WERAM Information

Tag Content
WERAM ID WERAM-Brr-0135
Ensembl Protein ID Bra027055.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra027055 Bra027055.1 Bra027055.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 1.20e-72 244.9 680 915
Organism Brassica rapa
Domain Profile
  HDM JHDM2
      JHDM2.txt   4 krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwaeedlkellksieee... 83 
                    +r+g lN+a klp+ +++pdlgPk+y AyG+  e +r++++t+lh+d+sdavnil++             v  lk+k++e+++ e + s +++   
  Bra027055.1-P 680 PRTGILNIAAKLPEGLIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHttevtlsqeqisaVKDLKQKHKEQNKLEEQGSGDKDiac 775
                    47899************************************************************9999876676666655543333333333555 PP
      JHDM2.txt  84 .......elde.vtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQkl 167
                           ++ e ++ ++ q+ +e+ +alW+if+++d++k++e+l+k++ke+++    +v ++++pihdqs+yl+ +++++L+ e+G+e+wt+vQkl
  Bra027055.1-P 776 greeegmDMPEiMSYEKQQNHDETGSALWDIFRREDVPKLEEYLRKHCKEFRHtfccPVTKVYHPIHDQSCYLTVEHKRKLKAEFGIEPWTFVQKL 871
                    5666666444424567888899999***************************999999999*********************************** PP
      JHDM2.txt 168 gdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                    g+av+ipag+pHqv+nlksc kva dFvsPEn++ec+rlt+e+r
  Bra027055.1-P 872 GEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTEEFR 915
                    ******************************************98 PP
Protein Sequence
(Fasta)		MESDDGVDFK AYSPIESSLF SFQCVWSTKK KRSLKLVKSK ELSRKEERER EGGMRPRPVI 60
FRVYSRKRNR LSRVDNVSAA GVEVILKEAP SHEKLQHSDH DDHDGMLLGD WIKQKRKESE 120
VTTVSVTKLE PLEDTILPSW SRRKNRRRVG VEVKSDMKST AVMKVEPCED HGRSTGRKRD 180
RRQVEHEEDV AWEEELQMIS KIQATKRRRR RRGSHSPGSR SRSPDSEVSD SLLKNGCSDD 240
PESMKTSSKE SKERIAICHQ CLKGERITLL VCSECEETMY CLQCIRKWYP HLSEDDIVDK 300
CPFCHKNCNC NRCLHLNGLI ETTKRDLANS ERRHHLQYLI ALMLPFLNML SQSQNQEIET 360
EANAQGLQPF EVDVTSAVSY CDERVYCDHC ATSIVDLHRS CPKCSFELCL NCCQEIREGS 420
MSQRPETKLQ YVNKGYKYMH GLEMEPSSSS VSEEDEEANT SAKWNAGSDG SIPCAPKELG 480
GCGDCMLELK RILPQDRISD LEQKAEAFLA SYDNSPRVSK CKCSALETDM TRKTASRNGS 540
TDNYLFCPRS LDVLKEEGLL HFQEHWKKGE PVIVGNALDN THGLSWEPMV MWRALCENLD 600
STASSKMSEV KAIDCLANCE VEINTRHFFE GYSKGRTYGN FWPEMLKLKD WPPSDKFEDL 660
LPRHCDEFIS ALPFQEYSDP RTGILNIAAK LPEGLIKPDL GPKTYIAYGI PDELGRGDSV 720
TKLHCDMSDA VNILTHTTEV TLSQEQISAV KDLKQKHKEQ NKLEEQGSGD KDIACGREEE 780
GMDMPEIMSY EKQQNHDETG SALWDIFRRE DVPKLEEYLR KHCKEFRHTF CCPVTKVYHP 840
IHDQSCYLTV EHKRKLKAEF GIEPWTFVQK LGEAVFIPAG CPHQVRNLKS CTKVAVDFVS 900
PENIHECLRL TEEFRQLPKN HKAREDKLEV SLFSLYILFL VYVFL 945
Nucleotide Sequence
(Fasta)		ATGGAGTCCG ATGATGGAGT TGATTTCAAG GCTTATAGTC CGATCGAGAG CTCTCTGTTT 60
TCCTTTCAAT GTGTTTGGTC CACGAAGAAG AAGAGAAGTT TGAAATTAGT CAAGTCCAAA 120
GAGCTTAGCA GGAAAGAGGA GAGAGAGAGA GAGGGAGGCA TGAGGCCGCG TCCTGTGATA 180
TTCAGAGTCT ATAGTAGGAA AAGGAATCGG CTTTCGCGTG TGGATAATGT CTCAGCAGCT 240
GGAGTTGAAG TTATTCTTAA AGAAGCACCA TCTCATGAGA AACTGCAACA CTCTGATCAT 300
GATGATCATG ATGGTATGTT ATTAGGTGAT TGGATTAAAC AAAAGAGGAA AGAATCCGAG 360
GTGACGACTG TGTCTGTAAC GAAACTGGAA CCTTTAGAAG ATACAATATT ACCTAGTTGG 420
AGTCGTAGGA AGAACAGACG CAGAGTAGGA GTTGAGGTTA AATCTGATAT GAAGTCAACG 480
GCTGTTATGA AAGTGGAACC TTGTGAAGAT CATGGAAGAT CCACTGGTAG AAAGAGAGAC 540
AGACGCCAAG TGGAACATGA AGAAGATGTG GCTTGGGAAG AAGAACTTCA AATGATTTCT 600
AAGATCCAGG CAACAAAGCG AAGAAGAAGA AGAAGAGGTT CCCACAGTCC AGGTTCACGT 660
TCACGTTCGC CAGATTCAGA GGTGTCAGAT TCCCTTCTGA AAAATGGGTG TTCTGATGAC 720
CCTGAAAGCA TGAAAACTTC TTCAAAGGAA TCTAAGGAAC GCATTGCCAT TTGCCATCAG 780
TGTTTGAAGG GGGAAAGGAT AACACTTCTC GTTTGCAGTG AATGTGAAGA GACAATGTAT 840
TGTCTTCAAT GTATAAGGAA ATGGTATCCA CATCTATCTG AGGATGATAT CGTTGATAAA 900
TGTCCTTTCT GCCACAAAAA TTGTAATTGC AACAGATGCT TGCATTTGAA TGGTTTAATC 960
GAGACAACGA AGAGGGACCT CGCGAATTCT GAAAGACGCC ATCATCTCCA ATACTTAATT 1020
GCTTTGATGC TTCCATTTTT GAATATGTTA TCCCAGTCCC AGAATCAAGA GATTGAAACT 1080
GAGGCAAACG CTCAAGGATT ACAGCCCTTT GAAGTTGACG TAACTAGCGC AGTGAGCTAC 1140
TGTGATGAAC GTGTATACTG TGATCATTGT GCAACTTCAA TTGTTGACTT GCACCGGAGC 1200
TGCCCAAAGT GCTCTTTCGA GCTTTGTTTG AACTGTTGTC AAGAGATTCG CGAAGGTTCT 1260
ATGTCCCAAC GCCCTGAAAC GAAGCTGCAG TATGTTAATA AAGGATACAA GTACATGCAT 1320
GGTTTAGAAA TGGAACCTAG CTCCTCTTCT GTTTCCGAGG AGGATGAAGA AGCTAACACA 1380
TCCGCAAAGT GGAATGCTGG TTCCGATGGA AGCATCCCTT GTGCACCAAA AGAGCTAGGT 1440
GGTTGTGGTG ATTGTATGTT GGAGCTTAAG CGAATCCTAC CACAGGACCG GATCTCAGAC 1500
TTGGAACAAA AGGCAGAGGC TTTCTTGGCA TCATACGATA ACAGCCCTCG AGTGTCGAAA 1560
TGTAAATGTT CTGCCTTGGA GACAGATATG ACAAGGAAAA CAGCTTCTAG GAATGGATCA 1620
ACCGACAACT ACTTGTTCTG TCCACGATCT CTTGATGTTT TGAAGGAAGA AGGGCTTCTG 1680
CATTTTCAAG AGCATTGGAA AAAGGGTGAA CCGGTAATCG TTGGGAACGC TCTTGATAAC 1740
ACACATGGTT TAAGCTGGGA GCCGATGGTT ATGTGGAGGG CGTTATGCGA AAATTTGGAT 1800
TCAACAGCAA GTTCTAAGAT GTCTGAAGTG AAAGCTATTG ATTGTTTAGC TAATTGTGAG 1860
GTGGAGATCA ATACTCGTCA TTTCTTTGAA GGTTATAGCA AAGGAAGAAC GTACGGAAAC 1920
TTCTGGCCTG AGATGTTAAA GCTAAAGGAC TGGCCTCCTT CTGATAAGTT CGAAGATCTT 1980
TTACCTCGTC ACTGTGACGA GTTCATATCC GCATTGCCTT TTCAAGAATA TAGCGATCCT 2040
AGAACCGGTA TTCTGAACAT TGCAGCAAAG CTTCCTGAAG GTCTTATCAA ACCAGATTTG 2100
GGTCCGAAAA CGTACATTGC CTACGGGATT CCAGATGAGC TTGGTAGAGG TGACTCCGTG 2160
ACTAAGCTTC ACTGCGATAT GTCAGACGCG GTTAATATTC TGACGCATAC AACTGAAGTA 2220
ACATTAAGTC AAGAACAGAT ATCTGCAGTC AAAGACCTGA AGCAGAAACA CAAGGAACAG 2280
AACAAGCTAG AGGAACAGGG CAGTGGAGAC AAAGACATTG CCTGCGGCCG TGAGGAAGAA 2340
GGAATGGACA TGCCAGAGAT TATGAGCTAT GAAAAACAGC AGAATCATGA CGAAACAGGA 2400
AGTGCTCTTT GGGACATTTT TAGGAGAGAA GATGTTCCAA AGTTAGAAGA GTATCTAAGA 2460
AAGCATTGCA AAGAATTTAG ACACACTTTT TGTTGTCCGG TTACAAAGGT TTATCACCCG 2520
ATACACGACC AATCATGCTA TTTAACCGTA GAGCATAAAA GAAAACTCAA GGCGGAGTTT 2580
GGGATCGAAC CATGGACATT TGTGCAAAAG CTAGGAGAAG CTGTGTTTAT TCCTGCGGGT 2640
TGCCCTCATC AAGTCCGGAA TCTAAAGTCG TGCACCAAAG TTGCAGTTGA CTTTGTGTCA 2700
CCAGAGAACA TCCATGAGTG TCTACGTCTC ACCGAAGAGT TTCGTCAACT TCCCAAGAAC 2760
CACAAGGCCA GAGAGGACAA ACTTGAGGTA AGTCTTTTCT CTCTTTATAT TCTTTTTCTT 2820
GTTTACGTGT TTTTGTGA 2839
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0174 Bo9g038630.1 Brassica oleracea 90 0.0 1608
WERAM-Arl-0004 Al_scaffold_0002_290 Arabidopsis lyrata 73 0.0 1171
WERAM-Art-0023 AT1G62310.1 Arabidopsis thaliana 71 0.0 1145
WERAM-Thc-0081 EOY28779 Theobroma cacao 62 0.0 890
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 60 0.0 859
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 60 0.0 858
WERAM-Prp-0037 EMJ15852 Prunus persica 60 0.0 858
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 61 0.0 840
WERAM-Glm-0083 GLYMA07G39310.2 Glycine max 59 0.0 840
WERAM-Met-0115 AES92666 Medicago truncatula 57 0.0 798
WERAM-Pot-0042 POPTR_0004s00770.1 Populus trichocarpa 58 0.0 778
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 48 0.0 689
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 48 0.0 659
WERAM-Sei-0128 Si034182m Setaria italica 47 0.0 650
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 46 3e-177 620
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 51 3e-176 616
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 46 7e-176 615
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 52 1e-174 611
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 52 1e-174 611
WERAM-Aet-0048 EMT13865 Aegilops tauschii 50 3e-172 603
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 51 4e-169 593
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 45 9e-166 582
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 46 1e-164 577
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 53 4e-161 566
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 44 1e-159 561
