WERAM Information

Tag Content
WERAM ID WERAM-Art-0023
Ensembl Protein ID AT1G62310.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G62310 AT1G62310.1 AT1G62310.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 2.90e-74 250.1 632 863
Organism Arabidopsis thaliana
Domain Profile
  HDM JHDM2
    JHDM2.txt   4 krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwaeedlkellksieee..... 83 
                  +r+g lN+a+klp+ f++pdlgPk+y AyG+  e +r++++t+lh+d+sdavnil++             v  lk+k++ +++ + +++ + +     
  AT1G62310.1 632 PRTGILNIATKLPEGFIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHtaevtlsqeqissVKALKQKHKLQNKVDKQSTEDCNekeee 729
                  47899***********************************************************9999997777766555553333332221122233 PP
    JHDM2.txt  84 eldevtrkrv..qdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipa 175
                  e +e+    +  ++ +e+ +alW+if+++d++k++e+l+k++ke+++    +v ++++pihdqs+yl+ +++++L+ eyG+e+wt+vQklg+av+ipa
  AT1G62310.1 730 EEEELNMPEIssNENEETGSALWDIFRREDVPKLEEYLRKHCKEFRHtycsPVTKVYHPIHDQSCYLTLEHKRKLKAEYGIEPWTFVQKLGEAVFIPA 827
                  44444444441155667789***************************999889999****************************************** PP
    JHDM2.txt 176 gapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                  g+pHqv+nlksc kva dFvsPEn++ec+rlt+e+r
  AT1G62310.1 828 GCPHQVRNLKSCTKVAVDFVSPENIHECLRLTEEFR 863
                  **********************************98 PP
Protein Sequence
(Fasta)		MDSGVKLEHM NCFQLSYQYS WTTRKKRTLK PFMSKGSSPS SSSDSRKRKL SRAEDSDDSA 60
VKRNAKRRRK ICKVEEYYED DDCILSDWVQ RNTAKRIDKR NEEVEVMVKI ESGDDCTIGK 120
WFSDVSSKRK DKRQVEVDED EEWEEEVTLC SKIKATSSRS RTHSLSANSP ENVTDVISPC 180
RSRSPASNVS DSIQKNDCTS SRKQSGPICH QCLKGERITL LICSECEKTM FCLQCIRKWY 240
PNLSEDDVVE KCPLCRQNCN CSKCLHLNGL IETSKRELAK SERRHHLQYL ITLMLPFLNK 300
LSIFQKLEIE FEATVQGKLP SEVEITAAIS YTDERVYCDH CATSIVDLHR SCPKCSYELC 360
LKCCQEIREG SLSERPEMKF HYVDRGHRYM HGLDAAEPSL SSTFEDEEAN PSDAKWSLGE 420
NGSITCAPEK LGGCGERMLE LRRILPLTWM SDLEHKAETF LSSYNISPRM LNCRCSSLET 480
ELTRKSASRT TSSDNYLFCP ESLGVLKEEE LLHFQEHWAK GEPVIVRNAL DNTPGLSWEP 540
MVMWRALCEN VNSTSSSEMS QVKAIDCLAN CEVEINTRQF FEGYSKGRTY ENFWPEMLKL 600
KDWPPSDKFE DLLPRHCDEF ISALPFQEYS DPRTGILNIA TKLPEGFIKP DLGPKTYIAY 660
GIPDELGRGD SVTKLHCDMS DAVNILTHTA EVTLSQEQIS SVKALKQKHK LQNKVDKQST 720
EDCNEKEEEE EEELNMPEIS SNENEETGSA LWDIFRREDV PKLEEYLRKH CKEFRHTYCS 780
PVTKVYHPIH DQSCYLTLEH KRKLKAEYGI EPWTFVQKLG EAVFIPAGCP HQVRNLKSCT 840
KVAVDFVSPE NIHECLRLTE EFRQLPKNHK AREDKLEASL LSL 883
Nucleotide Sequence
(Fasta)		TTTCTGTGTT TGTGTTCATC ATAAGGAGCT AAAGAATGGA TTCTGGAGTT AAATTGGAGC 60
ATATGAATTG TTTCCAATTA TCTTATCAAT ATTCGTGGAC GACTAGGAAG AAGAGAACTC 120
TGAAACCATT CATGTCAAAA GGTTCTAGCC CTAGTAGTAG TAGTGATAGT AGGAAACGGA 180
AGCTTTCGAG AGCTGAAGAT AGCGATGATT CAGCGGTTAA ACGGAATGCG AAACGAAGGA 240
GAAAGATATG CAAAGTAGAA GAATATTATG AAGATGATGA TTGCATATTA AGTGATTGGG 300
TTCAGAGGAA TACTGCGAAA AGGATTGATA AGCGCAACGA AGAAGTTGAA GTTATGGTTA 360
AGATAGAGTC AGGTGATGAT TGCACAATAG GTAAGTGGTT TTCTGATGTT AGTAGTAAAA 420
GGAAAGATAA ACGACAAGTA GAAGTTGATG AAGATGAGGA ATGGGAAGAA GAAGTTACAC 480
TGTGTTCTAA GATCAAGGCA ACGTCGTCGC GAAGCAGAAC CCATAGTTTA AGTGCTAACA 540
GTCCAGAAAA TGTTACAGAT GTTATTAGTC CTTGTCGTTC ACGGTCTCCA GCTTCTAATG 600
TATCAGATTC CATTCAGAAA AATGACTGCA CCAGTAGTAG AAAACAGAGT GGCCCAATTT 660
GTCATCAGTG CTTGAAAGGG GAAAGGATAA CACTTCTCAT TTGTAGTGAA TGTGAGAAGA 720
CAATGTTTTG TCTTCAATGT ATAAGGAAAT GGTATCCAAA TCTATCTGAG GATGATGTTG 780
TTGAGAAATG TCCTTTATGC CGTCAAAATT GTAATTGTAG CAAATGCTTG CATTTGAATG 840
GTTTAATTGA GACATCGAAG AGGGAACTCG CGAAATCTGA AAGACGTCAT CATCTCCAGT 900
ATTTGATTAC GTTGATGCTT CCTTTTCTGA ATAAGTTATC CATATTCCAG AAGCTAGAGA 960
TTGAATTTGA GGCAACTGTT CAAGGAAAAC TGCCTTCTGA AGTTGAAATA ACTGCGGCTA 1020
