Tag |
Content |
WERAM ID |
WERAM-Cap-0117 |
Ensembl Protein ID |
ENSCPOP00000009301.2 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDM |
JHDM3_JMJD2 |
1.90e-90 |
301.2 |
39 |
204 |
Me_Reader |
TTD |
8.40e-44 |
149.1 |
792 |
907 |
Me_Reader |
PHD |
9.80e-09 |
35.3 |
624 |
760 |
|
Organism |
Cavia porcellus |
Domain Profile |
HDM JHDM3_JMJD2
JHDM3.txt 2 edveeWnlnklktildsvekelkieieGvntpylyvgmlkttfaWhvedmdlysinylhfGapktWyavpseaakrlekllrkefsesa 90 ++v+eWn+++lktild veke++i+ieGvntpyly+gm+kt+faWh+edmdlysinylhfG+pk+Wy+vp+e++krle+l++ +f++sa ENSCPOP00000009301.2 39 KHVDEWNIGRLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSA 127 6899************************************************************************************* PP JHDM3.txt 91 keceaflrhkttlisPellkkagipfnrivqeagefvitfPygyhaGfnhGfnlaestnfaterwievgkeaakcsc 167 ++ceaflrhk+tlisP +lkk+gipf++++qeagef+itfPygyhaGfnhGfn+aestnfat+rwie+gk+a++csc ENSCPOP00000009301.2 128 QSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSC 204 ****************************************************************************9 PP
Me_Reader TTD
TTD.txt 3 asievGakvaakdrdeewyqaevvkvsaettkyevdfeegkeredlskeyivpleklklrpegdpeaefqkgekVlarypdttfYpAkv 91 +si++G+kv++k++++++yq+evv++++et+ yev+f++g+++++l++e+iv++++l+l+p++ +ge+V++r++d+++Y+Ak+ ENSCPOP00000009301.2 792 QSITAGQKVISKHKNGRFYQCEVVRLTTETF-YEVNFDDGSFSDNLYPEDIVSQDCLQLGPPA-------EGEVVQVRWTDGQVYGAKF 872 689****************************.*******************************.......******************* PP TTD.txt 92 iaskkdgtysvkFeDgssevvkraqvyalskeenk 126 +as++ ++y+v+FeDgs+ vvkr++vy+l++e++k ENSCPOP00000009301.2 873 VASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPK 907 *********************************95 PP
Me_Reader PHD
PHD.txt 11 degekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 ++g++++v C++C+ +H++C+++p +++++++w+C +C ENSCPOP00000009301.2 624 EDGTSMLVSCKKCSVRVHASCYGVP--PAKASEDWMCSRCS 662 45556699*****************..6665556******7 PP PHD.txt 4 ClvCgkddegekemvqCdeCddwfHlkCv 32 Cl C g ++q + d+w+H++C ENSCPOP00000009301.2 671 CL-C-SLRGG---ALQRANDDRWVHVSCA 694 44.6.33333...456666689******7 PP PHD.txt 4 ClvC.gkddegekemvqCde..CddwfHlkCvklpl 36 C++C ++++ ++ ++vqC++ C+++fH++C + + ENSCPOP00000009301.2 725 CVFCkKRRKRNAGCCVQCSHgrCPTAFHVSCAQAAG 760 ****5467777889*****************99874 PP
