WERAM Information

Tag Content
WERAM ID WERAM-Sol-0028
Ensembl Protein ID Solyc02g079300.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc02g079300.2 Solyc02g079300.2.1 Solyc02g079300.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 5.50e-47 160.9 662 965
Organism Solanum lycopersicum
Domain Profile
  HDM JHDM2
           JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.vgilkkkwaeedlkellksieeeeldevtrk 91 
                         + g lNLa+klp  + + dlgP +y  yG  +e  +   + nl+++  d+vnil    + l +k +  ++k l+k+ + ++ +e+t +
  Solyc02g079300.2.1 662 KSGLLNLAVKLPPEMPQTDLGPSIYISYGGPEELSQAEFISNLCCESYDMVNILASaTDVLASKEQVRKIKCLMKNKKPQDHKEITSH 749
                         5799**************************************************9844666666777777777777777766666654 PP
           JHDM2.txt  96 pkekpgalWhifaakdaekirellekvskeqga...evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqn 183
                         + ++ ga W++f ++d++k+ e+l+++s e+       +++++pi dqs++ d+ +++rL+ee+ v++wt+ Q lg+a++ipag+p qv+ 
  Solyc02g079300.2.1 848 A-KTSGAQWDVFSREDVPKLLEYLKRHSSEFTSmrgYSKQVVHPILDQSFFFDAFHKMRLKEEFDVQPWTFEQHLGEAIIIPAGCPYQVKQ 937
                         3.458*************************98877767889************************************************** PP
           JHDM2.txt 184 lkscvkvaedFvsPEnvkecfrltkeyr 211
                         lksc++v  +F+sPEnv+ec+++t e r
  Solyc02g079300.2.1 938 LKSCINVVLHFISPENVAECINVTDEIR 965
                         ************************9976 PP
Protein Sequence
(Fasta)		MEENEAVPDD LRCNRTDGRQ WRCKRRVEEG KKLCEIHYVQ GRHRQMKQKV PESLKIVRNT 60
KSKNQRKIKN PKGSLEIGFS KSERALRILK KRKPLKHKPC VSEALDEALR RMELKRGDLP 120
LELIRVFLKR QLEKKNEKES KNASAEVMRE FPNALMAIPV IPAENFNNAG SVLDVKLGLD 180
SSSNPFSLRH FRSKNIEPLP ISTMQALPFA RNGKNSSKVK RRRLCHWCRR SSYRVLIKCS 240
SCKKQYFCLD CIKERRLEQQ EIKVKCPICR RDCSCRICKR SELKPNIHKE SLRHKRKVPK 300
VQLLNYLVHL LLPVLEKINE EQRIEVEIEA NISGKGESDI QIQQASAGDG KLYHCSNCNT 360
SILDYHRICS KCSYRLCLNC CRDSRHGSLT EDCKSEGSNE EQACSSNFER QSRMNHTSTS 420
RQSFSGIHYP SSRSCSNYQA CADGSISCPP AEYGGCSDSF LNLRCVFPYT WIKELEISAD 480
AILCSYNIQE TEHEFSSCSL CRGSDHKDAD VDSFINVAER RNSRDKFLYS PSINNLREEN 540
LEHFQKHWGE GHPIIVRNVL RNSSNLSWDP VVMFCTYLEK RSKCSLDKET AKAQNHSDWC 600
EVEIARKQIF MGSLEWQTHA TMQREIVKFK AWLSSHLFQE QFPGHHAEIL QAIPLQEYMN 660
