WERAM Information

Tag Content
WERAM ID WERAM-Pot-0028
Ensembl Protein ID POPTR_0002s11940.1
Gene Name POPTR_0002s11940g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0002s11940 POPTR_0002s11940.1 POPTR_0002s11940.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.40e-11 44.3 674 774
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsC 50 
                          iC vC +d+ +   ++ Cd+C+  fH +Cv+l+   +peg +w+Cp C
  POPTR_0002s11940.1 674 YICSVC-HDGGD---LIVCDHCPSTFHKNCVGLE--DIPEG-EWFCPPC 715
                         68****.55555...9******************..*****.******9 PP
             PHD.txt   3 iClvCgkddegeke.......mvqCdeCddwfHlkCvklp.....lsslpegkswyCpsC 50 
                         +C +Cg+++++ +        ++ Cd+C++ +H+ C+  +     +++ p++ sw+C + 
  POPTR_0002s11940.1 716 CCGICGENKFKYNVqepkdsrLLSCDQCERKYHIGCLRNKgvvklKRKDPKD-SWFCSNK 774
                         8999975555522233456679*****************9998866666677.9***864 PP
Protein Sequence
(Fasta)		PNGKLHQFPT GIRKKRSSVF DQETASSRKL NQQESVINKE SKGALNILSV LCTTLCKFSH 60
PQTMAVFKEF RVTMQFRVNQ KVEIRTQESG FHGSWMRATV IDSSKQSYHV QYDNLLQLED 120
GAEKLVEVVT LTPTNTVSSS RLRPLPPMVS FGVFDLSYGL CVDVYDKGSW LEGVIFDHED 180
GSNERIVLLL ESGGERKIKI ESLRIGQEWD VFTGVWKLKG TWPLIGLFEG CEKDQSVLYG 240
TRMIVDSIPR ENPLIDHEGG GMVMNAVDSD DVVLANSDKD SCNRVDMVTD CKRMDVVDSD 300
GVFKDGSQVV ITSKNPANGD CMSIGDSNGE GLLGANGKRL GKRGRKSAQK GFGWVPAGPD 360
LLPAAEFCPG AITRYASHGN QRPTEPLLID VRKHLAYVGW KIECKKYGSA YKFRYTSPDG 420
SKTYFSLRLL CLDMRDPTIE NSSLISQDLI NDVKKSSGID CPRKSKRTDE FSQFPSRADS 480
QGRNDDVGLL GDSELRHQQD QNASLPRPRR EKTIETLKKL RDYQKSHQEQ NASPLKQRRG 540
KKRQSSRTAM QGVTPRSSKC KPRCALSWMI DNNLVSPGEK VSYRGSKGPG ELTRGRITRE 600
GIECNCCQKI FTLTGFESHA GSTNHRPAAN IILEDGRSLL DCQRKKKPRI KMQRVTREAK 660
WKGRQNQHQG ETDYICSVCH DGGDLIVCDH CPSTFHKNCV GLEDIPEGEW FCPPCCCGIC 720
GENKFKYNVQ EPKDSRLLSC DQCERKYHIG CLRNKGVVKL KRKDPKDSWF CSNKCEDIFI 780
GLQTLLGKSV VVGPDNLTWT LWKFMDSDSC DVEAPTGKHS KLDLAVEVIH ECFEPATETY 840
TGRDIAEDVI FSRECNLNRL NFRGFYTVLL ERNDELIAVA NVRVFGDKVA EIPLVGTRFL 900
FRRLGMCKIL MDELEKQLMN LGVERLMLPA VPSVLYTWIN GFGFSKLTDA EKMQYLDHTF 960
LDFPGTIKCQ KVLL 974
Nucleotide Sequence
(Fasta)		CCAAATGGGA AGCTGCATCA GTTTCCAACA GGAATACGGA AAAAGAGAAG TTCTGTATTC 60
GACCAGGAAA CGGCTTCAAG TCGAAAACTA AATCAACAAG AATCAGTGAT AAATAAGGAA 120
AGCAAAGGGG CTTTAAATAT TCTCTCCGTT CTTTGCACCA CGCTATGTAA ATTCTCTCAC 180
CCACAAACCA TGGCGGTGTT TAAGGAATTT AGAGTCACAA TGCAGTTTAG GGTAAACCAA 240
AAGGTTGAGA TTAGAACCCA AGAAAGTGGT TTTCATGGTT CATGGATGAG AGCCACAGTT 300
ATTGATTCAA GCAAGCAATC TTATCACGTC CAATACGACA ATTTGCTTCA ACTGGAAGAT 360
GGTGCTGAAA AACTAGTGGA AGTTGTTACC TTGACACCCA CTAATACTGT TTCTTCTTCC 420
CGGTTAAGGC CATTGCCACC AATGGTCAGT TTTGGGGTCT TTGATTTGTC TTATGGGCTG 480
TGTGTGGATG TTTACGATAA GGGATCTTGG TTGGAAGGTG TGATCTTTGA TCATGAAGAT 540
GGTTCTAATG AGAGGATTGT TCTTTTGCTA GAATCCGGGG GAGAGAGAAA GATAAAGATT 600
GAGTCTTTAA GGATTGGTCA AGAATGGGAT GTGTTTACTG GGGTTTGGAA GCTTAAGGGA 660
ACATGGCCAT TAATTGGGTT ATTCGAGGGG TGTGAGAAAG ATCAATCGGT TCTTTACGGG 720
ACTCGTATGA TTGTTGATTC AATTCCTAGG GAAAATCCAT TGATTGATCA TGAGGGTGGT 780
GGGATGGTAA TGAATGCAGT TGATTCCGAT GATGTGGTTT TGGCAAACTC TGATAAGGAC 840
TCATGCAATA GGGTTGATAT GGTGACTGAT TGTAAGAGAA TGGACGTTGT GGATTCTGAT 900
GGGGTTTTCA AAGATGGTTC TCAGGTTGTT ATTACTAGTA AGAATCCGGC TAATGGGGAC 960
TGTATGTCGA TCGGTGATTC TAATGGTGAA GGATTATTGG GTGCTAATGG GAAAAGGCTT 1020
GGAAAGAGAG GGAGAAAGTC AGCGCAGAAA GGCTTTGGGT GGGTTCCTGC TGGTCCTGAC 1080
CTGTTACCTG CAGCTGAGTT CTGTCCTGGT GCCATCACAA GATATGCTTC TCATGGCAAT 1140
CAACGGCCAA CGGAACCTCT TTTGATAGAT GTTAGGAAGC ACCTTGCATA TGTTGGCTGG 1200
AAAATTGAGT GCAAGAAATA TGGCAGCGCA TACAAATTTC GGTATACCTC ACCAGATGGT 1260
AGCAAGACTT ACTTTTCTCT CCGTCTGCTT TGTCTGGATA TGAGGGATCC CACAATTGAG 1320
AACTCTTCTC TAATTTCCCA AGACTTGATC AACGATGTTA AGAAGTCCTC TGGCATAGAC 1380
TGTCCTAGAA AGAGTAAGAG AACGGATGAG TTCTCGCAGT TTCCATCTAG AGCTGATTCT 1440
CAGGGAAGAA ATGATGATGT TGGGTTATTA GGTGATTCTG AGCTGAGGCA CCAGCAGGAT 1500
CAAAATGCCA GTCTTCCGAG GCCAAGGAGA GAAAAGACAA TTGAAACTCT AAAGAAGCTT 1560
AGAGATTATC AGAAAAGTCA TCAAGAACAA AATGCCAGCC CTCTAAAGCA AAGGAGAGGA 1620
AAGAAACGAC AATCAAGCAG AACAGCAATG CAGGGAGTGA CTCCAAGGTC CTCAAAGTGC 1680
AAACCTCGTT GTGCCTTATC TTGGATGATC GACAACAATT TGGTGTCGCC GGGGGAAAAA 1740
GTGAGTTATC GTGGAAGCAA GGGCCCCGGT GAATTGACAA GAGGGAGGAT AACTCGTGAG 1800
GGGATTGAAT GCAACTGTTG CCAGAAGATT TTTACTCTCA CTGGCTTTGA ATCTCATGCT 1860
GGAAGCACCA ATCACAGACC AGCTGCTAAT ATAATATTGG AAGATGGCAG GAGCTTGTTA 1920
GATTGCCAAA GAAAGAAGAA ACCCCGGATT AAGATGCAAA GGGTCACGAG AGAGGCTAAG 1980
TGGAAAGGGA GACAAAATCA ACATCAAGGT GAGACTGACT ACATTTGTTC TGTTTGTCAT 2040
GATGGAGGCG ATTTAATTGT ATGCGATCAT TGCCCATCTA CATTCCACAA AAATTGCGTT 2100
GGTTTGGAGG ATATTCCAGA AGGGGAATGG TTCTGCCCAC CTTGCTGTTG TGGTATCTGT 2160
GGTGAAAACA AATTCAAGTA CAATGTTCAG GAACCTAAAG ATTCTCGTCT TCTCAGTTGC 2220
GATCAATGTG AGCGTAAATA TCACATTGGA TGCTTAAGAA ACAAAGGAGT AGTTAAGTTG 2280
AAAAGGAAAG ATCCCAAGGA TAGTTGGTTT TGCAGCAACA AGTGTGAAGA TATATTCATA 2340
GGCCTTCAAA CGCTGTTGGG AAAATCAGTT GTAGTAGGTC CAGATAATCT CACTTGGACA 2400
TTGTGGAAGT TTATGGATTC TGATAGCTGT GATGTTGAGG CCCCGACAGG AAAGCACAGC 2460
AAACTTGATC TTGCTGTTGA GGTGATTCAT GAATGCTTTG AACCAGCGAC TGAAACTTAC 2520
ACAGGAAGAG ACATTGCCGA AGATGTTATT TTTAGCAGAG AATGTAACCT AAATCGCTTG 2580
AACTTTAGGG GATTCTACAC AGTGCTTCTT GAAAGAAACG ATGAGCTAAT AGCTGTGGCT 2640
AATGTGAGGG TTTTCGGAGA TAAGGTGGCA GAGATTCCTC TTGTTGGTAC CAGGTTTCTG 2700
TTCCGTAGGC TTGGAATGTG TAAGATATTG ATGGATGAGC TCGAAAAGCA ACTCATGAAT 2760
TTGGGAGTGG AGAGGTTAAT GCTGCCTGCT GTTCCTAGTG TGCTATACAC CTGGATAAAT 2820
GGTTTTGGGT TCTCAAAGCT GACAGATGCC GAGAAGATGC AATATTTAGA CCACACTTTT 2880
CTGGATTTTC CAGGCACCAT CAAGTGCCAG AAAGTGTTAT TGTAG 2926
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Prp-0127 EMJ08257 Prunus persica 44 3e-150 530
WERAM-Sot-0068 PGSC0003DMT400056775 Solanum tuberosum 45 8e-150 528
WERAM-Sol-0109 Solyc09g031580.2.1 Solanum lycopersicum 44 5e-148 523
WERAM-Thc-0093 EOY15722 Theobroma cacao 44 1e-142 505
WERAM-Met-0088 KEH34313 Medicago truncatula 43 1e-136 485
WERAM-Glm-0016 GLYMA02G39300.2 Glycine max 42 2e-131 467
WERAM-Arl-0028 fgenesh1_pg.C_scaffold_8001866 Arabidopsis lyrata 51 1e-125 448
WERAM-Mua-0147 GSMUA_AchrUn_randomP01500_001 Musa acuminata 32 2e-124 444
WERAM-Amt-0093 ERN04860 Amborella trichopoda 45 1e-110 398
WERAM-Sob-0012 Sb01g038485.1 Sorghum bicolor 36 7e-110 396
WERAM-Sei-0136 Si038769m Setaria italica 37 1e-105 382
WERAM-Tra-0147 Traes_4BL_F428A5CDC.1 Triticum aestivum 37 5e-105 380
WERAM-Aet-0069 EMT23788 Aegilops tauschii 36 2e-102 371
WERAM-Tru-0037 TRIUR3_18780-P1 Triticum urartu 42 2e-101 367
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 41 7e-92 336
WERAM-Viv-0120 VIT_19s0014g01500.t01 Vitis vinifera 39 1e-83 308
WERAM-Zem-0139 GRMZM2G434715_P01 Zea mays 38 3e-83 307
WERAM-Orm-0079 OMERI07G23850.1 Oryza meridionalis 38 2e-82 305
WERAM-Bro-0088 Bo5g005570.1 Brassica oleracea 38 2e-81 301
WERAM-Orb-0084 OBART07G27320.1 Oryza barthii 38 1e-80 298
WERAM-Org-0083 ORGLA07G0217500.1 Oryza glaberrima 38 3e-80 298
WERAM-Orgl-0081 OGLUM07G27340.1 Oryza glumaepatula 38 8e-80 296
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 35 1e-79 295
WERAM-Orr-0087 ORUFI07G28300.1 Oryza rufipogon 38 3e-79 294
WERAM-Art-0134 AT5G36740.1 Arabidopsis thaliana 36 4e-76 283
WERAM-Brr-0136 Bra027290.1-P Brassica rapa 35 3e-75 281
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 39 3e-75 280
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 39 5e-74 276
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 39 8e-74 276
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 39 1e-73 275
WERAM-Orbr-0058 OB04G37750.1 Oryza brachyantha 34 2e-73 275
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 38 5e-73 273
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 34 6e-73 273
WERAM-Hov-0086 MLOC_65889.1 Hordeum vulgare 33 1e-70 266
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 37 8e-57 219
WERAM-Cym-0028 CMR472CT Cyanidioschyzon merolae 44 2e-12 72.4
WERAM-Orc-0212 ENSOCUP00000018080.1 Oryctolagus cuniculus 35 7e-12 70.9
WERAM-Orla-0187 ENSORLP00000021515.1 Oryzias latipes 33 2e-11 68.9
WERAM-Dar-0151 ENSDARP00000014790.7 Danio rerio 39 3e-11 68.6
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 39 4e-11 68.2
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 39 4e-11 68.2
WERAM-Ora-0020 ENSOANP00000002890.2 Ornithorhynchus anatinus 39 4e-11 68.2
WERAM-Gaa-0200 ENSGACP00000024737.1 Gasterosteus aculeatus 39 4e-11 68.2
WERAM-Anp-0142 ENSAPLP00000015426.1 Anas platyrhynchos 48 5e-11 67.8
WERAM-Tar-0001 ENSTRUP00000000282.1 Takifugu rubripes 40 7e-11 67.4
WERAM-Caj-0001 ENSCJAP00000000208.2 Callithrix jacchus 32 7e-11 67.4
WERAM-Orn-0079 ENSONIP00000008816.1 Oreochromis niloticus 39 1e-10 66.6
WERAM-Ten-0050 ENSTNIP00000006981.1 Tetraodon nigroviridis 38 1e-10 66.2
WERAM-Xet-0022 ENSXETP00000006377.3 Xenopus tropicalis 35 2e-10 66.2
WERAM-Leo-0071 ENSLOCP00000009062.1 Lepisosteus oculatus 38 3e-10 65.5
WERAM-Cii-0075 ENSCINP00000035400.1 Ciona intestinalis 53 3e-10 65.1
WERAM-Cis-0034 ENSCSAVP00000007438.1 Ciona savignyi 53 3e-10 65.1
Created Date 25-Jun-2016