WERAM Information

Tag Content
WERAM ID WERAM-Pot-0124
Ensembl Protein ID POPTR_0011s04100.1
Gene Name POPTR_0011s04100g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0011s04100 POPTR_0011s04100.1 POPTR_0011s04100.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 2.50e-47 162.4 600 856
Organism Populus trichocarpa
Domain Profile
  HDM JHDM2
           JHDM2.txt   6 dgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.................................... 60 
                          g lN+a  l + + + dlgP ly  yG  ++  + +++t+l+ +  d+vnil +                                    
  POPTR_0011s04100.1 600 SGVLNIAADLGQETSKSDLGPCLYISYGSGENLSQADSVTKLRYNSYDVVNILAHatdvpvstkqlnyirkedmqvnkkvarvswfsaarh 690
                         799***********************************************************************************99999 PP
           JHDM2.txt  61 .................vgilkkkwaeedlkellksieee..eldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga...e 129
                                           g+    +  +   +     + e  +    t +++ +  e+ ga W++f+++d++k+ e+l+++s+e+ +    
  POPTR_0011s04100.1 691 ethasnlkdrdvfhdgdSGSDS--DSDS---DSHTDTDTEfhGNHSETSNHFIS--ESCGAQWDVFRKQDVPKLVEYLRRHSNEFTHtygF 774
                         9998877777766543222221..2222...22222222221223344445544..456**************************997764 PP
           JHDM2.txt 130 vppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                         +++ ++pi dq+++ld+++++rL+ee+ +e+w + Q  g+av++pag+p q++nlkscv+v  dF+sPEnv+ec++l+ e+r
  POPTR_0011s04100.1 775 QKHMVHPILDQNFFLDAYHKMRLKEEFKIEPWSFDQHVGEAVIVPAGCPYQIRNLKSCVSVVLDFLSPENVTECIQLMDELR 856
                         66689*************************************************************************9986 PP
Protein Sequence
(Fasta)		MEALPDHLRC KRTDGRQWRC NRRVMEDKKL CEIHHLQGRH RQYRRKVPEN LKLQRKKSKK 60
SATSSSNAET LIRVSSKEGK LGKFKKKGKK LKRGDLQLDL IRMVLQKEME KRKSKKRKSF 120
SEKSEEGEGE ELMRNLPNGF MAISPAKSFG NGNVGCSSSH CDIKIGGDVF NGASTARRCF 180
RSKNVEPMPI GKLQVLPYKR DGVRLRKGKR KKCHWCRSST RTLIRCSSCR KEYYCLDCIK 240
EQYLETQEEV RRECPMCRGT CSCKVCSAIQ CRDIACKDLS KEKSEVDNVL HFHYLICMLL 300
PILKQINQDQ SIELEIEAKI KGQKPSEVQI QQAEVSCNKQ CCCNNCKTSI VDFHRSCPEC 360
SYNLCLSCCR DIFHGGVHGG VKTLLCKCPN GRKACCGGSL LDLSCIFPLC WTKDLEVNAE 420
ELVGCYELPE TLDVRSCCSL CVGMDCESNG IEQLQEAAAR EDSGDNLLYY PTIIDVRSDN 480
LEHFQKHWGR GQPVIVRNVL QSTSDLSWDP IVMFCNYLKN NAARSQNGQA TDCSDWFEVE 540
IGIRQMFMGS FKGLTNANIW HEKLKLKGLL SSYLFQEHFP VHYSHVLQAL PLPEYMDPIS 600
GVLNIAADLG QETSKSDLGP CLYISYGSGE NLSQADSVTK LRYNSYDVVN ILAHATDVPV 660
STKQLNYIRK EDMQVNKKVA RVSWFSAARH ETHASNLKDR DVFHDGDSGS DSDSDSDSHT 720
DTDTEFHGNH SETSNHFISE SCGAQWDVFR KQDVPKLVEY LRRHSNEFTH TYGFQKHMVH 780
PILDQNFFLD AYHKMRLKEE FKIEPWSFDQ HVGEAVIVPA GCPYQIRNLK SCVSVVLDFL 840
SPENVTECIQ LMDELRQLPE NHKAKVDSLE VKKMALHSIS RAVRKIHELT RAETSMDLNG 900
Nucleotide Sequence
(Fasta)		AGTCTTACTC CCTTCGCTCT CTCTAATAAA AATCCCAACT TTCTGTCACT TTCCCGAGAA 60
ACATCAGGAC TTTCCGGGAA AATTTCCAAA CTTTTCTTTT TTAATGGAGG CACTACCGGA 120
CCACCTCCGT TGCAAGAGAA CAGACGGCCG GCAATGGCGG TGCAACCGGC GGGTGATGGA 180
GGATAAGAAG CTCTGTGAAA TTCACCACCT TCAAGGCCGC CATAGGCAGT ATAGAAGGAA 240
AGTTCCAGAG AATTTGAAAT TGCAGAGAAA GAAGAGCAAG AAATCAGCAA CATCAAGTTC 300
TAATGCTGAA ACCCTAATTA GGGTTTCTTC AAAAGAGGGG AAATTAGGGA AATTTAAGAA 360
GAAAGGAAAG AAATTGAAGA GAGGGGATTT ACAGTTGGAT TTGATTAGGA TGGTTTTACA 420
GAAAGAAATG GAGAAGAGGA AGAGTAAGAA AAGGAAAAGT TTTTCAGAGA AAAGTGAAGA 480
AGGAGAAGGA GAAGAGTTAA TGAGAAATTT GCCAAATGGG TTCATGGCAA TATCACCTGC 540
TAAGAGTTTT GGGAATGGCA ATGTGGGTTG TTCTAGTTCA CATTGTGATA TTAAGATTGG 600
AGGAGATGTT TTTAACGGGG CTAGTACTGC TAGAAGATGT TTTAGGTCTA AAAATGTTGA 660
GCCAATGCCA ATTGGGAAAT TGCAGGTTTT GCCGTATAAG AGGGATGGAG TGAGATTGAG 720
GAAGGGGAAG AGGAAGAAGT GCCACTGGTG TAGGAGTAGT ACGAGGACAT TGATTAGGTG 780
TTCGAGTTGT CGGAAAGAGT ATTATTGTTT GGATTGCATC AAAGAGCAGT ATTTGGAAAC 840
ACAAGAAGAA GTTAGGAGGG AATGTCCTAT GTGTCGTGGA ACTTGCAGCT GTAAGGTCTG 900
CTCAGCGATT CAATGTAGGG ACATTGCATG TAAGGACTTG TCCAAGGAGA AAAGTGAAGT 960
AGACAACGTT TTACATTTTC ATTATTTGAT TTGCATGCTT CTTCCCATAC TGAAACAAAT 1020
AAATCAAGAT CAGAGCATTG AGCTAGAAAT AGAGGCGAAA ATAAAAGGCC AGAAGCCTTC 1080
TGAAGTTCAA ATCCAGCAGG CTGAAGTCAG CTGCAATAAG CAATGTTGCT GCAATAACTG 1140
CAAGACTTCC ATAGTGGATT TCCATAGGAG CTGTCCTGAG TGTTCCTATA ACCTTTGCTT 1200
AAGTTGTTGT CGGGATATTT TTCATGGGGG CGTACATGGA GGTGTTAAAA CTCTTTTATG 1260
CAAATGTCCA AATGGAAGGA AAGCTTGTTG TGGTGGTAGC CTACTTGATT TGAGTTGCAT 1320
TTTCCCCTTA TGTTGGACAA AAGATCTGGA AGTAAATGCA GAAGAATTAG TTGGCTGCTA 1380
TGAGTTACCA GAAACCTTGG ATGTTCGATC ATGTTGCTCA TTATGTGTTG GGATGGATTG 1440
TGAATCTAAC GGGATTGAAC AGCTGCAAGA AGCAGCTGCA AGAGAAGATT CTGGTGATAA 1500
CCTTTTATAT TATCCAACCA TCATTGATGT TCGCAGTGAT AACCTAGAAC ACTTTCAGAA 1560
GCACTGGGGC AGAGGTCAGC CTGTGATAGT TCGTAATGTG CTTCAGAGTA CATCTGATTT 1620
GAGTTGGGAT CCAATAGTCA TGTTCTGCAA TTATCTTAAG AATAATGCTG CCAGATCTCA 1680
AAATGGGCAA GCTACAGATT GCTCGGACTG GTTTGAGGTA GAAATTGGTA TAAGACAGAT 1740
GTTTATGGGG TCTTTTAAGG GCCTGACGAA TGCCAACATA TGGCATGAGA AGCTGAAATT 1800
GAAGGGTTTG CTTTCTTCTT ATTTATTCCA AGAACATTTT CCAGTTCATT ATAGTCACGT 1860
CCTTCAGGCT CTACCACTTC CAGAATACAT GGACCCCATT TCAGGTGTTC TAAACATTGC 1920
TGCAGATTTG GGGCAGGAAA CCTCAAAGTC TGATCTGGGT CCTTGTCTTT ATATCTCATA 1980
TGGAAGTGGT GAGAATCTTT CACAGGCTGA TTCTGTGACA AAACTGCGTT ATAATTCATA 2040
TGATGTGGTT AATATTTTGG CACATGCTAC TGATGTCCCT GTATCTACAA AACAGCTTAA 2100
TTACATAAGA AAAGAAGATA TGCAAGTAAA CAAGAAAGTT GCTAGAGTAT CCTGGTTCTC 2160
TGCTGCAAGA CATGAAACTC ATGCTTCAAA TCTGAAAGAT AGAGACGTGT TCCATGATGG 2220
GGATTCTGGT TCTGATTCTG ATTCTGATTC TGATTCTCAC ACTGATACTG ATACTGAATT 2280
TCATGGGAAT CACTCGGAGA CTTCCAATCA TTTCATTTCC GAGTCTTGTG GTGCCCAATG 2340
GGATGTCTTT CGTAAACAGG ATGTTCCCAA GCTTGTAGAA TACCTTAGAA GGCACTCTAA 2400
TGAGTTCACT CACACATACG GCTTCCAAAA GCATATGGTT CATCCAATAC TTGATCAGAA 2460
TTTCTTTCTT GATGCATATC ATAAAATGAG ACTGAAGGAG GAGTTCAAAA TTGAACCCTG 2520
GAGTTTTGAT CAACATGTTG GAGAAGCAGT GATTGTTCCT GCTGGATGCC CATACCAAAT 2580
TAGAAATCTT AAGTCATGCG TCAGCGTGGT TCTGGACTTC CTCTCGCCAG AAAATGTTAC 2640
TGAATGCATT CAGTTGATGG ATGAATTACG ACAACTTCCA GAGAACCATA AGGCCAAAGT 2700
TGACAGTTTA GAGGTGAAGA AAATGGCATT GCACAGTATC AGTAGAGCAG TCAGAAAAAT 2760
TCATGAGCTT ACAAGGGCAG AGACCAGCAT GGACCTCAAT GGCTAACTGC AAGGACTGAA 2820
AACGGAAAGA TAATTCATAG AAGGGAAGAA CCTGACGTGG AGGCATTGAG CTTCTGCTGC 2880
TGTTACAAAA TGAATCGTGC AGGGTATTGG TCTCTGCTGC GACTGCTTTT TTTTTTTTTT 2940
TTTTTTTGCA TGCAGAAATT TTGATAGATC TCCGTCTCCT CAATGATTAA AAGGCTAATT 3000
TTCGCAGATC TCTCATTCAT GGTGAAAAAC ACCAACTTTT TGTTATCAAA AATTTGCATT 3060
GGTTTCCTCA TTTACTGCAA CAACTTGTAC ATGGGTTCAT TAAGGTTAGC ATTTTCTCCC 3120
CTTGCTGCAA CAGCACGTAT ATTTGATCGA TCTGTTCGAC TGTATATAAT GACTAATCAG 3180
TTTGGTT 3188
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0080 EOY28452 Theobroma cacao 54 0.0 965
WERAM-Prp-0024 EMJ14883 Prunus persica 55 0.0 951
WERAM-Sol-0028 Solyc02g079300.2.1 Solanum lycopersicum 42 0.0 714
WERAM-Glm-0080 GLYMA07G30840.2 Glycine max 46 0.0 678
WERAM-Viv-0002 VIT_00s0203g00110.t01 Vitis vinifera 55 2e-151 534
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 36 7e-124 442
WERAM-Met-0165 KEH24644 Medicago truncatula 36 1e-123 441
WERAM-Brr-0086 Bra016801.1-P Brassica rapa 38 3e-123 440
WERAM-Arl-0042 fgenesh2_kg.1__ 1301__ AT1G11950.1 Arabidopsis lyrata 38 1e-122 438
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 37 8e-121 432
WERAM-Bro-0072 Bo4g092680.1 Brassica oleracea 38 9e-121 432
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 36 8e-116 416
WERAM-Orr-0028 ORUFI02G39830.1 Oryza rufipogon 34 2e-109 394
WERAM-Amt-0068 ERN16983 Amborella trichopoda 36 2e-109 394
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 33 6e-107 386
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 35 2e-105 381
WERAM-Orgl-0100 OGLUM09G09380.1 Oryza glumaepatula 34 3e-104 377
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 34 4e-104 376
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 34 2e-103 374
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 34 1e-102 372
WERAM-Tra-0233 Traes_5DL_9DCF29857.2 Triticum aestivum 37 4e-99 360
WERAM-Aet-0048 EMT13865 Aegilops tauschii 37 4e-98 357
WERAM-Sei-0128 Si034182m Setaria italica 40 5e-96 350
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 33 7e-96 349
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 36 6e-95 346
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 39 1e-94 345
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 32 5e-92 336
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 32 7e-92 336
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 35 6e-87 320
WERAM-Orp-0036 OPUNC03G20970.1 Oryza punctata 35 7e-86 316
WERAM-Brd-0031 BRADI1G62640.1 Brachypodium distachyon 31 7e-85 313
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 38 1e-77 289
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 32 9e-66 249
WERAM-Org-0036 ORGLA03G0163900.1 Oryza glaberrima 33 7e-62 236
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 27 7e-33 140
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 27 1e-30 132
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 27 2e-30 132
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 28 3e-30 131
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 27 3e-30 131
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 27 4e-30 130
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 27 5e-30 130
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 27 5e-30 130
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 27 6e-30 130
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 27 1e-29 129
WERAM-Pes-0047 ENSPSIP00000007045.1 Pelodiscus sinensis 26 2e-28 125
WERAM-Ora-0091 ENSOANP00000016437.2 Ornithorhynchus anatinus 26 2e-27 122
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 27 3e-27 121
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 27 3e-27 121
WERAM-Cii-0009 ENSCINP00000003397.3 Ciona intestinalis 25 4e-27 121
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 27 5e-27 120
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 27 6e-27 120
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 27 6e-27 120
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 27 6e-27 120
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 27 6e-27 120
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 27 6e-27 120
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 27 6e-27 120
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 27 6e-27 120
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 27 7e-27 120
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 27 7e-27 120
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 27 7e-27 120
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 27 7e-27 120
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 27 7e-27 120
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 27 8e-27 120
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 26 8e-27 120
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 27 8e-27 120
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 27 8e-27 120
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 27 8e-27 120
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 27 8e-27 120
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 27 8e-27 120
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 27 8e-27 120
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 27 8e-27 120
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 27 9e-27 120
Created Date 25-Jun-2016