TAAGCTACAC TGATGAACGT GTATACTGTG ATCATTGTGC AACTTCAATT GTTGACTTGC 1080
ATCGAAGCTG TCCAAAGTGC TCTTATGAAC TTTGTTTGAA GTGCTGTCAA GAGATTCGTG 1140
AAGGATCGCT TTCTGAACGC CCTGAAATGA AGTTCCATTA TGTTGATAGA GGACATCGAT 1200
ATATGCATGG TTTAGATGCT GCGGAACCGA GCTTGTCTTC CACTTTTGAA GACGAAGAAG 1260
CTAACCCATC TGACGCTAAG TGGAGCCTTG GTGAAAATGG AAGCATCACT TGTGCACCAG 1320
AAAAGCTAGG TGGTTGTGGT GAACGGATGC TAGAGCTTAG GCGGATCCTA CCACTCACGT 1380
GGATGTCAGA TTTAGAGCAC AAAGCAGAGA CTTTCTTATC ATCATACAAT ATAAGCCCTA 1440
GAATGTTGAA CTGTAGGTGT TCTTCTTTGG AGACAGAGCT GACAAGGAAA TCAGCTTCGA 1500
GGACAACATC AAGTGACAAC TACCTTTTCT GTCCTGAATC TCTCGGTGTC TTGAAGGAAG 1560
AAGAGCTTCT TCATTTTCAA GAGCATTGGG CAAAAGGCGA ACCAGTAATC GTTAGGAACG 1620
CTCTTGACAA CACACCTGGT TTAAGCTGGG AGCCGATGGT TATGTGGCGG GCTTTATGCG 1680
AAAATGTGAA TTCAACATCA AGCTCTGAGA TGTCCCAAGT CAAAGCAATT GATTGCTTAG 1740
CTAATTGTGA GGTGGAGATC AATACTCGTC AGTTCTTTGA AGGTTATAGC AAAGGAAGAA 1800
CATATGAAAA TTTCTGGCCT GAGATGTTGA AGCTTAAGGA CTGGCCTCCT TCTGATAAGT 1860
TTGAAGATCT TCTACCTCGT CACTGTGATG AGTTCATATC CGCGTTACCT TTCCAGGAAT 1920
ATAGTGATCC TAGAACTGGA ATTCTTAACA TTGCAACAAA GCTTCCTGAA GGATTTATCA 1980
AACCAGATTT AGGTCCAAAA ACTTACATCG CCTATGGGAT TCCAGATGAG CTTGGTAGAG 2040
GCGATTCCGT GACTAAGCTT CACTGCGATA TGTCAGACGC GGTGAATATT CTAACGCATA 2100
CGGCCGAAGT GACCCTAAGT CAAGAACAAA TATCCTCAGT CAAAGCACTG AAACAGAAAC 2160
ACAAGTTACA GAATAAGGTC GATAAACAGA GTACTGAAGA CTGTAACGAA AAGGAAGAAG 2220
AAGAAGAAGA AGAATTGAAC ATGCCAGAGA TTTCGAGCAA TGAAAATGAA GAAACGGGCA 2280
GTGCTCTTTG GGACATATTT AGGAGAGAAG ACGTTCCCAA GTTAGAAGAG TATCTAAGAA 2340
AGCATTGCAA AGAATTTAGA CACACTTATT GTAGTCCAGT TACAAAGGTT TATCATCCGA 2400
TACATGACCA ATCATGCTAT TTAACCTTAG AGCACAAAAG AAAACTCAAG GCGGAATATG 2460
GGATCGAGCC ATGGACATTT GTGCAAAAGC TAGGTGAAGC GGTGTTTATT CCCGCGGGTT 2520
GTCCTCATCA AGTTCGGAAT CTAAAGTCGT GCACAAAAGT CGCAGTTGAC TTTGTGTCAC 2580
CAGAGAACAT CCATGAGTGT CTGCGTTTGA CCGAAGAGTT TCGCCAACTT CCCAAAAACC 2640
ACAAGGCCAG AGAGGACAAA CTCGAGGCAA GTCTTTTATC TCTTTGA 2688
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0004 Al_scaffold_0002_290 Arabidopsis lyrata 85 0.0 1487
WERAM-Bro-0072 Bo4g092680.1 Brassica oleracea 70 0.0 1183
WERAM-Brr-0135 Bra027055.1-P Brassica rapa 72 0.0 1167
WERAM-Thc-0081 EOY28779 Theobroma cacao 61 0.0 880
WERAM-Prp-0037 EMJ15852 Prunus persica 59 0.0 840
WERAM-Glm-0217 GLYMA17G01410.1 Glycine max 59 0.0 837
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 59 0.0 833
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 59 0.0 832
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 59 0.0 823
WERAM-Met-0115 AES92666 Medicago truncatula 57 0.0 809
WERAM-Pot-0042 POPTR_0004s00770.1 Populus trichocarpa 57 0.0 767
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 48 0.0 684
WERAM-Sei-0128 Si034182m Setaria italica 47 0.0 652
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 47 0.0 651
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 54 0.0 635
WERAM-Orgl-0100 OGLUM09G09380.1 Oryza glumaepatula 54 0.0 634
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 53 0.0 632
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 53 0.0 631
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 51 9e-180 628
WERAM-Aet-0048 EMT13865 Aegilops tauschii 51 5e-178 622
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 51 3e-175 613
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 46 3e-169 593
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 47 1e-168 591
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 54 1e-164 577
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 42 2e-159 560
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 50 2e-159 560
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 50 3e-159 560
