WERAM Information

Tag Content
WERAM ID WERAM-Sob-0100
Ensembl Protein ID Sb07g005500.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb07g005500 Sb07g005500.1 Sb07g005500.1
Sb07g005500 Sb07g005500.2 Sb07g005500.2
Sb07g005500 Sb07g005500.3 Sb07g005500.3
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 7.40e-20 71.6 165 231
Organism Sorghum bicolor
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   6 sepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                    s  F+ pvd + l+++dY+ ii+ PmdL t+k++l +g+Y s e f+ Dvrl fnNa  yn+++++v
  Sb07g005500.1 165 SVWFNSPVDVEgLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSHEAFAGDVRLTFNNALRYNPPDHHV 231
                    5679************************************************************987 PP
Protein Sequence
(Fasta)		MTSAVLAGRN EVHHAHPHHH RHWGGARVPL MPKPSSNPNP RRHHRPGPNP IPTGSPPPRA 60
VPAVAAEPLP SSSGHVKFRP SEMTPAEASL LRARLTGELG RVRAFLSRID SWQDGQRRRR 120
RPEPEHEHAP EPPVGRRSSP PPALVEAMRK RCADILMRLR RSKKSVWFNS PVDVEGLKLH 180
DYRAIIRSPM DLGTVKQNLT AGRYPSHEAF AGDVRLTFNN ALRYNPPDHH VHRYAGNLLA 240
SFEGMYKEAV SWFEQQRQQL EPPMQLDLPP PPPPQMPVSV PVQAPQRMGG GRRPKPKARE 300
PNKREMDEEE KQKLRVEIEN LPEEKMLNVL QIVQKRNSDP ALTGEEVELD FDELDIETLW 360
ELDRFVVNWR KALKKSQRNS MMNGDAAAMN GDAIDVTIVP DDDDMVEVAV NPSVVVEIGE 420
SETDIPKKRE MEAEDEYVDI GDEMPTVNYQ SVEIEPDSPA ASSSSGSGSG SSSSSDSDSD 480
SESDGDDASA PH 492
Nucleotide Sequence
(Fasta)		CCGCAACGCA AACCAGCATC GCCGAACGGG TCGCGCCCGC CCGAGCCCGA TAAGCCCGCG 60
AAGCCCAGGC CCACCCGCGA AGCGATGCGA CGGAGGAGAT CGTGAGATCG CGCGCCGCCG 120
CCGCCCCGCT GCCGCCGGCG ATGACCTCCG CCGTCCTCGC CGGCCGGAAT GAGGTCCACC 180
ACGCGCACCC GCACCACCAC CGCCACTGGG GCGGCGCCCG CGTCCCCCTC ATGCCCAAGC 240
CGTCCTCCAA CCCTAACCCT AGGCGCCACC ACCGCCCGGG CCCAAACCCT ATCCCCACAG 300
GCTCGCCGCC GCCGCGGGCC GTCCCGGCGG TCGCGGCCGA GCCCCTGCCG TCGTCATCGG 360
GGCACGTGAA GTTCAGGCCG TCGGAAATGA CCCCCGCCGA GGCCAGCCTT CTCCGCGCGC 420
GGCTCACCGG CGAGCTCGGC CGCGTCCGCG CTTTCCTCTC CCGCATCGAC TCGTGGCAGG 480
ACGGGCAGCG CCGGCGCCGG CGCCCGGAGC CCGAGCACGA GCACGCGCCG GAGCCCCCCG 540
TCGGGCGCCG CTCGTCCCCG CCGCCGGCGC TGGTGGAGGC GATGCGGAAG CGGTGCGCGG 600
ACATCCTGAT GCGGCTGCGG AGATCGAAGA AGAGCGTGTG GTTCAACTCC CCCGTCGACG 660
TGGAGGGCCT CAAGCTGCAC GACTACCGCG CCATCATACG GAGCCCCATG GATCTCGGCA 720
CCGTCAAGCA GAACCTCACC GCCGGCCGGT ACCCTTCCCA CGAGGCGTTC GCTGGCGACG 780
TCCGGCTCAC CTTCAACAAC GCGCTGCGGT ACAACCCGCC CGACCACCAC GTGCACAGGT 840
ACGCCGGCAA CCTCCTCGCC TCGTTCGAGG GGATGTACAA GGAGGCCGTC TCGTGGTTCG 900
AGCAGCAGCG CCAGCAACTC GAGCCACCAA TGCAGCTTGA TCTGCCGCCA CCGCCACCAC 960
CACAGATGCC AGTTTCTGTG CCAGTGCAAG CGCCCCAGAG GATGGGGGGT GGGAGGAGGC 1020
CCAAGCCCAA GGCGAGGGAG CCAAACAAGA GGGAGATGGA TGAGGAGGAG AAGCAGAAGC 1080
TGAGGGTGGA GATTGAGAAC CTGCCTGAGG AGAAGATGCT GAATGTGCTG CAGATTGTGC 1140
AGAAGAGGAA CAGTGATCCA GCATTGACGG GGGAGGAGGT GGAGCTTGAT TTTGATGAGC 1200
TGGATATCGA GACCCTGTGG GAGCTTGATC GATTTGTGGT CAATTGGAGG AAGGCGCTAA 1260
AGAAGAGCCA GCGGAATTCT ATGATGAATG GTGATGCTGC TGCCATGAAT GGAGACGCCA 1320
TTGATGTGAC AATTGTTCCG GATGATGATG ACATGGTCGA GGTTGCTGTC AATCCGTCTG 1380
TGGTGGTTGA AATTGGAGAG TCGGAGACTG ACATTCCAAA GAAGAGGGAA ATGGAAGCGG 1440
AGGACGAGTA TGTTGATATA GGTGACGAGA TGCCAACGGT GAATTACCAG TCGGTGGAGA 1500
TTGAGCCAGA TTCCCCGGCA GCTAGCAGCT CAAGCGGATC AGGAAGTGGC TCATCTTCAT 1560
CCAGTGATTC TGACTCGGAC TCTGAATCTG ATGGGGATGA TGCAAGCGCC CCGCACTAGG 1620
TGGTTGCTCT TTTATCTGAC TGTAGGATTA GTGATGAGTA GGTGACTGAG GTTCCATTGG 1680
GTGAGGCATT TTGAAGAATG GTATAGCAAA TTGGAGGGGC TCTTGTTGAT GCAAGTCGTT 1740
GTCAGGTGTG TTCGTTTGTG TATGTGGGTG CAGCTTAGGT TGTCGGTACT TGGTAGTGAA 1800
TAGGTAGATG CTTGGGTAGA TTGGGAGACT ACTGTAAAGA AGGGAATATA ATCTGGAATG 1860
GAACTAAGAG GAAAAGTAGC AATGCCTTGG CATTTCATTA TGTCTGTTGC TTTCTTTGTA 1920
CATGTTTATT ACTGCAGTAG CCGATCTATT GTGC 1955
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0049 Si013657m Setaria italica 80 2e-159 559
WERAM-Zem-0096 GRMZM2G171311_P01 Zea mays 83 8e-159 557
WERAM-Orni-0089 ONIVA08G05380.1 Oryza nivara 66 2e-130 463
WERAM-Ori-0097 BGIOSGA028129-PA Oryza indica 66 3e-130 462
WERAM-Ors-0080 OS08T0192800-01 Oryza sativa 66 5e-130 461
WERAM-Orr-0093 ORUFI08G06010.1 Oryza rufipogon 66 5e-130 461
WERAM-Org-0089 ORGLA08G0046500.1 Oryza glaberrima 66 7e-130 461
WERAM-Orp-0086 OPUNC08G05270.1 Oryza punctata 66 4e-129 459
WERAM-Orm-0083 OMERI08G05220.1 Oryza meridionalis 66 2e-127 453
WERAM-Lep-0089 LPERR08G05150.1 Leersia perrieri 61 5e-127 451
WERAM-Orgl-0087 OGLUM08G05670.1 Oryza glumaepatula 65 6e-127 451
WERAM-Orb-0090 OBART08G05410.1 Oryza barthii 62 1e-120 431
WERAM-Brd-0075 BRADI3G14940.1 Brachypodium distachyon 60 5e-120 428
WERAM-Orbr-0097 OB08G15510.1 Oryza brachyantha 73 3e-109 392
WERAM-Orl-0096 KN540796.1_FGP002 Oryza longistaminata 70 3e-107 386
WERAM-Aet-0027 EMT12940 Aegilops tauschii 56 2e-82 304
WERAM-Hov-0040 MLOC_39251.1 Hordeum vulgare 55 2e-81 300
WERAM-Mua-0034 GSMUA_Achr1P15650_001 Musa acuminata 39 3e-64 243
WERAM-Pot-0106 POPTR_0009s08350.1 Populus trichocarpa 35 3e-55 213
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 37 1e-45 181
WERAM-Amt-0025 ERN13953 Amborella trichopoda 38 1e-42 171
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 38 9e-41 165
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 40 9e-41 165
WERAM-Brr-0160 Bra032431.1-P Brassica rapa 42 2e-40 164
WERAM-Prp-0041 EMJ12560 Prunus persica 38 3e-39 160
WERAM-Bro-0162 Bo8g114680.1 Brassica oleracea 40 1e-37 155
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 38 2e-37 154
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 39 1e-36 152
WERAM-Met-0106 AES89759 Medicago truncatula 38 6e-32 136
WERAM-Thc-0024 EOX98601 Theobroma cacao 42 8e-29 125
WERAM-Arl-0033 fgenesh1_pm.C_scaffold_2001298 Arabidopsis lyrata 31 2e-28 124
WERAM-Sol-0021 Solyc01g106280.2.1 Solanum lycopersicum 56 3e-26 117
WERAM-Sot-0041 PGSC0003DMT400039290 Solanum tuberosum 35 8e-26 115
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 29 1e-25 115
WERAM-Art-0152 AT5G65630.1 Arabidopsis thaliana 49 2e-25 114
WERAM-Gam-0156 ENSGMOP00000015464.1 Gadus morhua 32 9e-22 102
WERAM-Asm-0076 ENSAMXP00000007951.1 Astyanax mexicanus 46 3e-19 94.0
WERAM-Orla-0126 ENSORLP00000015257.1 Oryzias latipes 47 3e-19 94.0
WERAM-Myl-0058 ENSMLUP00000004658.2 Myotis lucifugus 46 4e-19 93.6
WERAM-Dar-0210 ENSDARP00000129878.1 Danio rerio 46 6e-19 93.2
WERAM-Caf-0204 ENSCAFP00000029360.4 Canis familiaris 45 6e-19 92.8
WERAM-Bot-0103 ENSBTAP00000013992.5 Bos taurus 45 7e-19 92.8
WERAM-Ere-0086 ENSEEUP00000008250.1 Erinaceus europaeus 45 7e-19 92.8
WERAM-Tut-0064 ENSTTRP00000005012.1 Tursiops truncatus 45 8e-19 92.8
WERAM-Mup-0137 ENSMPUP00000012092.1 Mustela putorius furo 45 8e-19 92.8
WERAM-Loa-0079 ENSLAFP00000005884.3 Loxodonta africana 45 8e-19 92.4
WERAM-Eqc-0172 ENSECAP00000019196.1 Equus caballus 45 9e-19 92.4
Created Date 25-Jun-2016