WERAM Information

Tag Content
WERAM ID WERAM-Bro-0072
Ensembl Protein ID Bo4g092680.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo4g092680 Bo4g092680.1 Bo4g092680.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 1.60e-72 245.1 657 885
Organism Brassica oleracea
Domain Profile
  HDM JHDM2
     JHDM2.txt   4 krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwaeedl...kellksieeee 84 
                   +r+g lN+a klp+ +++pdlgPk+y AyG+  e +r++++t+lh+d+sdavnil++             v   k+k++e++    + +  +  +ee
  Bo4g092680.1 657 PRTGILNIAAKLPEGLIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHtaevtlsqeqisaVKDIKQKHKEQNRfetNGTGVACSQEE 753
                   47899*******************************************************9999999888555555555554400044445567778 PP
     JHDM2.txt  85 ldevtrkrv.qdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipag 176
                   ++++  + + ++ +e+  alW+if+++d++k++e+l+k++ke+++    +v ++++pihdqs+yl+ +++++L+ e+G+e+wt+vQklg+av+ipag
  Bo4g092680.1 754 VEKNMPEILsHENDETGNALWDIFRREDIPKLEEYLRKHCKEFRHayccPVTKVYHPIHDQSCYLTVEHKRKLKAEFGIEPWTFVQKLGEAVFIPAG 850
                   877776655256677778***************************99999999******************************************** PP
     JHDM2.txt 177 apHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                   +pHqv+nlksc kva dFvsPEn+kec+rlt+e+r
  Bo4g092680.1 851 CPHQVRNLKSCTKVAVDFVSPENIKECLRLTEEFR 885
                   *********************************98 PP
Protein Sequence
(Fasta)		MGSVSLEHYS LLMENSLTYS WWTKKKRSFR LFKSKGSASR RGDKEACTSS KPVISRVYCR 60
KRKHSVDDQD LALETNDKRS SKVEAVPKDV KHSSDDDIML SDWITRRRNT VENREDKGKE 120
EVDAKSEDDD DCTILENQSS KRFTSKRKDR RQLELEEDME WEEEVNLISK MKASSRRRRK 180
ASNIPENDTV ATSSQSRSPD SEVLDALLKI GSSDDSTTIR NTSKESKERN AICHQCLKGE 240
RVTLLICREC KDTMYCLQCT RKWYPQLSED HVVDKCPSCR KNCNCSRCLH LNGLIKTSNK 300
ELSSSERRQH LQYLISLMLP FLKKISESQS EEIEIEAKVQ GILPSEVDVN RAVSYCDERV 360
YCDHCATSIV DLHRSCPKCS YELCLKCCQE IRQGSISERP EIKLHYVDKG YKYMHGLEME 420
PSSSSVSEED EEAKPSPQWN VGFNGSITCA PKALGGCGEC TLKLQRILPR MRMSDLEQKA 480
ETLLASYIIS LPRALNCKCS ALETDMRRKA ASRTTSNDNY LFCPDSLDIL KEEELLHFQE 540
HWAKGEPVIA RNVLDSTPGL SWEPMVMWRA LCENADLSTS SSKMSHVRAI DCLSQCEVEV 600
NTRDFFEGYS KGRTYENFWP EMLKLKDWPP SDKFEDLLPR HCDEFISALP FQEYSDPRTG 660
ILNIAAKLPE GLIKPDLGPK TYIAYGIPDE LGRGDSVTKL HCDMSDAVNI LTHTAEVTLS 720
QEQISAVKDI KQKHKEQNRF ETNGTGVACS QEEVEKNMPE ILSHENDETG NALWDIFRRE 780
DIPKLEEYLR KHCKEFRHAY CCPVTKVYHP IHDQSCYLTV EHKRKLKAEF GIEPWTFVQK 840
LGEAVFIPAG CPHQVRNLKS CTKVAVDFVS PENIKECLRL TEEFRQLPKN HKAREDKLEI 900
KKMVIYAIEQ ALIELETLPK ETKPVPNS 928
Nucleotide Sequence
(Fasta)		ATGGGCAGTG TTAGTTTGGA GCATTACAGT CTTCTGATGG AGAATTCTCT AACTTATTCT 60
TGGTGGACCA AGAAGAAGAG AAGTTTTAGA TTATTCAAGT CCAAAGGTTC TGCTAGTAGG 120
AGGGGAGATA AAGAGGCCTG CACGAGCTCC AAGCCTGTGA TATCGAGAGT CTATTGTAGG 180
AAAAGGAAGC ATTCCGTAGA CGATCAAGAT TTAGCGCTTG AAACCAACGA CAAAAGAAGC 240
AGCAAAGTTG AAGCTGTTCC TAAAGATGTG AAACACTCTT CTGATGATGA TATCATGTTA 300
AGTGATTGGA TTACTAGGCG GAGGAACACC GTGGAAAATA GGGAAGATAA GGGCAAAGAA 360
GAAGTTGATG CTAAATCTGA AGATGACGAT GATTGCACAA TATTAGAGAA TCAGAGTTCT 420
AAAAGATTCA CTAGTAAAAG GAAAGACAGG CGCCAACTAG AACTTGAAGA AGACATGGAA 480
TGGGAAGAAG AAGTTAACCT GATTTCTAAG ATGAAGGCAT CATCCCGAAG AAGAAGGAAA 540
GCTTCCAACA TTCCTGAAAA TGACACAGTT GCTACTTCTT CTCAGTCACG TTCGCCAGAT 600
TCAGAAGTAT TAGATGCCCT TTTGAAAATT GGCAGTTCTG ATGACTCCAC AACCATTAGA 660
AATACTTCAA AGGAGTCTAA GGAACGCAAT GCAATTTGCC ACCAGTGCTT GAAAGGGGAA 720
AGGGTAACTC TTCTCATCTG CAGAGAATGT AAAGACACCA TGTATTGTCT TCAATGTACA 780
AGGAAATGGT ATCCACAGTT ATCTGAGGAT CATGTCGTTG ATAAATGTCC TTCCTGCCGC 840
AAAAACTGTA ACTGCAGCAG ATGCTTGCAT TTGAATGGTT TAATCAAGAC ATCGAACAAG 900
GAACTCTCAA GTTCTGAAAG ACGCCAGCAT CTCCAATACT TGATTTCACT GATGCTTCCA 960
TTTCTGAAAA AAATATCTGA ATCCCAGAGT GAAGAGATTG AAATTGAGGC AAAGGTTCAA 1020
GGAATACTGC CATCTGAAGT TGATGTAAAT AGGGCAGTAA GCTACTGTGA TGAACGTGTA 1080
TACTGTGATC ATTGCGCAAC TTCAATCGTT GACTTGCACC GCAGCTGCCC AAAGTGCTCT 1140
TACGAGCTTT GTCTGAAATG CTGCCAAGAG ATTCGCCAAG GATCGATCTC TGAACGCCCT 1200
GAGATAAAGT TACACTATGT TGACAAAGGA TACAAGTATA TGCATGGTCT AGAAATGGAG 1260
CCGAGCTCCT CTTCTGTATC TGAGGAGGAC GAAGAAGCTA AACCATCCCC TCAGTGGAAT 1320
GTTGGTTTCA ACGGAAGCAT CACTTGCGCA CCGAAAGCAC TAGGTGGTTG TGGCGAATGT 1380
ACGTTGAAGC TTCAGCGAAT CTTACCGCGG ATGCGGATGT CAGACTTGGA ACAAAAGGCA 1440
GAGACTCTCT TGGCATCGTA CATTATAAGC CTCCCTAGAG CGTTGAACTG TAAGTGCTCT 1500
GCCTTGGAGA CAGATATGAG AAGGAAAGCA GCTTCGAGGA CGACATCAAA CGACAACTAC 1560
TTGTTCTGTC CTGATTCTCT TGATATCTTG AAGGAAGAAG AGCTTCTGCA TTTCCAAGAG 1620
CATTGGGCTA AAGGTGAACC AGTAATCGCC AGGAACGTTC TTGATAGCAC ACCTGGTTTA 1680
AGCTGGGAGC CGATGGTTAT GTGGCGAGCT TTATGCGAAA ATGCGGATTT ATCAACATCA 1740
AGTTCTAAGA TGTCTCACGT CAGAGCAATT GATTGTTTAT CTCAGTGTGA GGTGGAGGTG 1800
AACACTCGTG ACTTCTTTGA AGGTTATAGC AAGGGAAGAA CTTATGAAAA CTTCTGGCCT 1860
GAGATGTTGA AGCTAAAGGA CTGGCCTCCT TCTGATAAAT TTGAAGACCT TTTACCTCGC 1920
CACTGTGACG AGTTCATATC CGCATTACCT TTCCAAGAAT ATAGCGATCC TAGAACCGGA 1980
ATTCTGAACA TTGCAGCAAA GCTTCCTGAA GGTCTCATCA AACCGGACCT GGGTCCAAAA 2040
ACTTACATTG CCTATGGGAT TCCAGATGAG CTTGGTAGAG GCGATTCCGT GACTAAGCTT 2100
CACTGTGATA TGTCTGATGC GGTTAATATA TTGACGCATA CGGCTGAAGT AACGTTAAGT 2160
CAAGAGCAGA TATCTGCAGT TAAAGATATA AAGCAGAAAC ACAAGGAACA GAACAGGTTC 2220
GAAACAAATG GCACTGGTGT TGCATGTAGC CAAGAGGAAG TAGAAAAGAA CATGCCAGAG 2280
ATTCTGAGCC ATGAAAATGA TGAAACGGGA AATGCCCTTT GGGACATATT TAGGAGAGAA 2340
GATATTCCTA AGTTGGAAGA GTATCTGAGA AAGCATTGTA AAGAGTTTAG GCACGCTTAT 2400
TGTTGCCCAG TCACAAAGGT TTATCATCCG ATACATGACC AATCATGCTA TTTAACCGTT 2460
GAGCATAAAA GAAAACTCAA GGCGGAGTTC GGGATCGAAC CATGGACGTT TGTGCAAAAG 2520
CTAGGAGAAG CGGTGTTTAT TCCTGCGGGC TGTCCTCATC AAGTTCGGAA TCTGAAGTCG 2580
TGCACAAAAG TGGCAGTAGA CTTTGTATCA CCAGAGAACA TTAAAGAGTG TCTGCGTCTG 2640
ACAGAGGAGT TTCGCCAACT TCCCAAGAAC CATAAGGCCA GAGAGGACAA ACTTGAGATA 2700
AAGAAGATGG TGATCTATGC GATCGAGCAA GCTCTCATAG AACTTGAGAC GCTACCAAAA 2760
GAGACCAAAC CAGTGCCCAA TAGTTGA 2788
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0170 Bra034494.1-P Brassica rapa 90 0.0 1234
WERAM-Arl-0004 Al_scaffold_0002_290 Arabidopsis lyrata 71 0.0 1187
WERAM-Art-0023 AT1G62310.1 Arabidopsis thaliana 72 0.0 1163
WERAM-Thc-0081 EOY28779 Theobroma cacao 59 0.0 882
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 60 0.0 847
WERAM-Prp-0037 EMJ15852 Prunus persica 58 0.0 845
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 58 0.0 837
WERAM-Glm-0217 GLYMA17G01410.1 Glycine max 58 0.0 828
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 58 0.0 801
WERAM-Met-0115 AES92666 Medicago truncatula 56 0.0 788
WERAM-Pot-0042 POPTR_0004s00770.1 Populus trichocarpa 55 0.0 749
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 47 0.0 682
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 47 0.0 659
WERAM-Sei-0128 Si034182m Setaria italica 47 0.0 657
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 45 3e-179 626
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 45 1e-177 621
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 51 1e-174 611
WERAM-Aet-0048 EMT13865 Aegilops tauschii 51 2e-173 607
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 52 1e-171 601
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 52 1e-171 601
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 51 1e-169 594
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 44 3e-164 577
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 44 7e-163 572
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 53 9e-162 568
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 40 6e-157 552
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 53 1e-154 545
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 53 8e-150 528
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 53 3e-149 526
WERAM-Brd-0109 BRADI4G29617.1 Brachypodium distachyon 59 4e-147 519
WERAM-Amt-0068 ERN16983 Amborella trichopoda 37 3e-141 500
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 44 2e-137 487
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 61 4e-137 486
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 47 2e-132 471
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 43 1e-128 458
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 38 6e-64 243
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 38 7e-64 243
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 37 6e-63 239
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 37 1e-62 239
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 36 1e-62 238
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 37 2e-62 238
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 37 2e-62 238
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 37 2e-62 238
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 37 2e-62 238
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 37 2e-62 238
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 36 3e-62 238
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 37 3e-62 238
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 37 3e-62 238
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 36 3e-62 238
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 37 3e-62 237
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 37 3e-62 237
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 37 3e-62 237
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 37 4e-62 237
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 37 4e-62 237
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 37 4e-62 237
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 36 4e-62 237
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 37 4e-62 237
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 37 4e-62 237
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 37 4e-62 237
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 37 4e-62 237
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 37 4e-62 237
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 37 4e-62 237
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 37 4e-62 237
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 36 5e-62 237
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 37 5e-62 237
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 37 5e-62 237
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 36 5e-62 237
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 37 5e-62 237
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 37 5e-62 237
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 37 5e-62 237
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 37 5e-62 237
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 37 5e-62 237
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 37 6e-62 236
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 37 6e-62 236
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 37 6e-62 236
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 37 7e-62 236
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 36 8e-62 236
WERAM-Ora-0023 ENSOANP00000003317.1 Ornithorhynchus anatinus 37 1e-61 236
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 36 1e-61 236
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 37 1e-61 235
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 37 2e-61 235
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 36 2e-61 235
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 36 2e-61 235
Created Date 25-Jun-2016