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 50 5e-159 559
WERAM-Amt-0041 ERN17369 Amborella trichopoda 48 2e-143 507
WERAM-Brd-0109 BRADI4G29617.1 Brachypodium distachyon 58 4e-140 496
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 61 7e-138 489
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 48 1e-136 484
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 47 2e-136 484
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 41 1e-128 458
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 37 5e-60 230
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 37 6e-60 230
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 37 1e-59 229
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 37 1e-59 229
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 37 2e-59 228
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 36 3e-59 228
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 37 3e-59 228
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 36 3e-59 227
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 37 3e-59 227
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 36 4e-59 227
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 35 4e-59 227
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 36 5e-59 227
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 36 6e-59 226
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 37 6e-59 226
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 36 7e-59 226
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 36 1e-58 226
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 36 1e-58 226
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 36 1e-58 226
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 36 1e-58 225
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 36 2e-58 225
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 36 2e-58 225
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 36 2e-58 225
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 36 2e-58 225
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 36 2e-58 225
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 36 2e-58 225
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 36 2e-58 224
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 36 2e-58 224
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 36 2e-58 224
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 36 2e-58 224
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 36 2e-58 224
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 36 2e-58 224
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 36 2e-58 224
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 36 2e-58 224
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 36 2e-58 224
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 36 2e-58 224
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 36 2e-58 224
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 36 2e-58 224
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 36 2e-58 224
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 37 2e-58 224
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 36 2e-58 224
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 36 3e-58 224
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 36 3e-58 224
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 36 3e-58 224
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 37 4e-58 224
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 36 4e-58 224
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 36 4e-58 224
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 36 4e-58 224
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 36 8e-58 223
Created Date 25-Jun-2016