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Protein Sequence (Fasta) | RYCTPRYSEF EELERKYWKN LTFNPPIYGA DVNGTLYEKH VDEWNIGRLK TILDLVEKES 60 GITIEGVNTP YLYFGMWKTS FAWHTEDMDL YSINYLHFGE PKSWYSVPPE HGKRLERLAK 120 GFFPGSAQSC EAFLRHKMTL ISPLMLKKYG IPFDKVTQEA GEFMITFPYG YHAGFNHGFN 180 CAESTNFATR RWIEYGKQAV LCSCRKDMVK ISMDVFVRKF QPERYKLWKA GKDSAVIDHT 240 LPTPEAAEFL KECELPPRAG SEEECPEEDM EGVEDGEEGD LKRGLAKHRI GTKRHRVCLE 300 IPQEVSQSDL FLKEELSSGQ YEMTECQATL APVRPTHNSV RQVEDGLPFP DYSDSAEVKF 360 EELKNVKLEE EDEEEEQEAA ALDLSVNPAS ITGRLVFSGS KKKSSSSLGS SSRDSVSSDS 420 ETSEPLSCQA EGQTGVLTVH SYARGDGRVT VAQPCTRKKG SAPRSISERE LAEVADEYMF 480 SLEENKKSKG RRQPLSKLPR HHPLVLQECI SDDETSEQLT PEEEAEETEA WAKPLSQLWQ 540 NRPPNFEAEK EFNESLAQQP PHCAVCMIFQ TYHQVEFGGL SQNCGNASEL ASQKQRTKPL 600 IPEMCFTSTG CSTDINLSTP YLEEDGTSML VSCKKCSVRV HASCYGVPPA KASEDWMCSR 660 CSANALEEDC CLCSLRGGAL QRANDDRWVH VSCAVAILEA RFVNIAERSP VDVSKIPLPR 720 FKLKCVFCKK RRKRNAGCCV QCSHGRCPTA FHVSCAQAAG VMMQPDDWPF VVFITCFRHR 780 IPSLERAKGA LQSITAGQKV ISKHKNGRFY QCEVVRLTTE TFYEVNFDDG SFSDNLYPED 840 IVSQDCLQLG PPAEGEVVQV RWTDGQVYGA KFVASHPIQM YQVEFEDGSQ LVVKRDDVYT 900 LDEELPKRVK SRLSVASDMR FNEIFTEKEV KQEKKRQRVI NSRYREDYIE PALYRAIME 959Protein Fasta Sequence
>ENSCPOP00000009301.2|PHD|Cavia porcellus RYCTPRYSEFEELERKYWKNLTFNPPIYGADVNGTLYEKHVDEWNIGRLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDSAVIDHTLPTPEAAEFLKECELPPRAGSEEECPEEDMEGVEDGEEGDLKRGLAKHRIGTKRHRVCLEIPQEVSQSDLFLKEELSSGQYEMTECQATLAPVRPTHNSVRQVEDGLPFPDYSDSAEVKFEELKNVKLEEEDEEEEQEAAALDLSVNPASITGRLVFSGSKKKSSSSLGSSSRDSVSSDSETSEPLSCQAEGQTGVLTVHSYARGDGRVTVAQPCTRKKGSAPRSISERELAEVADEYMFSLEENKKSKGRRQPLSKLPRHHPLVLQECISDDETSEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEFNESLAQQPPHCAVCMIFQTYHQVEFGGLSQNCGNASELASQKQRTKPLIPEMCFTSTGCSTDINLSTPYLEEDGTSMLVSCKKCSVRVHASCYGVPPAKASEDWMCSRCSANALEEDCCLCSLRGGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKKRRKRNAGCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHRIPSLERAKGALQSITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLGPPAEGEVVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRLSVASDMRFNEIFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME
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Nucleotide Sequence (Fasta) | AGGTATTGTA CCCCACGCTA CAGTGAGTTT GAAGAGCTTG AGCGGAAATA CTGGAAGAAC 60 CTCACATTCA ATCCTCCCAT CTATGGTGCA GATGTGAATG GTACTCTCTA TGAAAAGCAC 120 GTCGATGAGT GGAATATTGG CCGGCTGAAG ACCATCTTGG ACTTGGTGGA GAAGGAGAGT 180 GGGATCACCA TTGAGGGAGT GAACACCCCA TACTTGTATT TTGGCATGTG GAAGACGTCC 240 TTTGCCTGGC ATACGGAAGA CATGGACCTG TACAGCATCA ACTACTTGCA CTTCGGAGAG 300 CCAAAGTCCT GGTACTCTGT TCCACCCGAG CATGGAAAAC GCCTGGAGCG CCTTGCCAAA 360 GGCTTTTTCC CAGGAAGTGC TCAAAGCTGT GAGGCTTTTC TTCGCCATAA GATGACCCTG 420 ATATCCCCTT TAATGCTGAA GAAATACGGC ATTCCTTTTG ACAAGGTGAC TCAAGAAGCT 480 GGCGAGTTTA TGATCACTTT CCCTTATGGC TACCATGCTG GTTTTAACCA TGGCTTTAAC 540 TGTGCGGAAT CTACCAACTT TGCTACACGT CGATGGATTG AATATGGCAA ACAAGCTGTA 600 TTGTGCTCCT GCAGAAAGGA TATGGTGAAG ATCTCCATGG ATGTGTTTGT GAGGAAGTTC 660 CAGCCAGAAA GGTACAAACT TTGGAAAGCT GGCAAGGACA GCGCGGTCAT CGACCACACT 720 CTGCCTACTC CAGAAGCCGC TGAGTTTCTC AAAGAGTGTG AACTACCACC AAGAGCCGGG 780 AGTGAAGAGG AGTGCCCTGA AGAGGACATG GAAGGGGTGG AGGACGGAGA GGAGGGAGAC 840 CTGAAGAGAG GCCTGGCCAA GCATCGTATA GGAACAAAGA GGCACCGGGT TTGTCTGGAA 900 ATACCACAGG AGGTGAGTCA GAGTGACCTG TTCCTCAAGG AGGAGCTGAG CTCTGGCCAG 960 TATGAGATGA CGGAGTGCCA GGCCACACTT GCTCCCGTGA GGCCCACCCA CAACTCTGTG 1020 CGGCAAGTTG AGGATGGTCT ACCCTTCCCA GATTACTCTG ACTCTGCTGA AGTCAAATTC 1080 GAAGAGCTCA AGAACGTCAA ACTAGAAGAG GAAGATGAAG AGGAAGAACA AGAGGCAGCT 1140 GCCCTCGATC TTTCTGTAAA TCCTGCTTCT ATAACTGGAC GCCTGGTCTT CTCGGGTTCC 1200 AAAAAGAAAT CATCTTCTAG CCTGGGCTCC AGTTCTCGGG ATTCTGTTTC TTCTGATTCG 1260 GAAACCAGTG AGCCCCTCTC CTGCCAAGCT GAAGGGCAAA CGGGAGTTCT TACTGTGCAC 1320 AGCTATGCCA GAGGCGATGG CAGGGTCACC GTGGCACAGC CGTGCACAAG GAAGAAAGGC 1380 AGTGCCCCCA GAAGTATCAG CGAGCGGGAG CTGGCTGAGG TTGCAGATGA ATACATGTTT 1440 TCCCTGGAGG AGAATAAGAA GTCCAAGGGT CGCCGTCAGC CCTTAAGCAA GCTCCCGAGG 1500 CATCATCCGC TTGTGTTGCA GGAGTGCATC AGTGACGATG AGACCTCTGA GCAATTGACC 1560 CCCGAGGAGG AGGCTGAGGA GACAGAGGCC TGGGCCAAGC CCCTGAGCCA ACTGTGGCAG 1620 AACCGACCCC CAAACTTTGA GGCTGAAAAG GAATTCAATG AGAGCTTGGC CCAGCAGCCC 1680 CCTCACTGTG CTGTCTGTAT GATCTTCCAG ACATATCATC AGGTCGAATT