAGCCCT TAAGCAAGCT TCCACGCCAT CACCCACTGG TGTTACAGGA TTGTGTCAGT 120 GATGATGAGA CCTCTGAACA GCTGTCCCCT GAGGAGGAGG CTGAGGAGAC AGAGGCCTGG 180 GCCAAGCCCC TAAGCCAGCT GTGGCAGAAC CGACCTCCGA ACTTTGAGGC TGAAAAAGAA 240 TTCAATGAGA CCATGGCCCA GCAGGCCCCT CACTGTGCTG TCTGTATGAT CTTTCAAACG 300 TACCATCAGG TCGAGTTTGG AGGTCTTAGT CAGAACTGTG GAAACACTTC AGAATTAGCC 360 CCCCAGAAGC AGAGGACCAA GCCATTGATT CCAGAAATGT GCTTCACTTC AACTGGCTGC 420 AGCACAGACA TCAACCTTTC TACTCCTTAC CTTGAGGAGG ATGGCACCAG CATTCTAGTT 480 TCCTGCAAGA AGTGCAGTGT CCGGGTCCAT GCCAGTTGCT ATGGGGTTCC CCCAGCCAAA 540 GCTTCTGAAG AGTGGATGTG TTCTCGGTGT TCAGCCAATG CCCTGGAGGA AGACTGCTGT 600 TTATGCTCCT TACGAGGAGG GGCCCTGCAG AGAGCAAATG ATGACAGATG GGTTCATGTT 660 TCATGTGCTG TGGCGATCCT GGAAGCAAGA TTTGTCAATA TTGCAGAAAG AAGTCCTGTG 720 GATGTGAGCA AAATCCCCCT GCCCCGCTTC AAACTGAAAT GTGTCTTCTG TAAGAAGCGG 780 AGGAAAAGAA ATGCTGGCTG CTGTGTGCAG TGTTCTCACG GCCGTTGCCC AACTGCATTC 840 CATGTAAGCT GTGCCCAGGC TGCTGGAGTG ATGATGCAGC CGGATGACTG GCCCTTTGTT 900 GTCTTCATTA CCTGCTTTCG GCACAAGATT CCCAACTTGG AGCGTGCCAA GGGTGCCTTG 960 CAGAGCATCA CTGCAGGCCA GAAGGTCATT AGCAAGCACA AGAATGGGCG ATTCTACCAG 1020 TGTGAGGTGG TCAGACTCAC CACTGAGACC TTCTATGAAG TCAACTTTGA TGATGGCTCC 1080 TTCAGTGACA ATCTGTATCC TGAGGACATA GTGAGCCAGG ACTGCCTACA GTTGGGTCCT 1140 CCTGCTGAAG GAGAAGTGGT TCAAGTGAGA TGGACGGATG GCCAAGTCTA TGGAGCTAAA 1200 TTTGTGGCCT CCCACCCCAT CCAGATGTAC CAGGTGGAGT TTGAGGATGG CTCGCAGCTT 1260 GTGGTTAAGA GAGATGATGT ATACACGCTG GATGAAGAGC TTCCCAAGAG AGTCAAGTCT 1320 AGATTGTCAG TAGCCTCAGA CATGCGCTTC AACGAGATTT TCACGGAGAA AGAGGTTAAG 1380 CAGGAAAAGA AACGGCAGCG GGTAATCAAC TCGAGGTACC GAGAAGACTA CATCGAGCCT 1440 GCACTGTACC GGGCCATCAT GGAGTAG
1468Nucleotide Fasta Sequence
>ENSSTOP00000021402.1|PHD|Ictidomys tridecemlineatus GCTCAGGTTGCAGATGAATACATGTTTTCCCTGGAAGAGAATAAGAAGTCAAAGGGTCGCCGACAGCCCTTAAGCAAGCTTCCACGCCATCACCCACTGGTGTTACAGGATTGTGTCAGTGATGATGAGACCTCTGAACAGCTGTCCCCTGAGGAGGAGGCTGAGGAGACAGAGGCCTGGGCCAAGCCCCTAAGCCAGCTGTGGCAGAACCGACCTCCGAACTTTGAGGCTGAAAAAGAATTCAATGAGACCATGGCCCAGCAGGCCCCTCACTGTGCTGTCTGTATGATCTTTCAAACGTACCATCAGGTCGAGTTTGGAGGTCTTAGTCAGAACTGTGGAAACACTTCAGAATTAGCCCCCCAGAAGCAGAGGACCAAGCCATTGATTCCAGAAATGTGCTTCACTTCAACTGGCTGCAGCACAGACATCAACCTTTCTACTCCTTACCTTGAGGAGGATGGCACCAGCATTCTAGTTTCCTGCAAGAAGTGCAGTGTCCGGGTCCATGCCAGTTGCTATGGGGTTCCCCCAGCCAAAGCTTCTGAAGAGTGGATGTGTTCTCGGTGTTCAGCCAATGCCCTGGAGGAAGACTGCTGTTTATGCTCCTTACGAGGAGGGGCCCTGCAGAGAGCAAATGATGACAGATGGGTTCATGTTTCATGTGCTGTGGCGATCCTGGAAGCAAGATTTGTCAATATTGCAGAAAGAAGTCCTGTGGATGTGAGCAAAATCCCCCTGCCCCGCTTCAAACTGAAATGTGTCTTCTGTAAGAAGCGGAGGAAAAGAAATGCTGGCTGCTGTGTGCAGTGTTCTCACGGCCGTTGCCCAACTGCATTCCATGTAAGCTGTGCCCAGGCTGCTGGAGTGATGATGCAGCCGGATGACTGGCCCTTTGTTGTCTTCATTACCTGCTTTCGGCACAAGATTCCCAACTTGGAGCGTGCCAAGGGTGCCTTGCAGAGCATCACTGCAGGCCAGAAGGTCATTAGCAAGCACAAGAATGGGCGATTCTACCAGTGTGAGGTGGTCAGACTCACCACTGAGACCTTCTATGAAGTCAACTTTGATGATGGCTCCTTCAGTGACAATCTGTATCCTGAGGACATAGTGAGCCAGGACTGCCTACAGTTGGGTCCTCCTGCTGAAGGAGAAGTGGTTCAAGTGAGATGGACGGATGGCCAAGTCTATGGAGCTAAATTTGTGGCCTCCCACCCCATCCAGATGTACCAGGTGGAGTTTGAGGATGGCTCGCAGCTTGTGGTTAAGAGAGATGATGTATACACGCTGGATGAAGAGCTTCCCAAGAGAGTCAAGTCTAGATTGTCAGTAGCCTCAGACATGCGCTTCAACGAGATTTTCACGGAGAAAGAGGTTAAGCAGGAAAAGAAACGGCAGCGGGTAATCAACTCGAGGTACCGAGAAGACTACATCGAGCCTGCACTGTACCGGGCCATCATGGAGTAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |