WERAM Information

Tag Content
WERAM ID WERAM-Sob-0020
Ensembl Protein ID Sb02g006980.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g006980 Sb02g006980.1 Sb02g006980.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 6.60e-11 43.1 188 237
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    t+C  C+  ++ +++++ Cd C++wfH+kCv ++  ++++ k++ Cp C 
  Sb02g006980.1 188 TLCGSCSGLYNSSEFWIGCDICERWFHGKCVRITPAKAEQIKHYKCPDCS 237
                    78****888888889*******************555554489******7 PP
Protein Sequence
(Fasta)		MEMAGPVSSA PRTVEDIYKD YTGRRAGLVR ALTSDVDEFY SMCDPEKENL CLYGHPNGGW 60
EVSLPVEEVP PEMPEPALGI NFARDGMKRR DWLSLVAVHS DAWVVSVAFF FAAKLNANER 120
KRLFNMINEH PSVYETMTER KGRENKPGVD NSSKSRHSTK RSNDGKTKNS RVAVVEDGYG 180
DDDEHSETLC GSCSGLYNSS EFWIGCDICE RWFHGKCVRI TPAKAEQIKH YKCPDCSYKK 240
SGRQ 244
Nucleotide Sequence
(Fasta)		CTGAACCAGA AACCCCTCGC TGCCCAACCG GAGGCGCCGC CGACACAGCC CCCGCGCCGC 60
CGCCGCAGCC GCTGATGGAG ATGGCCGGCC CCGTCTCCTC AGCGCCCCGG ACCGTCGAGG 120
ACATCTACAA GGACTACACC GGCCGCCGCG CCGGCCTCGT CCGCGCTCTC ACCTCCGATG 180
TGGACGAGTT CTACAGCATG TGCGACCCAG AGAAGGAGAA CCTGTGCCTG TACGGTCACC 240
CGAACGGCGG CTGGGAGGTG TCCCTGCCGG TGGAGGAAGT GCCGCCGGAG ATGCCCGAGC 300
CGGCGCTCGG GATCAACTTC GCCAGGGACG GCATGAAGCG CCGCGACTGG CTCTCGCTCG 360
TCGCCGTGCA CTCCGACGCC TGGGTCGTCT CCGTCGCATT CTTCTTCGCC GCCAAACTCA 420
ACGCCAACGA GAGGAAGCGC TTATTCAACA TGATTAATGA ACATCCATCT GTGTATGAAA 480
CAATGACTGA ACGGAAGGGA AGGGAGAATA AGCCTGGTGT TGATAACAGC AGCAAATCTA 540
GGCACTCAAC AAAGCGATCA AATGATGGCA AGACAAAGAA CTCAAGAGTG GCAGTTGTCG 600
AAGATGGGTA TGGGGATGAT GATGAACACA GTGAAACCCT TTGCGGGTCC TGCAGTGGTC 660
TCTACAACTC AAGCGAGTTC TGGATTGGAT GCGACATTTG CGAGCGGTGG TTCCACGGCA 720
AATGCGTGAG GATAACTCCA GCGAAAGCGG AACAGATAAA GCACTACAAG TGTCCTGATT 780
GCAGCTACAA GAAAAGCGGC AGGCAATAAA AACCGTGAGG CTGCTGCTGG CCTCCTATTG 840
CTGACTCAGC TGATCAACCA AACCATACTC TCTCTCCAAG TTGGCCGTAG ATGTTAATTA 900
CCCTAGGCAT TTCTTCTTTG TTGTGGTAGA TGCTGGAAAA AAGACATATA CAGGATAGTT 960
GATCTTACAG ACTGGTCCAT TGCTTTTGTG CTTGTTTCAT TGACACCTGT TTACTGGCCA 1020
TGTCTTGGAA TGTCATTTGT TGATACATGC CTTGTTTAGT TTCAAAAAAT TTTCAAGATT 1080
TCTCGTC 1088
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0036 GRMZM2G047316_P01 Zea mays 91 5e-111 397
WERAM-Sei-0119 Si030965m Setaria italica 85 4e-105 377
WERAM-Lep-0074 LPERR07G06880.1 Leersia perrieri 79 2e-100 362
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 78 1e-98 356
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 78 1e-98 356
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 78 1e-98 356
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 78 3e-98 355
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 78 3e-98 355
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 78 3e-98 355
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 78 5e-98 354
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 78 2e-97 352
WERAM-Orbr-0082 OB07G15980.1 Oryza brachyantha 77 1e-92 336
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 76 2e-92 335
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 71 2e-87 319
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 74 2e-87 319
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 73 7e-86 313
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 70 1e-84 310
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 71 3e-84 308
WERAM-Sol-0125 Solyc10g076690.1.1 Solanum lycopersicum 69 7e-83 303
WERAM-Sot-0057 PGSC0003DMT400049364 Solanum tuberosum 68 1e-82 303
WERAM-Thc-0059 EOY07191 Theobroma cacao 69 4e-81 298
WERAM-Amt-0010 ERN05231 Amborella trichopoda 69 4e-81 298
WERAM-Prp-0083 EMJ07006 Prunus persica 70 4e-81 298
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 67 2e-80 296
WERAM-Met-0092 KEH28874 Medicago truncatula 69 1e-79 293
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 65 8e-77 283
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 66 4e-76 281
WERAM-Brr-0166 Bra034169.1-P Brassica rapa 64 8e-76 280
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 66 2e-75 279
WERAM-Aet-0107 EMT22745 Aegilops tauschii 71 5e-71 264
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 71 1e-69 259
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 62 3e-69 258
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 62 3e-69 258
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 58 1e-68 256
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 59 2e-68 255
Created Date 25-Jun-2016