PKSGLLNLAV KLPPEMPQTD LGPSIYISYG GPEELSQAEF ISNLCCESYD MVNILASATD 720
VLASKEQVRK IKCLMKNKKP QDHKEITSHS SDQKGKSSLH SGDTEESDLQ DATGEQLPDG 780
IAEVPFYSSD SQKGQRYEDR DGNISSDNEN DSESESDVSL FCSGSVERSE DSDSDHFFED 840
VDGAKKEAKT SGAQWDVFSR EDVPKLLEYL KRHSSEFTSM RGYSKQVVHP ILDQSFFFDA 900
FHKMRLKEEF DVQPWTFEQH LGEAIIIPAG CPYQVKQLKS CINVVLHFIS PENVAECINV 960
TDEIRLLPEH HKARGKVLEV KKMVICGMKN AIAEIRNLTH SKQSS 1005
Nucleotide Sequence
(Fasta)		CATCTATCAA TTTCTCATTA CACACACACT AGAGAGAAAA AAGTCACGCA CTAAACCCTA 60
GTCACAGAAA GTCCTCAACA CCCACAAATT TTTCTTTACT CTGTACTTCC AAGATTCGAT 120
TTTTCCGAGA AAGTTTTGAT TTTCTTGGAA AATCAAGACA CCCAATGGAG GAAAACGAGG 180
CTGTGCCGGA CGATCTCCGG TGTAACAGAA CTGACGGTCG ACAATGGCGG TGCAAGCGGC 240
GGGTAGAGGA AGGGAAGAAG CTTTGTGAAA TTCATTATGT TCAAGGTCGT CATAGGCAGA 300
TGAAGCAGAA GGTACCTGAA TCGCTGAAAA TCGTGAGAAA TACGAAAAGC AAGAATCAAC 360
GCAAGATTAA GAATCCAAAA GGGTCTCTTG AAATTGGGTT TTCAAAGAGT GAAAGGGCTT 420
TGAGAATTTT GAAGAAAAGG AAACCCCTCA AGCATAAACC CTGTGTTTCA GAGGCGTTAG 480
ATGAAGCTTT GAGGAGAATG GAGCTGAAAA GAGGCGATTT GCCTTTAGAA TTGATTCGTG 540
TTTTCTTGAA ACGGCAATTA GAGAAGAAAA ATGAGAAGGA ATCGAAAAAT GCTAGTGCTG 600
AGGTGATGAG AGAATTCCCT AATGCTTTAA TGGCTATTCC TGTTATACCT GCAGAGAATT 660
TTAACAATGC AGGTTCTGTT TTAGACGTAA AATTGGGCCT GGATTCCAGC TCTAACCCCT 720
TTTCGTTAAG GCATTTCAGA TCAAAAAATA TTGAACCCCT TCCAATTAGT ACAATGCAGG 780
CCTTGCCATT TGCTAGGAAT GGGAAGAATT CAAGTAAAGT AAAGAGAAGA AGGTTGTGTC 840
ATTGGTGTAG GAGAAGTAGC TACCGGGTCC TGATCAAGTG TTCGAGTTGT AAAAAACAGT 900
ACTTCTGTCT GGATTGTATT AAAGAAAGGC GTTTGGAACA GCAAGAAATT AAGGTGAAAT 960
GTCCCATTTG CCGTAGAGAT TGTAGTTGTA GGATCTGCAA AAGGAGTGAA TTGAAGCCCA 1020
ACATTCATAA GGAATCCTTG AGGCATAAAA GGAAGGTTCC AAAAGTCCAG CTACTTAATT 1080
ATCTGGTCCA CCTGCTTCTA CCGGTACTGG AAAAAATAAA TGAAGAGCAG AGAATTGAAG 1140
TAGAGATAGA AGCTAATATA TCAGGAAAGG GGGAATCTGA CATTCAGATT CAGCAGGCTT 1200
CAGCAGGAGA CGGAAAATTA TATCACTGTA GTAACTGCAA CACCTCCATC CTGGATTACC 1260
ACAGAATCTG CTCTAAGTGT TCATATAGGC TTTGCTTAAA TTGCTGTCGG GATTCCCGTC 1320
ATGGAAGCTT AACTGAAGAT TGTAAGTCCG AAGGTTCCAA TGAAGAACAA GCTTGTTCTT 1380
CTAACTTTGA GCGACAATCA AGGATGAATC ATACTAGCAC CTCAAGGCAA AGTTTCTCAG 1440
GGATACATTA TCCATCTTCC AGGTCATGCT CCAACTATCA AGCTTGTGCT GATGGCAGCA 1500
TATCTTGCCC CCCTGCAGAA TATGGTGGTT GTAGTGATAG CTTCCTCAAT TTAAGATGTG 1560
TATTTCCTTA CACTTGGATC AAGGAGCTGG AAATCAGCGC TGATGCAATA CTATGCAGCT 1620
ACAACATTCA GGAAACAGAA CACGAATTTT CATCATGCTC ACTATGCAGG GGAAGTGATC 1680
ATAAAGATGC TGATGTTGAT TCATTCATCA ACGTAGCCGA AAGACGAAAT TCGAGGGATA 1740
AGTTTCTGTA TAGTCCATCT ATAAATAATC TTCGTGAGGA AAACCTTGAA CACTTTCAGA 1800
AACACTGGGG TGAAGGTCAT CCTATTATAG TACGGAATGT GCTTCGGAAT TCTTCTAATT 1860
TGTCTTGGGA TCCAGTTGTT ATGTTCTGCA CTTACCTTGA GAAAAGGTCA AAATGTTCCT 1920
TGGATAAAGA AACAGCTAAG GCACAAAATC ACTCGGACTG GTGTGAGGTG GAAATAGCTA 1980
GAAAACAGAT ATTTATGGGG TCACTTGAAT GGCAAACACA TGCAACAATG CAGCGTGAAA 2040
TAGTAAAATT CAAAGCATGG CTTTCTTCCC ATCTATTCCA AGAGCAATTT CCTGGTCACC 2100
ATGCTGAGAT CTTGCAGGCT ATACCACTAC AAGAGTATAT GAATCCAAAA TCTGGTCTTC 2160
TAAATCTAGC AGTTAAATTG CCACCGGAAA TGCCACAAAC TGATTTAGGA CCTTCAATCT 2220
ATATTTCCTA TGGTGGGCCT GAAGAACTAT CACAAGCAGA ATTTATCTCT AACCTATGTT 2280
GTGAATCATA TGATATGGTT AATATTCTTG CAAGTGCTAC TGATGTTCTT GCTTCCAAGG 2340
AACAAGTAAG AAAAATAAAA TGTTTAATGA AAAATAAGAA GCCTCAAGAT CACAAGGAAA 2400
TTACCAGCCA TTCCAGTGAC CAGAAAGGAA AATCATCTCT GCATAGTGGA GACACAGAAG 2460
AATCCGATCT GCAGGATGCA ACTGGAGAGC AGTTGCCTGA TGGTATTGCT GAAGTACCTT 2520
TCTACTCTAG TGACTCACAA AAAGGTCAAA GGTATGAAGA CCGAGATGGC AATATCTCCA 2580
GTGACAATGA AAATGACTCT GAATCTGAGT CCGATGTCTC ACTGTTCTGC TCTGGATCTG 2640
TTGAAAGGTC TGAAGATTCA GACAGTGATC ATTTTTTTGA AGATGTTGAT GGTGCCAAGA 2700
AAGAAGCAAA AACCTCAGGT GCTCAATGGG ACGTTTTCAG CAGAGAAGAT GTCCCAAAGC 2760
TTCTAGAGTA CCTCAAAAGG CATTCTAGCG AGTTCACCTC AATGCGTGGT TATTCCAAAC 2820
AAGTTGTTCA CCCAATTCTT GATCAAAGTT TCTTCTTTGA TGCATTCCAC AAAATGAGGC 2880
TTAAGGAGGA ATTCGATGTT CAACCTTGGA CTTTTGAACA ACATCTTGGA GAAGCTATTA 2940
TCATCCCTGC TGGATGTCCA TATCAAGTCA AACAACTTAA GTCATGTATC AACGTTGTTT 3000
TGCACTTCAT CTCCCCTGAA AACGTCGCTG AATGTATAAA CGTAACTGAT GAAATTCGTC 3060
TACTTCCTGA GCACCACAAG GCCAGGGGAA AAGTGCTGGA GGTGAAGAAA ATGGTTATCT 3120
GTGGGATGAA GAATGCAATT GCAGAAATTC GCAACCTCAC GCATAGCAAA CAGTCCTCTT 3180
GAAAGATGAT AGACAAAACT GATTTGATGC AGATCTCGTA GACTTTGCAG GTTCGTGCTT 3240
ACATACTGCT AGGGAGTAGA ATCTAGTTCT TTTTTATGAC AAAGGAGGGA TGACTGGATA 3300
CTGATTGCTT AAGATCTTTG TCACTTGGCA AAGATTTACT TATGTGTATA TATGTTAGAA 3360
CCATTAAGGT GTAACTCATA GATCTACTCA GTGACAGATT TAACTCATAA AAAGGCAATG 3420
TAAACATATG CTACTATTTA ATACTGCAT
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0080 EOY28452 Theobroma cacao 49 0.0 879
WERAM-Prp-0024 EMJ14883 Prunus persica 44 0.0 771
WERAM-Glm-0088 GLYMA08G06460.1 Glycine max 42 0.0 732
WERAM-Pot-0124 POPTR_0011s04100.1 Populus trichocarpa 41 3e-149 526
WERAM-Viv-0002 VIT_00s0203g00110.t01 Vitis vinifera 54 4e-146 516
WERAM-Met-0108 AES90468 Medicago truncatula 44 3e-137 486
WERAM-Orbr-0045 OB03G31290.1 Oryza brachyantha 36 2e-122 437
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 35 2e-121 434
WERAM-Lep-0033 LPERR02G31600.1 Leersia perrieri 34 3e-121 433
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 34 1e-120 431
WERAM-Sei-0128 Si034182m Setaria italica 34 4e-120 430
WERAM-Arl-0098 fgenesh2_kg.6__ 3604__ AT4G00990.1 Arabidopsis lyrata 36 2e-119 428
WERAM-Orp-0036 OPUNC03G20970.1 Oryza punctata 35 2e-111 400
WERAM-Amt-0068 ERN16983 Amborella trichopoda 32 4e-102 370
WERAM-Sot-0039 PGSC0003DMT400035505 Solanum tuberosum 33 2e-101 368
WERAM-Orm-0040 OMERI03G20080.1 Oryza meridionalis 32 7e-92 336
WERAM-Brd-0031 BRADI1G62640.1 Brachypodium distachyon 28 1e-88 325
WERAM-Ors-0031 OS03T0346700-01 Oryza sativa 29 1e-87 322
WERAM-Org-0036 ORGLA03G0163900.1 Oryza glaberrima 29 7e-87 319
WERAM-Tra-0151 Traes_4BS_E367B8791.2 Triticum aestivum 29 2e-85 315
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 36 2e-81 301
WERAM-Ori-0043 BGIOSGA012927-PA Oryza indica 35 4e-81 300
WERAM-Aet-0028 EMT26740 Aegilops tauschii 33 8e-80 296
WERAM-Orr-0036 ORUFI03G17780.1 Oryza rufipogon 28 5e-79 293
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 34 5e-79 293
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 34 6e-79 293
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 33 6e-79 293
WERAM-Orb-0036 OBART03G17150.1 Oryza barthii 29 7e-79 293
WERAM-Orni-0034 ONIVA03G18210.1 Oryza nivara 28 8e-79 293
WERAM-Bro-0002 Bo00957s030.1 Brassica oleracea 34 7e-77 286
WERAM-Brr-0135 Bra027055.1-P Brassica rapa 34 9e-77 286
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 31 5e-76 283
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 34 5e-72 270
WERAM-Tru-0041 TRIUR3_19822-P1 Triticum urartu 32 1e-60 232
WERAM-Pes-0047 ENSPSIP00000007045.1 Pelodiscus sinensis 39 9e-24 110
WERAM-Orc-0105 ENSOCUP00000008900.3 Oryctolagus cuniculus 39 9e-24 110
WERAM-Ocp-0022 ENSOPRP00000001989.2 Ochotona princeps 39 1e-23 110
WERAM-Fec-0111 ENSFCAP00000009754.3 Felis catus 39 2e-23 108
WERAM-Vip-0004 ENSVPAP00000000405.1 Vicugna pacos 38 3e-23 108
WERAM-Caj-0207 ENSCJAP00000022938.2 Callithrix jacchus 38 3e-23 108
WERAM-Dan-0108 ENSDNOP00000012864.3 Dasypus novemcinctus 38 3e-23 108
WERAM-Cap-0195 ENSCPOP00000020827.1 Cavia porcellus 38 3e-23 108
WERAM-Mum-0192 ENSMUSP00000128789.1 Mus musculus 38 3e-23 108
WERAM-Paa-0087 ENSPANP00000002284.1 Papio anubis 38 3e-23 108
WERAM-Tas-0095 ENSTSYP00000010010.1 Tarsius syrichta 38 3e-23 108
WERAM-Ova-0218 ENSOARP00000022207.1 Ovis aries 38 4e-23 108
WERAM-Gog-0083 ENSGGOP00000006802.2 Gorilla gorilla 38 4e-23 108
WERAM-Otg-0117 ENSOGAP00000010248.2 Otolemur garnettii 38 4e-23 108
WERAM-Hos-0087 ENSP00000323659.5 Homo sapiens 38 4e-23 108
WERAM-Sus-0059 ENSSSCP00000008777.2 Sus scrofa 38 4e-23 108
WERAM-Poa-0107 ENSPPYP00000013616.2 Pongo abelii 38 4e-23 108
WERAM-Mup-0099 ENSMPUP00000009177.1 Mustela putorius furo 38 4e-23 108
WERAM-Bot-0126 ENSBTAP00000018069.5 Bos taurus 38 4e-23 108
WERAM-Caf-0086 ENSCAFP00000011182.3 Canis familiaris 38 4e-23 108
WERAM-Nol-0029 ENSNLEP00000003424.1 Nomascus leucogenys 38 4e-23 108
WERAM-Chs-0197 ENSCSAP00000012405.1 Chlorocebus sabaeus 38 4e-23 108
WERAM-Aim-0108 ENSAMEP00000010467.1 Ailuropoda melanoleuca 38 4e-23 108
WERAM-Pat-0097 ENSPTRP00000042227.4 Pan troglodytes 38 4e-23 107
WERAM-Fia-0125 ENSFALP00000010570.1 Ficedula albicollis 38 4e-23 107
WERAM-Gaga-0143 ENSGALP00000036346.1 Gallus gallus 38 4e-23 107
WERAM-Tut-0121 ENSTTRP00000009851.1 Tursiops truncatus 38 5e-23 107
WERAM-Meg-0127 ENSMGAP00000013877.2 Meleagris gallopavo 38 5e-23 107
WERAM-Prc-0027 ENSPCAP00000002242.1 Procavia capensis 38 5e-23 107
WERAM-Myl-0036 ENSMLUP00000003044.2 Myotis lucifugus 38 6e-23 107
WERAM-Ran-0048 ENSRNOP00000041218.4 Rattus norvegicus 38 7e-23 107
WERAM-Loa-0098 ENSLAFP00000008357.4 Loxodonta africana 38 7e-23 107
WERAM-Ora-0091 ENSOANP00000016437.2 Ornithorhynchus anatinus 39 8e-23 107
WERAM-Sah-0148 ENSSHAP00000015447.1 Sarcophilus harrisii 38 8e-23 107
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 38 1e-22 106
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 38 1e-22 106
WERAM-Tag-0136 ENSTGUP00000011165.1 Taeniopygia guttata 38 1e-22 106
WERAM-Xet-0113 ENSXETP00000038986.2 Xenopus tropicalis 38 1e-22 106
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 38 2e-22 105
Created Date 25-Jun-2016