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 41 2e-159 560
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 44 8e-159 558
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 44 4e-158 556
WERAM-Amt-0068 ERN16983 Amborella trichopoda 38 5e-141 499
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 48 2e-138 491
WERAM-Brd-0109 BRADI4G29617.1 Brachypodium distachyon 57 1e-137 488
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 47 2e-137 488
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 59 2e-133 474
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 43 9e-128 455
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 38 8e-61 233
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 37 1e-60 232
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 37 8e-60 229
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 38 1e-59 229
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 37 2e-59 228
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 37 2e-59 228
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 38 2e-59 228
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 37 3e-59 228
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 38 5e-59 227
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 38 6e-59 226
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 37 6e-59 226
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 37 4e-58 224
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 36 4e-58 224
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 36 5e-58 224
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 36 5e-58 224
WERAM-Lac-0050 ENSLACP00000007100.1 Latimeria chalumnae 36 5e-58 223
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 38 5e-58 223
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 36 6e-58 223
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 36 7e-58 223
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 36 7e-58 223
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 36 7e-58 223
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 36 7e-58 223
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 36 7e-58 223
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 36 7e-58 223
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 36 8e-58 223
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 36 8e-58 223
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 36 8e-58 223
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 36 8e-58 223
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 36 8e-58 223
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 36 8e-58 223
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 36 8e-58 223
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 36 8e-58 223
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 36 8e-58 223
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 36 8e-58 223
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 36 8e-58 223
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 36 8e-58 223
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 36 9e-58 223
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 36 9e-58 223
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 36 9e-58 223
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 36 9e-58 223
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 36 9e-58 223
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 36 9e-58 223
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 36 1e-57 223
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 36 1e-57 222
WERAM-Ora-0091 ENSOANP00000016437.2 Ornithorhynchus anatinus 36 1e-57 222
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 36 2e-57 221
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 36 3e-57 221
Created Date 25-Jun-2016