TGGAGGCCTT 1740 AGCCAGAACT GCGGAAATGC TTCGGAATTA GCCTCCCAAA AGCAGAGGAC TAAGCCATTG 1800 ATTCCAGAAA TGTGTTTCAC CTCAACTGGC TGCAGTACAG ACATTAACCT GTCTACTCCT 1860 TATCTTGAGG AAGATGGTAC CAGCATGCTA GTTTCCTGCA AGAAATGCAG TGTCCGTGTT 1920 CATGCTAGTT GCTACGGTGT ACCCCCTGCA AAGGCTTCTG AAGACTGGAT GTGTTCTCGG 1980 TGTTCAGCCA ATGCCCTAGA GGAAGACTGT TGTTTATGCT CCTTACGAGG AGGGGCCCTG 2040 CAGAGAGCAA ATGATGATAG GTGGGTCCAT GTTTCATGTG CTGTGGCAAT TCTGGAAGCA 2100 AGATTTGTCA ACATTGCAGA GAGAAGTCCA GTGGATGTGA GCAAAATCCC CTTGCCCCGC 2160 TTCAAACTGA AATGTGTCTT CTGTAAGAAG CGGAGGAAAA GAAACGCTGG CTGCTGTGTG 2220 CAGTGTTCCC ATGGTCGGTG CCCAACTGCC TTCCACGTGA GCTGTGCCCA GGCTGCTGGA 2280 GTGATGATGC AGCCAGATGA CTGGCCTTTT GTTGTCTTTA TTACCTGCTT TCGGCATAGG 2340 ATTCCCAGTT TGGAGCGTGC CAAAGGGGCC TTGCAGAGTA TTACTGCTGG CCAGAAGGTC 2400 ATTAGCAAAC ATAAGAATGG GCGCTTCTAC CAGTGTGAAG TGGTCAGGCT CACCACTGAG 2460 ACCTTCTATG AAGTCAATTT TGATGATGGC TCCTTCAGTG ACAATCTGTA TCCTGAGGAC 2520 ATAGTGAGCC AGGACTGTCT CCAGTTGGGT CCTCCTGCTG AAGGAGAAGT GGTCCAAGTG 2580 AGATGGACAG ATGGCCAAGT CTATGGAGCT AAATTTGTGG CTTCTCACCC CATCCAAATG 2640 TACCAGGTGG AGTTTGAGGA TGGCTCACAG CTTGTGGTTA AGAGAGATGA TGTGTATACA 2700 CTGGATGAAG AGCTTCCCAA AAGAGTCAAG TCTAGACTGT CAGTGGCCTC AGACATGCGC 2760 TTCAATGAGA TTTTCACGGA AAAAGAGGTG AAGCAAGAAA AGAAACGGCA GCGGGTCATC 2820 AACTCTAGAT ACCGGGAAGA TTATATAGAG CCTGCACTGT ACCGGGCCAT CATGGAGTAG 2880
2881Nucleotide Fasta Sequence
>ENSCPOP00000009301.2|PHD|Cavia porcellus AGGTATTGTACCCCACGCTACAGTGAGTTTGAAGAGCTTGAGCGGAAATACTGGAAGAACCTCACATTCAATCCTCCCATCTATGGTGCAGATGTGAATGGTACTCTCTATGAAAAGCACGTCGATGAGTGGAATATTGGCCGGCTGAAGACCATCTTGGACTTGGTGGAGAAGGAGAGTGGGATCACCATTGAGGGAGTGAACACCCCATACTTGTATTTTGGCATGTGGAAGACGTCCTTTGCCTGGCATACGGAAGACATGGACCTGTACAGCATCAACTACTTGCACTTCGGAGAGCCAAAGTCCTGGTACTCTGTTCCACCCGAGCATGGAAAACGCCTGGAGCGCCTTGCCAAAGGCTTTTTCCCAGGAAGTGCTCAAAGCTGTGAGGCTTTTCTTCGCCATAAGATGACCCTGATATCCCCTTTAATGCTGAAGAAATACGGCATTCCTTTTGACAAGGTGACTCAAGAAGCTGGCGAGTTTATGATCACTTTCCCTTATGGCTACCATGCTGGTTTTAACCATGGCTTTAACTGTGCGGAATCTACCAACTTTGCTACACGTCGATGGATTGAATATGGCAAACAAGCTGTATTGTGCTCCTGCAGAAAGGATATGGTGAAGATCTCCATGGATGTGTTTGTGAGGAAGTTCCAGCCAGAAAGGTACAAACTTTGGAAAGCTGGCAAGGACAGCGCGGTCATCGACCACACTCTGCCTACTCCAGAAGCCGCTGAGTTTCTCAAAGAGTGTGAACTACCACCAAGAGCCGGGAGTGAAGAGGAGTGCCCTGAAGAGGACATGGAAGGGGTGGAGGACGGAGAGGAGGGAGACCTGAAGAGAGGCCTGGCCAAGCATCGTATAGGAACAAAGAGGCACCGGGTTTGTCTGGAAATACCACAGGAGGTGAGTCAGAGTGACCTGTTCCTCAAGGAGGAGCTGAGCTCTGGCCAGTATGAGATGACGGAGTGCCAGGCCACACTTGCTCCCGTGAGGCCCACCCACAACTCTGTGCGGCAAGTTGAGGATGGTCTACCCTTCCCAGATTACTCTGACTCTGCTGAAGTCAAATTCGAAGAGCTCAAGAACGTCAAACTAGAAGAGGAAGATGAAGAGGAAGAACAAGAGGCAGCTGCCCTCGATCTTTCTGTAAATCCTGCTTCTATAACTGGACGCCTGGTCTTCTCGGGTTCCAAAAAGAAATCATCTTCTAGCCTGGGCTCCAGTTCTCGGGATTCTGTTTCTTCTGATTCGGAAACCAGTGAGCCCCTCTCCTGCCAAGCTGAAGGGCAAACGGGAGTTCTTACTGTGCACAGCTATGCCAGAGGCGATGGCAGGGTCACCGTGGCACAGCCGTGCACAAGGAAGAAAGGCAGTGCCCCCAGAAGTATCAGCGAGCGGGAGCTGGCTGAGGTTGCAGATGAATACATGTTTTCCCTGGAGGAGAATAAGAAGTCCAAGGGTCGCCGTCAGCCCTTAAGCAAGCTCCCGAGGCATCATCCGCTTGTGTTGCAGGAGTGCATCAGTGACGATGAGACCTCTGAGCAATTGACCCCCGAGGAGGAGGCTGAGGAGACAGAGGCCTGGGCCAAGCCCCTGAGCCAACTGTGGCAGAACCGACCCCCAAACTTTGAGGCTGAAAAGGAATTCAATGAGAGCTTGGCCCAGCAGCCCCCTCACTGTGCTGTCTGTATGATCTTCCAGACATATCATCAGGTCGAATTTGGAGGCCTTAGCCAGAACTGCGGAAATGCTTCGGAATTAGCCTCCCAAAAGCAGAGGACTAAGCCATTGATTCCAGAAATGTGTTTCACCTCAACTGGCTGCAGTACAGACATTAACCTGTCTACTCCTTATCTTGAGGAAGATGGTACCAGCATGCTAGTTTCCTGCAAGAAATGCAGTGTCCGTGTTCATGCTAGTTGCTACGGTGTACCCCCTGCAAAGGCTTCTGAAGACTGGATGTGTTCTCGGTGTTCAGCCAATGCCCTAGAGGAAGACTGTTGTTTATGCTCCTTACGAGGAGGGGCCCTGCAGAGAGCAAATGATGATAGGTGGGTCCATGTTTCATGTGCTGTGGCAATTCTGGAAGCAAGATTTGTCAACATTGCAGAGAGAAGTCCAGTGGATGTGAGCAAAATCCCCTTGCCCCGCTTCAAACTGAAATGTGTCTTCTGTAAGAAGCGGAGGAAAAGAAACGCTGGCTGCTGTGTGCAGTGTTCCCATGGTCGGTGCCCAACTGCCTTCCACGTGAGCTGTGCCCAGGCTGCTGGAGTGATGATGCAGCCAGATGACTGGCCTTTTGTTGTCTTTATTACCTGCTTTCGGCATAGGATTCCCAGTTTGGAGCGTGCCAAAGGGGCCTTGCAGAGTATTACTGCTGGCCAGAAGGTCATTAGCAAACATAAGAATGGGCGCTTCTACCAGTGTGAAGTGGTCAGGCTCACCACTGAGACCTTCTATGAAGTCAATTTTGATGATGGCTCCTTCAGTGACAATCTGTATCCTGAGGACATAGTGAGCCAGGACTGTCTCCAGTTGGGTCCTCCTGCTGAAGGAGAAGTGGTCCAAGTGAGATGGACAGATGGCCAAGTCTATGGAGCTAAATTTGTGGCTTCTCACCCCATCCAAATGTACCAGGTGGAGTTTGAGGATGGCTCACAGCTTGTGGTTAAGAGAGATGATGTGTATACACTGGATGAAGAGCTTCCCAAAAGAGTCAAGTCTAGACTGTCAGTGGCCTCAGACATGCGCTTCAATGAGATTTTCACGGAAAAAGAGGTGAAGCAAGAAAAGAAACGGCAGCGGGTCATCAACTCTAGATACCGGGAAGATTATATAGAGCCTGCACTGTACCGGGCCATCATGGAGTAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |