WERAM Information

Tag Content
WERAM ID WERAM-Sob-0012
Ensembl Protein ID Sb01g038485.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb01g038485 Sb01g038485.1 Sb01g038485.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.30e-13 50.1 533 776
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt  25 dwfHlkCvklplsslp.egkswyCpsC 50 
                     + H+kC k + s+++ +++ ++C ++
  Sb01g038485.1 533 SAHHGKCRKRKSSPISlDSAPYLCSRH 559
                    678********8888855566***998 PP
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                     iC vC +d+ +   ++ Cd+C+  +H +Cv+l+   +peg +wyCpsC+
  Sb01g038485.1 679 SICSVC-HDGGD---LLLCDNCPSSYHHDCVGLE--AIPEG-NWYCPSCR 721
                    69****.55555...9******************..*****.*******8 PP
        PHD.txt   4 ClvCgkddeg..eke......mvqCdeCddwfHlkCvklp...lsslpegkswyCps 49 
                    C +C+ +d++  +        +v+Cd+C++ +H+ C+  +   l   peg  w+C +
  Sb01g038485.1 722 CSICNLSDYDpdT-SqftektIVYCDQCEREYHVGCTRNSdnqLICRPEG-CWFCSR 776
                    9999855555341.1345556****************9996666777788.8*9975 PP
Protein Sequence
(Fasta)		RKLLFGEFVE VLSCDPGLCG SWHKAVVIGI QENARTVRYT DFIDENGSPL VENVQVSDAI 60
DGKSSMPEEV IRGNVRPMCP HQRLQVSHAS YGLCVDALIE GSYWEGVIAD HAEGSMERKV 120
LFPDEGDECT IEVDQLRLTQ DWDEVTGKWK PRGIWLFLQM LLSHEERDGL PVSVRQIWFD 180
LRSKPSFKTD AKMWMCGTEE FWERSLADLI AELWSLCDKP TLDGYQVEAV FQKNEVETTV 240
LDKLDPSQAL SEYISCYRNN RKDALIKMEL AKENLHLDST SVVHKNARYN PTRMDLALIK 300
NKSNDKWITT PSGSWELVQL DAEFSPQIVS LLASYQDGTT VLQRSIDRTL SVKLKKHLLA 360
LGWSIKFRKD ETMLGNGHHR HITRYRYESP DGKTYVSIIQ VICSLIIGGV KQDIITDRHN 420
YQTAPKGFHS TVSTDLKFLK SAGWNFWLKQ KPGNRLELRY DAPHGKSYNS LVAACKGYLE 480
KGYQEDNDAD TEIANHGSAD GSMHRSKLAR LRDSSTIQGM PAVDRCSNMF TLSAHHGKCR 540
KRKSSPISLD SAPYLCSRHG QIPSSEHRAK TVLSMLVKKK IVVPGDKVTY KQSDGPGIKE 600
GSIRRDGIKC MCCNEIFTVE NFEVHAGSST PLPSAHMFLK DGMSLSQCLV EFMGGNKPRD 660
PHPLHARLKG KNSDLESDSI CSVCHDGGDL LLCDNCPSSY HHDCVGLEAI PEGNWYCPSC 720
RCSICNLSDY DPDTSQFTEK TIVYCDQCER EYHVGCTRNS DNQLICRPEG CWFCSRGCSN 780
VFQHLQELIG KSVPTPIEGV SWTILKFCSG NGSDHGDYDD EIMADHYGKL CVAVGILHEC 840
FVTIIEPRTQ SDISEDIVFN RESELRRLNF RGFYTILLQK GGEPISVGTF RICGQKFAEL 900
PLIGTSSPYR RQGMCRLLIN ELEKLLLDLG VERLILPAVP ELLETWTCSF GFTIMSNSDR 960
LELAGNSILS FQGTTMCQKI L 981
Nucleotide Sequence
(Fasta)		AGGAAGCTCC TCTTCGGCGA GTTCGTCGAG GTGTTGAGTT GTGATCCAGG GCTATGTGGC 60
TCCTGGCATA AGGCTGTTGT TATTGGTATT CAGGAAAATG CTCGCACCGT AAGATATACT 120
GATTTCATTG ATGAAAATGG ATCACCGCTT GTTGAGAATG TTCAAGTGTC AGATGCCATT 180
GATGGCAAGT CAAGCATGCC TGAGGAAGTC ATTCGTGGCA ATGTTAGGCC AATGTGTCCA 240
CATCAACGGC TGCAGGTATC TCATGCAAGC TATGGACTCT GTGTTGATGC ACTCATAGAA 300
GGTTCCTACT GGGAAGGTGT TATTGCTGAT CATGCTGAAG GCTCTATGGA AAGGAAAGTC 360
CTTTTCCCTG ATGAAGGTGA TGAATGCACT ATCGAAGTTG ATCAGCTACG TCTTACTCAA 420
GACTGGGATG AAGTTACAGG GAAATGGAAA CCACGTGGAA TCTGGTTGTT TCTGCAGATG 480
CTATTGTCAC ATGAAGAGAG AGATGGTTTA CCTGTGTCAG TCAGGCAGAT ATGGTTTGAC 540
TTAAGATCCA AACCTTCTTT TAAGACTGAT GCCAAAATGT GGATGTGTGG AACAGAAGAA 600
TTTTGGGAGA GATCACTTGC AGATCTCATT GCTGAATTGT GGTCTCTATG TGACAAGCCT 660
ACCCTAGATG GATATCAAGT GGAAGCAGTA TTTCAGAAGA ACGAAGTTGA GACCACTGTC 720
TTGGATAAGC TGGATCCATC CCAAGCATTA TCAGAATATA TATCATGCTA TCGCAATAAT 780
AGGAAAGATG CTCTCATAAA AATGGAGTTG GCAAAAGAAA ATTTGCATCT AGACAGTACT 840
AGTGTGGTGC ACAAGAATGC ACGCTACAAC CCGACGCGCA TGGATCTTGC CTTGATAAAG 900
AACAAGTCGA ATGATAAATG GATCACGACT CCATCAGGAT CTTGGGAGTT GGTTCAACTC 960
GATGCTGAAT TTTCCCCACA GATAGTTTCT CTTCTTGCTA GTTACCAAGA TGGCACTACT 1020
GTTCTACAGA GGAGCATTGA CAGAACTCTG AGTGTGAAGC TGAAGAAGCA TCTACTGGCA 1080
TTGGGTTGGA GTATTAAGTT CAGAAAAGAT GAAACTATGC TAGGAAATGG CCATCACAGA 1140
CATATTACGA GATACCGATA TGAGTCACCT GATGGGAAGA CTTATGTTTC TATCATTCAG 1200
GTAATATGCA GCTTGATAAT TGGAGGCGTT AAACAAGATA TAATAACTGA CAGACACAAC 1260
TATCAGACAG CACCAAAAGG TTTTCATTCG ACAGTGTCAA CTGACCTGAA GTTTCTCAAA 1320
TCTGCTGGAT GGAATTTTTG GTTAAAGCAA AAGCCTGGAA ACAGACTGGA GTTGAGGTAT 1380
GATGCTCCAC ATGGCAAGTC TTACAACTCT CTAGTGGCAG CATGTAAGGG TTACCTGGAA 1440
AAAGGATATC AGGAGGACAA CGACGCAGAC ACTGAAATCG CCAACCATGG TTCTGCTGAT 1500
GGTTCTATGC ATCGATCAAA ATTGGCACGA CTAAGGGATT CAAGTACAAT ACAGGGTATG 1560
CCTGCAGTGG ACAGATGTAG CAACATGTTT ACCTTGTCTG CACATCATGG AAAGTGTAGG 1620
AAAAGAAAAT CATCTCCAAT TTCTTTGGAC AGTGCACCAT ATCTTTGTTC AAGACATGGA 1680
CAGATTCCTT CAAGTGAGCA TCGTGCGAAG ACAGTTTTGT CTATGTTGGT AAAGAAAAAA 1740
ATTGTGGTAC CAGGGGATAA GGTTACATAT AAGCAAAGTG ATGGACCTGG GATAAAGGAA 1800
GGTTCCATCC GCAGAGATGG AATAAAATGC ATGTGTTGCA ATGAAATATT CACTGTGGAG 1860
AATTTTGAGG TTCATGCTGG GAGCAGTACA CCATTACCTT CGGCTCATAT GTTTTTAAAG 1920
GATGGAATGT CCCTATCACA GTGTTTGGTT GAATTCATGG GTGGAAACAA GCCCAGAGAT 1980
CCACATCCAC TGCATGCGCG CTTGAAGGGA AAAAATTCTG ATCTGGAAAG TGATTCGATA 2040
TGCTCTGTGT GCCATGATGG TGGGGATTTA TTACTTTGTG ACAATTGCCC ATCATCTTAT 2100
CATCATGACT GTGTCGGTTT GGAGGCCATT CCGGAAGGCA ACTGGTATTG CCCATCCTGC 2160
AGATGCAGTA TTTGTAACTT GAGTGATTAT GATCCTGATA CCAGCCAATT CACTGAGAAG 2220
ACCATAGTTT ACTGTGATCA GTGTGAACGG GAATATCATG TCGGTTGCAC TAGAAATAGT 2280
GACAATCAGC TTATCTGCCG ACCAGAAGGT TGTTGGTTTT GCAGCAGGGG ATGCTCAAAT 2340
GTATTTCAAC ATTTGCAAGA ACTCATTGGG AAATCAGTTC CAACTCCAAT CGAAGGCGTA 2400
TCTTGGACTA TCTTGAAATT TTGTAGTGGG AACGGCAGTG ACCATGGTGA TTATGATGAT 2460
GAGATAATGG CAGACCATTA TGGCAAGTTG TGCGTTGCAG TTGGTATTCT TCATGAATGC 2520
TTTGTTACTA TTATCGAGCC TCGCACACAG AGTGATATTT CTGAGGATAT TGTCTTCAAT 2580
AGAGAATCAG AACTCAGACG ACTAAATTTT AGGGGATTCT ACACAATACT TCTCCAGAAA 2640
GGTGGTGAAC CAATATCTGT CGGCACTTTT AGGATTTGCG GCCAGAAGTT TGCCGAGCTG 2700
CCTCTGATCG GTACAAGTTC TCCATACCGT CGCCAAGGAA TGTGCCGACT TCTAATTAAT 2760
GAACTGGAAA AGTTGCTTTT AGACTTGGGG GTGGAAAGAC TTATATTACC GGCAGTTCCT 2820
GAACTTTTGG AAACATGGAC ATGCTCATTT GGTTTCACAA TTATGTCAAA TTCTGATAGG 2880
CTTGAGTTGG CAGGGAATAG CATTCTCAGT TTCCAGGGAA CCACCATGTG TCAGAAGATT 2940
TTA 2944
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0136 Si038769m Setaria italica 71 0.0 1534
WERAM-Tra-0147 Traes_4BL_F428A5CDC.1 Triticum aestivum 59 0.0 1159
WERAM-Aet-0069 EMT23788 Aegilops tauschii 58 0.0 1123
WERAM-Tru-0037 TRIUR3_18780-P1 Triticum urartu 58 0.0 1092
WERAM-Hov-0067 MLOC_58085.2 Hordeum vulgare 53 0.0 934
WERAM-Mua-0099 GSMUA_Achr6P32880_001 Musa acuminata 40 0.0 652
WERAM-Met-0133 AES98667 Medicago truncatula 34 9e-149 525
WERAM-Sol-0109 Solyc09g031580.2.1 Solanum lycopersicum 40 3e-112 404
WERAM-Amt-0093 ERN04860 Amborella trichopoda 49 4e-111 400
WERAM-Sot-0068 PGSC0003DMT400056775 Solanum tuberosum 40 6e-111 399
WERAM-Orm-0079 OMERI07G23850.1 Oryza meridionalis 37 1e-108 392
WERAM-Zem-0139 GRMZM2G434715_P01 Zea mays 47 2e-104 377
WERAM-Orb-0084 OBART07G27320.1 Oryza barthii 42 3e-103 374
WERAM-Org-0083 ORGLA07G0217500.1 Oryza glaberrima 42 1e-102 372
WERAM-Orr-0087 ORUFI07G28300.1 Oryza rufipogon 42 3e-102 370
WERAM-Orgl-0081 OGLUM07G27340.1 Oryza glumaepatula 41 3e-101 367
WERAM-Prp-0127 EMJ08257 Prunus persica 47 3e-101 367
WERAM-Glm-0132 GLYMA11G27510.1 Glycine max 39 1e-97 355
WERAM-Pot-0028 POPTR_0002s11940.1 Populus trichocarpa 37 4e-96 350
WERAM-Thc-0093 EOY15722 Theobroma cacao 38 6e-96 349
WERAM-Lep-0083 LPERR07G24100.1 Leersia perrieri 39 3e-90 330
WERAM-Arl-0028 fgenesh1_pg.C_scaffold_8001866 Arabidopsis lyrata 43 8e-90 329
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 44 6e-88 323
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 35 1e-78 292
WERAM-Viv-0024 VIT_05s0020g03420.t01 Vitis vinifera 38 5e-74 276
WERAM-Bro-0100 Bo5g127560.1 Brassica oleracea 35 1e-69 262
WERAM-Art-0071 AT3G14980.1 Arabidopsis thaliana 35 5e-69 260
WERAM-Brr-0136 Bra027290.1-P Brassica rapa 35 3e-68 258
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 39 3e-68 258
WERAM-Orbr-0058 OB04G37750.1 Oryza brachyantha 36 8e-68 256
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 36 3e-67 254
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 38 7e-67 253
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 38 9e-67 253
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 38 1e-66 252
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 40 3e-55 214
WERAM-Ora-0020 ENSOANP00000002890.2 Ornithorhynchus anatinus 32 3e-12 72.0
WERAM-Orla-0061 ENSORLP00000007931.1 Oryzias latipes 28 3e-11 68.6
WERAM-Cym-0028 CMR472CT Cyanidioschyzon merolae 53 4e-11 68.2
WERAM-Ten-0050 ENSTNIP00000006981.1 Tetraodon nigroviridis 32 4e-11 68.2
WERAM-Xet-0022 ENSXETP00000006377.3 Xenopus tropicalis 29 1e-10 67.0
WERAM-Drm-0021 FBpp0074766 Drosophila melanogaster 43 1e-10 66.6
WERAM-Gaa-0200 ENSGACP00000024737.1 Gasterosteus aculeatus 51 1e-10 66.6
WERAM-Cae-0002 T14G8.1 Caenorhabditis elegans 33 1e-10 66.6
WERAM-Cii-0075 ENSCINP00000035400.1 Ciona intestinalis 55 2e-10 65.9
WERAM-Orc-0212 ENSOCUP00000018080.1 Oryctolagus cuniculus 34 2e-10 65.9
WERAM-Cis-0034 ENSCSAVP00000007438.1 Ciona savignyi 58 2e-10 65.5
WERAM-Orn-0079 ENSONIP00000008816.1 Oreochromis niloticus 51 3e-10 65.5
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 49 4e-10 64.7
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 49 4e-10 64.7
Created Date 25-Jun-2016